Definition Shewanella amazonensis SB2B chromosome, complete genome.
Accession NC_008700
Length 4,306,142

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The map label for this gene is 119775343

Identifier: 119775343

GI number: 119775343

Start: 2669558

End: 2669785

Strand: Direct

Name: 119775343

Synonym: Sama_2208

Alternate gene names: NA

Gene position: 2669558-2669785 (Clockwise)

Preceding gene: 119775341

Following gene: 119775344

Centisome position: 61.99

GC content: 53.07

Gene sequence:

>228_bases
ATGGCCAACGTCAGTCAATCCGCTTCGCTGGACAGCATCGCCGCTTATCTCAAGCGCCTGCACGGCTGCGATCAGGATAC
AGCACTTAAAGAAGCCAGAGAGGTCTTGCATAACCTGATGGCCATGAGGCAAAAGGGATTTATTAACGGCTGGTATTTTG
ATGAGCGCGGGCACCTCGAACTGCTGCCGAGTGATGCCGTACAAAAACACCTCTCGCCGCCGAAATAA

Upstream 100 bases:

>100_bases
CATGAAATCCGCCCCGCTTATTCGACAATAGACTGAGCCCTGTTTAGGGCTGTCGGTACTTTTATTCTATGCTCAGTGAA
GATAATGACAGGAATATCCC

Downstream 100 bases:

>100_bases
GCCCACCTTTTTAAACGGTGCAGCTGTCTCCTTCCGATGCGCAATTTGGGTGGATTTCCACCCATCCAGGATTTTAGTGT
GAGCGGCTACTCACCCACAC

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 75; Mature: 74

Protein sequence:

>75_residues
MANVSQSASLDSIAAYLKRLHGCDQDTALKEAREVLHNLMAMRQKGFINGWYFDERGHLELLPSDAVQKHLSPPK

Sequences:

>Translated_75_residues
MANVSQSASLDSIAAYLKRLHGCDQDTALKEAREVLHNLMAMRQKGFINGWYFDERGHLELLPSDAVQKHLSPPK
>Mature_74_residues
ANVSQSASLDSIAAYLKRLHGCDQDTALKEAREVLHNLMAMRQKGFINGWYFDERGHLELLPSDAVQKHLSPPK

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 8450; Mature: 8319

Theoretical pI: Translated: 7.68; Mature: 7.68

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.3 %Cys     (Translated Protein)
4.0 %Met     (Translated Protein)
5.3 %Cys+Met (Translated Protein)
1.4 %Cys     (Mature Protein)
2.7 %Met     (Mature Protein)
4.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MANVSQSASLDSIAAYLKRLHGCDQDTALKEAREVLHNLMAMRQKGFINGWYFDERGHLE
CCCCCCCCCHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHCCCCCCEEECCCCCEE
LLPSDAVQKHLSPPK
ECCCHHHHHCCCCCC
>Mature Secondary Structure 
ANVSQSASLDSIAAYLKRLHGCDQDTALKEAREVLHNLMAMRQKGFINGWYFDERGHLE
CCCCCCCCHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHCCCCCCEEECCCCCEE
LLPSDAVQKHLSPPK
ECCCHHHHHCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA