Click here to switch to the map view.

The map label for this gene is 119775331

Identifier: 119775331

GI number: 119775331

Start: 2654736

End: 2655248

Strand: Direct

Name: 119775331

Synonym: Sama_2196

Alternate gene names: NA

Gene position: 2654736-2655248 (Clockwise)

Preceding gene: 119775330

Following gene: 119775332

Centisome position: 61.65

GC content: 53.8

Gene sequence:

>513_bases
ATGAATGACGCCCCCGCTCCTCGCAGTAAAACCAAACGCCTGCTGGTCGAAGCCCTGATAGCTATTGGGCTTTTTTACGG
TATTTCGGCTTATTTTCAAAAAGATATGCTGAAAGACACCGCGCCTGTCATTGCCGCCAAAGGGGTCAACGGCACCAGCC
TGTCGCTGCCTTCCGCCACAGGTAAACCCACACTGGTGTATTTTTTTGCAAGCTGGTGCGGTGCCTGCAAGCTCACCTCG
CCAGCGGTCGACAACATAGCCGGAGATTATCCGGTACTGGCCATCGCTGCCGACTCGGGCAGTGATACAGACGTGATAGC
CTTCCTCAAAGAAAAAGGCTATGGATTCGACGCAATCAATGACAAGGGCACGCTTACAACGCATTTCGGTGTAAGCGGTT
TTCCATCCCTGTATGTGGTGGATGCCAGGGGCGAAGTACGTTTCGTTACCCGGGGTGTGAGTACGGAACCCGCTCTCAGA
GCACGGCTTTTCCTCACCGAACTGCTGCAATAG

Upstream 100 bases:

>100_bases
GCTCGACATGGAGTTGGAGATTGCGTTTCGCACCCTGTATCCGCAGCTGATGGCTTATTCCAGACGTCTGGCCCGCACCA
CACCAGAGCAATACCTGTAA

Downstream 100 bases:

>100_bases
CCGTTGAAACTTCGTAGAATGCGCCACTCAACCCCAAGTGTGCGCCAACGAAGGAGGCCTGATGGAGATTTTTGACTACC
GCCCCCCGGCAGTCCCCTGG

Product: thioredoxin

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 170; Mature: 170

Protein sequence:

>170_residues
MNDAPAPRSKTKRLLVEALIAIGLFYGISAYFQKDMLKDTAPVIAAKGVNGTSLSLPSATGKPTLVYFFASWCGACKLTS
PAVDNIAGDYPVLAIAADSGSDTDVIAFLKEKGYGFDAINDKGTLTTHFGVSGFPSLYVVDARGEVRFVTRGVSTEPALR
ARLFLTELLQ

Sequences:

>Translated_170_residues
MNDAPAPRSKTKRLLVEALIAIGLFYGISAYFQKDMLKDTAPVIAAKGVNGTSLSLPSATGKPTLVYFFASWCGACKLTS
PAVDNIAGDYPVLAIAADSGSDTDVIAFLKEKGYGFDAINDKGTLTTHFGVSGFPSLYVVDARGEVRFVTRGVSTEPALR
ARLFLTELLQ
>Mature_170_residues
MNDAPAPRSKTKRLLVEALIAIGLFYGISAYFQKDMLKDTAPVIAAKGVNGTSLSLPSATGKPTLVYFFASWCGACKLTS
PAVDNIAGDYPVLAIAADSGSDTDVIAFLKEKGYGFDAINDKGTLTTHFGVSGFPSLYVVDARGEVRFVTRGVSTEPALR
ARLFLTELLQ

Specific function: Unknown

COG id: COG0526

COG function: function code OC; Thiol-disulfide isomerase and thioredoxins

Gene ontology:

Cell location: Cell membrane; Single-pass membrane protein (Potential) [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Contains 1 thioredoxin domain [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000866
- InterPro:   IPR005746
- InterPro:   IPR017936
- InterPro:   IPR012336
- InterPro:   IPR017937
- InterPro:   IPR012335 [H]

Pfam domain/function: PF00578 AhpC-TSA [H]

EC number: NA

Molecular weight: Translated: 18073; Mature: 18073

Theoretical pI: Translated: 8.18; Mature: 8.18

Prosite motif: PS00138 SUBTILASE_SER ; PS00194 THIOREDOXIN

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.2 %Cys     (Translated Protein)
1.2 %Met     (Translated Protein)
2.4 %Cys+Met (Translated Protein)
1.2 %Cys     (Mature Protein)
1.2 %Met     (Mature Protein)
2.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNDAPAPRSKTKRLLVEALIAIGLFYGISAYFQKDMLKDTAPVIAAKGVNGTSLSLPSAT
CCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEECCCCCCEEECCCCC
GKPTLVYFFASWCGACKLTSPAVDNIAGDYPVLAIAADSGSDTDVIAFLKEKGYGFDAIN
CCCEEEEEEHHHHCCCCCCCCCHHHCCCCCCEEEEEECCCCCCCEEEEEECCCCCCCCCC
DKGTLTTHFGVSGFPSLYVVDARGEVRFVTRGVSTEPALRARLFLTELLQ
CCCCEEEECCCCCCCCEEEEECCCCEEEEECCCCCCHHHHHHHHHHHHCC
>Mature Secondary Structure
MNDAPAPRSKTKRLLVEALIAIGLFYGISAYFQKDMLKDTAPVIAAKGVNGTSLSLPSAT
CCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEECCCCCCEEECCCCC
GKPTLVYFFASWCGACKLTSPAVDNIAGDYPVLAIAADSGSDTDVIAFLKEKGYGFDAIN
CCCEEEEEEHHHHCCCCCCCCCHHHCCCCCCEEEEEECCCCCCCEEEEEECCCCCCCCCC
DKGTLTTHFGVSGFPSLYVVDARGEVRFVTRGVSTEPALRARLFLTELLQ
CCCCEEEECCCCCCCCEEEEECCCCEEEEECCCCCCHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 7542800 [H]