Definition Shewanella amazonensis SB2B chromosome, complete genome.
Accession NC_008700
Length 4,306,142

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The map label for this gene is yaeQ [H]

Identifier: 119775321

GI number: 119775321

Start: 2645717

End: 2646256

Strand: Reverse

Name: yaeQ [H]

Synonym: Sama_2186

Alternate gene names: 119775321

Gene position: 2646256-2645717 (Counterclockwise)

Preceding gene: 119775322

Following gene: 119775303

Centisome position: 61.45

GC content: 54.63

Gene sequence:

>540_bases
ATGACGCTTAAGTCCGATGTCCATAAAGTCAGCTTTGAGATTGCCGATCTGCGCCGTGGCTACTTTGGCTATCACAAACT
GACACTGGCACGGCATCCATCCGAGACCGAGCAGCGATTGATGCTGAGACTGCTGGCCTTTGCACTCTATGCCTCGGCCG
AGCTTAAATTTGTCGGTGAGCTGTGTAATCAGGACGAGCCCGAGCTCTGTGAACAGGCGCTGGATGGTCGTTATCTGTTT
TGGGCAGAATTTGGTCTGGCGGATGAGCGGCGGATAAAGCGCGCTGTCCACCGGGCCGATAAGGTGGTCGTGTTCGCCTA
CGGCGGGCAGGATTTAGCTCATTGGTGGGATGATATGGCAGGAAAATGCACCCGAATCGACAGCCTGTCTGTGCTCGCGT
TTGATAATCCAAGCCTGGAGACCCTGTTGCCCTTCGTGGCCAAAACCATGGCGCTGGCGGTCAATATCGATGAGGATGGC
AGCGTGAGAATATCCAATGGTCAATACGACGTGGTGGTTGTCCCCCGGGTTCTCAAATAG

Upstream 100 bases:

>100_bases
GGTATACGCTGATTCGGCCCAGATAAAGGCGCTGCGGGCCCATTTCCCTCAGGCCAGGCATCTGAGGCCTGGCGCGCTTT
AACGCCGTTTCGTCATCGCC

Downstream 100 bases:

>100_bases
CGCTATTCAATCGCCTCGGCAGAACACGGCGTATCTTAACATTGCGGTATTTACAGACTGAATATCCCATCAATAAAAAA
GGAGCCTCAAGGCTCCTTTT

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 179; Mature: 178

Protein sequence:

>179_residues
MTLKSDVHKVSFEIADLRRGYFGYHKLTLARHPSETEQRLMLRLLAFALYASAELKFVGELCNQDEPELCEQALDGRYLF
WAEFGLADERRIKRAVHRADKVVVFAYGGQDLAHWWDDMAGKCTRIDSLSVLAFDNPSLETLLPFVAKTMALAVNIDEDG
SVRISNGQYDVVVVPRVLK

Sequences:

>Translated_179_residues
MTLKSDVHKVSFEIADLRRGYFGYHKLTLARHPSETEQRLMLRLLAFALYASAELKFVGELCNQDEPELCEQALDGRYLF
WAEFGLADERRIKRAVHRADKVVVFAYGGQDLAHWWDDMAGKCTRIDSLSVLAFDNPSLETLLPFVAKTMALAVNIDEDG
SVRISNGQYDVVVVPRVLK
>Mature_178_residues
TLKSDVHKVSFEIADLRRGYFGYHKLTLARHPSETEQRLMLRLLAFALYASAELKFVGELCNQDEPELCEQALDGRYLFW
AEFGLADERRIKRAVHRADKVVVFAYGGQDLAHWWDDMAGKCTRIDSLSVLAFDNPSLETLLPFVAKTMALAVNIDEDGS
VRISNGQYDVVVVPRVLK

Specific function: Unknown

COG id: COG4681

COG function: function code S; Uncharacterized protein conserved in bacteria

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

Organism=Escherichia coli, GI1786388, Length=176, Percent_Identity=40.3409090909091, Blast_Score=126, Evalue=6e-31,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR009822 [H]

Pfam domain/function: PF07152 YaeQ [H]

EC number: NA

Molecular weight: Translated: 20323; Mature: 20191

Theoretical pI: Translated: 6.02; Mature: 6.02

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.7 %Cys     (Translated Protein)
2.2 %Met     (Translated Protein)
3.9 %Cys+Met (Translated Protein)
1.7 %Cys     (Mature Protein)
1.7 %Met     (Mature Protein)
3.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTLKSDVHKVSFEIADLRRGYFGYHKLTLARHPSETEQRLMLRLLAFALYASAELKFVGE
CCCCHHHHHHHHHHHHHHCCCCCCEEEEEECCCCHHHHHHHHHHHHHHHHHCCHHHHHHH
LCNQDEPELCEQALDGRYLFWAEFGLADERRIKRAVHRADKVVVFAYGGQDLAHWWDDMA
HHCCCCHHHHHHHHCCCEEEEEECCCCHHHHHHHHHHHCCEEEEEEECCCHHHHHHHHHC
GKCTRIDSLSVLAFDNPSLETLLPFVAKTMALAVNIDEDGSVRISNGQYDVVVVPRVLK
CCEEEECCEEEEEECCCCHHHHHHHHHHHHHEEEEECCCCCEEECCCCEEEEECCCCCC
>Mature Secondary Structure 
TLKSDVHKVSFEIADLRRGYFGYHKLTLARHPSETEQRLMLRLLAFALYASAELKFVGE
CCCHHHHHHHHHHHHHHCCCCCCEEEEEECCCCHHHHHHHHHHHHHHHHHCCHHHHHHH
LCNQDEPELCEQALDGRYLFWAEFGLADERRIKRAVHRADKVVVFAYGGQDLAHWWDDMA
HHCCCCHHHHHHHHCCCEEEEEECCCCHHHHHHHHHHHCCEEEEEEECCCHHHHHHHHHC
GKCTRIDSLSVLAFDNPSLETLLPFVAKTMALAVNIDEDGSVRISNGQYDVVVVPRVLK
CCEEEECCEEEEEECCCCHHHHHHHHHHHHHEEEEECCCCCEEECCCCEEEEECCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9278503 [H]