| Definition | Shewanella amazonensis SB2B chromosome, complete genome. |
|---|---|
| Accession | NC_008700 |
| Length | 4,306,142 |
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The map label for this gene is sixA [H]
Identifier: 119775297
GI number: 119775297
Start: 2611555
End: 2612025
Strand: Reverse
Name: sixA [H]
Synonym: Sama_2162
Alternate gene names: 119775297
Gene position: 2612025-2611555 (Counterclockwise)
Preceding gene: 119775301
Following gene: 119775295
Centisome position: 60.66
GC content: 51.8
Gene sequence:
>471_bases ATGCAGCTATTTTTGATGAGACATGGTGAGGCGGGTTATCAGGCCCAATCCGACAGAGACCGTACCCTTACCGATACCGG GCGTTATCATACCCGGCTCATGAGTAACTTTTTGAATCGTCTCGTTACCGATTTTGACTTGGTGTTGGTCAGCCCTTATT TACGGGCGCAACAGACCTGGCAGGAAGTTGCCACCCATTTCCCTGAACCGCGTAAGTGGGTTACGGCCGATGAATTGGTG CCTTCAGCCGATCCGGCGACAGCAGCGAGTCTTATCCTGGCGTATGCCGAGCAATACAAGGCGGATAAGGTGCTGGTGAT TTCGCACATGCCACTGCTGGGATATCTGGTGAGTGAATTGGTGGCGGGAACCGAGCCGCCGCTGTTTGCTACTTCAGGTA TATGCTTGCTGGATAAACATGCTGAGCAATGTCATCAGGTGTGGATGCATAATCCTCATACTATCAGCTGA
Upstream 100 bases:
>100_bases CGTGGGACTGTCGACTAAAGATTAACGCTTTTTCAGTTTGTCACCGTATCAATTCGGGCTACAATTGGCGCGAAATAACA GTAGAGGCGGCAAAAGAAGT
Downstream 100 bases:
>100_bases GCATTGCACATCATTCTGAAGGCAATATTTATCGAGCAAAGCAGCCATCCGGCTGCTTTTTTGTTGATAAGGCCCTGAGT CTGGGTTGCTGATTGAGCTT
Product: putative phosphohistidine phosphatase, SixA
Products: NA
Alternate protein names: RX6 [H]
Number of amino acids: Translated: 156; Mature: 156
Protein sequence:
>156_residues MQLFLMRHGEAGYQAQSDRDRTLTDTGRYHTRLMSNFLNRLVTDFDLVLVSPYLRAQQTWQEVATHFPEPRKWVTADELV PSADPATAASLILAYAEQYKADKVLVISHMPLLGYLVSELVAGTEPPLFATSGICLLDKHAEQCHQVWMHNPHTIS
Sequences:
>Translated_156_residues MQLFLMRHGEAGYQAQSDRDRTLTDTGRYHTRLMSNFLNRLVTDFDLVLVSPYLRAQQTWQEVATHFPEPRKWVTADELV PSADPATAASLILAYAEQYKADKVLVISHMPLLGYLVSELVAGTEPPLFATSGICLLDKHAEQCHQVWMHNPHTIS >Mature_156_residues MQLFLMRHGEAGYQAQSDRDRTLTDTGRYHTRLMSNFLNRLVTDFDLVLVSPYLRAQQTWQEVATHFPEPRKWVTADELV PSADPATAASLILAYAEQYKADKVLVISHMPLLGYLVSELVAGTEPPLFATSGICLLDKHAEQCHQVWMHNPHTIS
Specific function: Exhibits phosphohistidine phosphatase activity towards the HPt domain of the ArcB sensor involved in the multistep His- Asp phosphorelay [H]
COG id: COG2062
COG function: function code T; Phosphohistidine phosphatase SixA
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the sixA phosphatase family [H]
Homologues:
Organism=Escherichia coli, GI1788681, Length=134, Percent_Identity=44.7761194029851, Blast_Score=111, Evalue=2e-26,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR013078 - InterPro: IPR004449 [H]
Pfam domain/function: PF00300 PGAM [H]
EC number: 3.1.3.- [C]
Molecular weight: Translated: 17663; Mature: 17663
Theoretical pI: Translated: 6.30; Mature: 6.30
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.3 %Cys (Translated Protein) 3.2 %Met (Translated Protein) 4.5 %Cys+Met (Translated Protein) 1.3 %Cys (Mature Protein) 3.2 %Met (Mature Protein) 4.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MQLFLMRHGEAGYQAQSDRDRTLTDTGRYHTRLMSNFLNRLVTDFDLVLVSPYLRAQQTW CEEEEEECCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH QEVATHFPEPRKWVTADELVPSADPATAASLILAYAEQYKADKVLVISHMPLLGYLVSEL HHHHHHCCCCCCCCCHHHCCCCCCHHHHHHHHHHHHHHHCCCCEEEEECCCHHHHHHHHH VAGTEPPLFATSGICLLDKHAEQCHQVWMHNPHTIS HCCCCCCCEECCCCCEEHHHHHHHHHHHCCCCCCCC >Mature Secondary Structure MQLFLMRHGEAGYQAQSDRDRTLTDTGRYHTRLMSNFLNRLVTDFDLVLVSPYLRAQQTW CEEEEEECCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH QEVATHFPEPRKWVTADELVPSADPATAASLILAYAEQYKADKVLVISHMPLLGYLVSEL HHHHHHCCCCCCCCCHHHCCCCCCHHHHHHHHHHHHHHHCCCCEEEEECCCHHHHHHHHH VAGTEPPLFATSGICLLDKHAEQCHQVWMHNPHTIS HCCCCCCCEECCCCCEEHHHHHHHHHHHCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 9489669; 9205837; 9278503 [H]