| Definition | Shewanella amazonensis SB2B chromosome, complete genome. |
|---|---|
| Accession | NC_008700 |
| Length | 4,306,142 |
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The map label for this gene is ispZ
Identifier: 119775272
GI number: 119775272
Start: 2583191
End: 2583736
Strand: Direct
Name: ispZ
Synonym: Sama_2137
Alternate gene names: 119775272
Gene position: 2583191-2583736 (Clockwise)
Preceding gene: 119775270
Following gene: 119775273
Centisome position: 59.99
GC content: 48.72
Gene sequence:
>546_bases ATGAAACAGCTGCTCGATTTTTTACCGCTTCTGGTCTTTTTCGCCGTTTACAAGTTTTTTGATATTTATGCCGCCACCGG CGCCCTGATTGTTGCGACGCTCATCCAGCTTATCGCCACCTACGCGCTGTATAAAAAAATCGAAAAAATGCACCTGATCA CCTTTGCCCTGGTAGCCAGCTTCGGTACTGCTACCCTGATTTTCCACGATGATGCTTTTATCAAGTGGAAGGTGACCATA GTCTATGCCCTGTTCGCCATCGCCCTCATTGCCGGGCAGTTTTTAGGAAAGCCCATTCTCAAATCCATGCTCGGCCAGGA AATGCCAGTGGACGATAAGATTTGGGCCAGACTCACCTGGTACTGGGTGCTGTTTTTTGTCGCCTGTGGGCTTATCAACA TCTATGTGGCTTTCAGCCTGTCCCAGGAAACCTGGGTGAACTTCAAGGTATTCGGGCTGACCGCCGCCACCCTCGTGAAC ACACTGCTTACCGTGGTTTACCTGTTCAAACATCTTCCCGAAGATAAAAAGAAGGAACTCAAATAA
Upstream 100 bases:
>100_bases CCAGCGGCCAATCCCCATGTTACACTCGGTTTCTCGCTGACGGCACAACACAAGCTTGCAGGCCGTCAAAGGCTTACACT TTGGGACTTCACAGGACGCC
Downstream 100 bases:
>100_bases TGTGGTACATGATTTCATCCCAGGACGTTGCCAACAGTCTCGAAAAACGCCTTGCGGCCCGGCCAGCTCACCTTGCTCGC CTTCAGGAGCTCGCCGATGA
Product: intracellular septation protein A
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 181; Mature: 181
Protein sequence:
>181_residues MKQLLDFLPLLVFFAVYKFFDIYAATGALIVATLIQLIATYALYKKIEKMHLITFALVASFGTATLIFHDDAFIKWKVTI VYALFAIALIAGQFLGKPILKSMLGQEMPVDDKIWARLTWYWVLFFVACGLINIYVAFSLSQETWVNFKVFGLTAATLVN TLLTVVYLFKHLPEDKKKELK
Sequences:
>Translated_181_residues MKQLLDFLPLLVFFAVYKFFDIYAATGALIVATLIQLIATYALYKKIEKMHLITFALVASFGTATLIFHDDAFIKWKVTI VYALFAIALIAGQFLGKPILKSMLGQEMPVDDKIWARLTWYWVLFFVACGLINIYVAFSLSQETWVNFKVFGLTAATLVN TLLTVVYLFKHLPEDKKKELK >Mature_181_residues MKQLLDFLPLLVFFAVYKFFDIYAATGALIVATLIQLIATYALYKKIEKMHLITFALVASFGTATLIFHDDAFIKWKVTI VYALFAIALIAGQFLGKPILKSMLGQEMPVDDKIWARLTWYWVLFFVACGLINIYVAFSLSQETWVNFKVFGLTAATLVN TLLTVVYLFKHLPEDKKKELK
Specific function: Involved in cell division; probably involved in intracellular septation
COG id: COG2917
COG function: function code D; Intracellular septation protein A
Gene ontology:
Cell location: Cell inner membrane; Multi-pass membrane protein
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the ispZ family
Homologues:
Organism=Escherichia coli, GI1787507, Length=179, Percent_Identity=57.5418994413408, Blast_Score=212, Evalue=1e-56,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): ISPZ_SHEAM (A1S7I6)
Other databases:
- EMBL: CP000507 - RefSeq: YP_928012.1 - STRING: A1S7I6 - GeneID: 4604387 - GenomeReviews: CP000507_GR - KEGG: saz:Sama_2137 - NMPDR: fig|326297.7.peg.2007 - eggNOG: COG2917 - HOGENOM: HBG663014 - OMA: HDETFIK - PhylomeDB: A1S7I6 - ProtClustDB: PRK00259 - HAMAP: MF_00189 - InterPro: IPR006008 - TIGRFAMs: TIGR00997
Pfam domain/function: PF04279 IspA
EC number: NA
Molecular weight: Translated: 20662; Mature: 20662
Theoretical pI: Translated: 9.65; Mature: 9.65
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
HASH(0x144ac934)-; HASH(0x1398c870)-; HASH(0x14a2b014)-; HASH(0x145bdec0)-; HASH(0x1407ad10)-;
Cys/Met content:
0.6 %Cys (Translated Protein) 2.2 %Met (Translated Protein) 2.8 %Cys+Met (Translated Protein) 0.6 %Cys (Mature Protein) 2.2 %Met (Mature Protein) 2.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKQLLDFLPLLVFFAVYKFFDIYAATGALIVATLIQLIATYALYKKIEKMHLITFALVAS CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH FGTATLIFHDDAFIKWKVTIVYALFAIALIAGQFLGKPILKSMLGQEMPVDDKIWARLTW CCCEEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHCCCCCCCCHHHHHHHHH YWVLFFVACGLINIYVAFSLSQETWVNFKVFGLTAATLVNTLLTVVYLFKHLPEDKKKEL HHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHCC K H >Mature Secondary Structure MKQLLDFLPLLVFFAVYKFFDIYAATGALIVATLIQLIATYALYKKIEKMHLITFALVAS CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH FGTATLIFHDDAFIKWKVTIVYALFAIALIAGQFLGKPILKSMLGQEMPVDDKIWARLTW CCCEEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHCCCCCCCCHHHHHHHHH YWVLFFVACGLINIYVAFSLSQETWVNFKVFGLTAATLVNTLLTVVYLFKHLPEDKKKEL HHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHCC K H
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 7.0
TargetDB status: NA
Availability: NA
References: NA