Definition Shewanella amazonensis SB2B chromosome, complete genome.
Accession NC_008700
Length 4,306,142

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The map label for this gene is 119775257

Identifier: 119775257

GI number: 119775257

Start: 2567784

End: 2568695

Strand: Direct

Name: 119775257

Synonym: Sama_2122

Alternate gene names: NA

Gene position: 2567784-2568695 (Clockwise)

Preceding gene: 119775256

Following gene: 119775264

Centisome position: 59.63

GC content: 54.39

Gene sequence:

>912_bases
ATGACAGCTCCCTACCCTATTGGCACGCCCGGTTCGCCCTGGAATGATGCCGACAAGCAAGCCTGGTTTAAAGTCCAAAC
AGTAAAACGCAGCTATCAGGATGAAGTGCTGTCTCGCGTGCTGCCACTGAGTGCCGATTTTGAATTGGTTAACTACGGCG
CACTTTCTATCGATGCCGGACGTTTCCCGCTGTATGCCCTGAAAAACCAATGGCAGCCAGGCCTGCCGCTGGCGCTGGTT
ACGGGCGGTGTTCACGGGTATGAAACCAGCGGCGTACAGGGCGCGCTGGACTTTCTCCATCAGGATGCCAAAGACTATAA
GGGCAAGGTAAACCTTCTGGTTGTACCTTGCGTGAGCCCCTGGGGTTACGAAATCATCAATCGTTGGAACCCCAAAGCGG
TCGATCCCAACCGCTCCTTTGTGGAAAACAGTCCATCAGAGGAATCAGCAGCCCTGCTGAAACTGGTCGCCCCCCATCAG
TCTGACTTTGTGCTGCATATCGACCTGCACGAAACCACAGACACAGATGAAACTGAGTTTCGCCCGGCGCTGGCTGCCCG
TGATGGCAAAGACTATGAGCCCGATGTCATCCCCGATGGCTTTTATCTGGTGGGGGATAGCGATAACCCCCAGGAAGCTT
TCCAAAAAGCGATTATTGATGCGGTGGAAAAGGTCACCCATATTGCGCCCCCCGATGAGAAGGGCAACATTATCGGCTCA
CCTGTGGTGCAGCATGGTGTCATTAACTACCCGGTAAAGAAACTGGGGTTGTGCGCCGGGATAACGGATGCAACCTATAC
CACAACGACCGAGGTCTATCCCGACAGTCCCAAAGCAACAGCTGAAGAATGTAATGCCGCTCAGGTGGCAGCCATTCGCG
CCGCGCTGGACTTTATGCTGGCAAATCGCTGA

Upstream 100 bases:

>100_bases
TGGTCAGGCCTTCAGCGCACAATAAGCTCTATTCACAAGGCCCGCTGCAGCGGGCTTTTTTATATTTACTCTCAGCCAAA
TACAATAAAGAGCAAAGACT

Downstream 100 bases:

>100_bases
TATAGCGGCTCAACGTTTCATAGCAATAAAAACGGCTGCCTTGGCAGCCGTTTTTATTGCGCGAGTCTACTCAAGTCGGA
TAGCGGCAAAGTAAATCGCC

Product: hypothetical protein

Products: NA

Alternate protein names: Zn-Dependent Deacylase/Carboxypeptidase Superfamily; Deacylase; Deacylase/Carboxypeptidase Superfamily Protein; Fusion Protein; Peptidase

Number of amino acids: Translated: 303; Mature: 302

Protein sequence:

>303_residues
MTAPYPIGTPGSPWNDADKQAWFKVQTVKRSYQDEVLSRVLPLSADFELVNYGALSIDAGRFPLYALKNQWQPGLPLALV
TGGVHGYETSGVQGALDFLHQDAKDYKGKVNLLVVPCVSPWGYEIINRWNPKAVDPNRSFVENSPSEESAALLKLVAPHQ
SDFVLHIDLHETTDTDETEFRPALAARDGKDYEPDVIPDGFYLVGDSDNPQEAFQKAIIDAVEKVTHIAPPDEKGNIIGS
PVVQHGVINYPVKKLGLCAGITDATYTTTTEVYPDSPKATAEECNAAQVAAIRAALDFMLANR

Sequences:

>Translated_303_residues
MTAPYPIGTPGSPWNDADKQAWFKVQTVKRSYQDEVLSRVLPLSADFELVNYGALSIDAGRFPLYALKNQWQPGLPLALV
TGGVHGYETSGVQGALDFLHQDAKDYKGKVNLLVVPCVSPWGYEIINRWNPKAVDPNRSFVENSPSEESAALLKLVAPHQ
SDFVLHIDLHETTDTDETEFRPALAARDGKDYEPDVIPDGFYLVGDSDNPQEAFQKAIIDAVEKVTHIAPPDEKGNIIGS
PVVQHGVINYPVKKLGLCAGITDATYTTTTEVYPDSPKATAEECNAAQVAAIRAALDFMLANR
>Mature_302_residues
TAPYPIGTPGSPWNDADKQAWFKVQTVKRSYQDEVLSRVLPLSADFELVNYGALSIDAGRFPLYALKNQWQPGLPLALVT
GGVHGYETSGVQGALDFLHQDAKDYKGKVNLLVVPCVSPWGYEIINRWNPKAVDPNRSFVENSPSEESAALLKLVAPHQS
DFVLHIDLHETTDTDETEFRPALAARDGKDYEPDVIPDGFYLVGDSDNPQEAFQKAIIDAVEKVTHIAPPDEKGNIIGSP
VVQHGVINYPVKKLGLCAGITDATYTTTTEVYPDSPKATAEECNAAQVAAIRAALDFMLANR

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 33107; Mature: 32976

Theoretical pI: Translated: 4.54; Mature: 4.54

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.0 %Cys     (Translated Protein)
0.7 %Met     (Translated Protein)
1.7 %Cys+Met (Translated Protein)
1.0 %Cys     (Mature Protein)
0.3 %Met     (Mature Protein)
1.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTAPYPIGTPGSPWNDADKQAWFKVQTVKRSYQDEVLSRVLPLSADFELVNYGALSIDAG
CCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEECCEEEECCC
RFPLYALKNQWQPGLPLALVTGGVHGYETSGVQGALDFLHQDAKDYKGKVNLLVVPCVSP
CCCHHHHHCCCCCCCCEEEEECCCCCCCCCCHHHHHHHHHHHHHHHCCEEEEEEEECCCC
WGYEIINRWNPKAVDPNRSFVENSPSEESAALLKLVAPHQSDFVLHIDLHETTDTDETEF
CCHHHHHCCCCCCCCCCCHHHCCCCCHHHHHHHHHCCCCCCCEEEEEEECCCCCCCCHHH
RPALAARDGKDYEPDVIPDGFYLVGDSDNPQEAFQKAIIDAVEKVTHIAPPDEKGNIIGS
CHHHHCCCCCCCCCCCCCCCEEEECCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCC
PVVQHGVINYPVKKLGLCAGITDATYTTTTEVYPDSPKATAEECNAAQVAAIRAALDFML
HHHHCCCCCCCHHHHHHHCCCCCCCEEEEEEECCCCCCCHHHHCCHHHHHHHHHHHHHHH
ANR
CCC
>Mature Secondary Structure 
TAPYPIGTPGSPWNDADKQAWFKVQTVKRSYQDEVLSRVLPLSADFELVNYGALSIDAG
CCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEECCEEEECCC
RFPLYALKNQWQPGLPLALVTGGVHGYETSGVQGALDFLHQDAKDYKGKVNLLVVPCVSP
CCCHHHHHCCCCCCCCEEEEECCCCCCCCCCHHHHHHHHHHHHHHHCCEEEEEEEECCCC
WGYEIINRWNPKAVDPNRSFVENSPSEESAALLKLVAPHQSDFVLHIDLHETTDTDETEF
CCHHHHHCCCCCCCCCCCHHHCCCCCHHHHHHHHHCCCCCCCEEEEEEECCCCCCCCHHH
RPALAARDGKDYEPDVIPDGFYLVGDSDNPQEAFQKAIIDAVEKVTHIAPPDEKGNIIGS
CHHHHCCCCCCCCCCCCCCCEEEECCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCC
PVVQHGVINYPVKKLGLCAGITDATYTTTTEVYPDSPKATAEECNAAQVAAIRAALDFML
HHHHCCCCCCCHHHHHHHCCCCCCCEEEEEEECCCCCCCHHHHCCHHHHHHHHHHHHHHH
ANR
CCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA