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The map label for this gene is yafK [C]

Identifier: 119775248

GI number: 119775248

Start: 2555711

End: 2556208

Strand: Direct

Name: yafK [C]

Synonym: Sama_2113

Alternate gene names: 119775248

Gene position: 2555711-2556208 (Clockwise)

Preceding gene: 119775245

Following gene: 119775249

Centisome position: 59.35

GC content: 51.81

Gene sequence:

>498_bases
ATGTTTCGTCAGCTGTTGGTGTTATTGCTGCTGGTCAGTGCCAGTGTGCAGGCAAATGCAATTAAACCGGGTCAGAAAGT
AGACCTGGTGGTGGTTAACAAAGCAGAAGCACAAATGCAGGTGTTTTACCGCGGTGAGCTCATTAAGAGCTATCGCATTG
CAATGGGCGACAACCCCAAGGGACATAAACTCAAAGAAGGCGATCAGCGCACCCCACAGGGCCGTTACCTGCTGGACTTT
AAAAAGGCCGACAGCGCCTATTACCGCTCTATTCACATCTCTTATCCCAACGACGAAGACATTCTGCGCGCCAAAGCCCT
CGGTATAAGCCCCGGTGGCGCCATTATGATCCATGGTCAGGACCCCAAATCGCCCCTGAGTGCAGAAGAAGCGCAAAAGT
ATAACTGGACCAACGGCTGTATCGCCGTCACCAACAGAGACATGGATGAGCTGTGGCAATTGATAGACCCAGGCACTCCT
ATCGAAATCTGGCCCTGA

Upstream 100 bases:

>100_bases
CTCAAAAACAATTCTCAATGCAGTTTTCAGCTGCCGCAGCCTTGGGTAGAATTCGATTCAGCACGTCTTGTGCATAGAAT
AATGGTGGATTGGGGATTTC

Downstream 100 bases:

>100_bases
GGTAAGGATGCAACTGGAATCGTTGTTAAACAGCTGGTCCGAATTTGAGACCCGTATACTCGCCCTGGTTGATAAGCTGG
GTTTAACCGACCTTAAGCTT

Product: ErfK/YbiS/YcfS/YnhG

Products: NA

Alternate protein names: ErfK/YbiS/YcfS/YnhG; Lipoprotein; ErfK/YbiS/YcfS/YnhG-Related Protein; ErfK/YbiS/YcfS/YnhG Protein; Peptidoglycan L D-Transpeptidase Lipoprotein; Protein ERFK

Number of amino acids: Translated: 165; Mature: 165

Protein sequence:

>165_residues
MFRQLLVLLLLVSASVQANAIKPGQKVDLVVVNKAEAQMQVFYRGELIKSYRIAMGDNPKGHKLKEGDQRTPQGRYLLDF
KKADSAYYRSIHISYPNDEDILRAKALGISPGGAIMIHGQDPKSPLSAEEAQKYNWTNGCIAVTNRDMDELWQLIDPGTP
IEIWP

Sequences:

>Translated_165_residues
MFRQLLVLLLLVSASVQANAIKPGQKVDLVVVNKAEAQMQVFYRGELIKSYRIAMGDNPKGHKLKEGDQRTPQGRYLLDF
KKADSAYYRSIHISYPNDEDILRAKALGISPGGAIMIHGQDPKSPLSAEEAQKYNWTNGCIAVTNRDMDELWQLIDPGTP
IEIWP
>Mature_165_residues
MFRQLLVLLLLVSASVQANAIKPGQKVDLVVVNKAEAQMQVFYRGELIKSYRIAMGDNPKGHKLKEGDQRTPQGRYLLDF
KKADSAYYRSIHISYPNDEDILRAKALGISPGGAIMIHGQDPKSPLSAEEAQKYNWTNGCIAVTNRDMDELWQLIDPGTP
IEIWP

Specific function: Unknown

COG id: COG3034

COG function: function code S; Uncharacterized protein conserved in bacteria

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 18511; Mature: 18511

Theoretical pI: Translated: 8.41; Mature: 8.41

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.6 %Cys     (Translated Protein)
3.0 %Met     (Translated Protein)
3.6 %Cys+Met (Translated Protein)
0.6 %Cys     (Mature Protein)
3.0 %Met     (Mature Protein)
3.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MFRQLLVLLLLVSASVQANAIKPGQKVDLVVVNKAEAQMQVFYRGELIKSYRIAMGDNPK
CHHHHHHHHHHHHCCCCCCCCCCCCEEEEEEEECCCCEEEEEEHHHHHEEEEEEECCCCC
GHKLKEGDQRTPQGRYLLDFKKADSAYYRSIHISYPNDEDILRAKALGISPGGAIMIHGQ
CCCCCCCCCCCCCCCEEEEEECCCCEEEEEEEEECCCCHHHHHHHHCCCCCCCEEEEECC
DPKSPLSAEEAQKYNWTNGCIAVTNRDMDELWQLIDPGTPIEIWP
CCCCCCCCHHHHHCCCCCCEEEEECCCHHHHHHHHCCCCCEEECC
>Mature Secondary Structure
MFRQLLVLLLLVSASVQANAIKPGQKVDLVVVNKAEAQMQVFYRGELIKSYRIAMGDNPK
CHHHHHHHHHHHHCCCCCCCCCCCCEEEEEEEECCCCEEEEEEHHHHHEEEEEEECCCCC
GHKLKEGDQRTPQGRYLLDFKKADSAYYRSIHISYPNDEDILRAKALGISPGGAIMIHGQ
CCCCCCCCCCCCCCCEEEEEECCCCEEEEEEEEECCCCHHHHHHHHCCCCCCCEEEEECC
DPKSPLSAEEAQKYNWTNGCIAVTNRDMDELWQLIDPGTPIEIWP
CCCCCCCCHHHHHCCCCCCEEEEECCCHHHHHHHHCCCCCEEECC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA