Definition Shewanella amazonensis SB2B chromosome, complete genome.
Accession NC_008700
Length 4,306,142

Click here to switch to the map view.

The map label for this gene is 119775239

Identifier: 119775239

GI number: 119775239

Start: 2548556

End: 2548903

Strand: Reverse

Name: 119775239

Synonym: Sama_2104

Alternate gene names: NA

Gene position: 2548903-2548556 (Counterclockwise)

Preceding gene: 119775240

Following gene: 119775238

Centisome position: 59.19

GC content: 47.99

Gene sequence:

>348_bases
ATGAACCGCATAAATACCATTAACTATTTGGAAATTCCCTGCAGTAAGTTGGCTGAAACCAAGGCATTTTTCAGTGCAGT
ATTTGGCTGGGACTTTCTTGATTACGGTCCTGAATACAGCTGCTTTTTGGATGCAGGTATCGACGGTGGCTTTTATCTGG
CCGACATAAGCTTCAGTGCTGCGGCAGGACCACTGTTGGTTCTTTACAGTGATGATTTAGCGGCGAAACAGGAGCAAATC
ATGCACCAGGGTGGCCGTATAGTCCGGTCCGTCTTCAGCTTTCCCGGTGGTCGACGTTTTCACTTTGCCTGTCCCAGTGG
CAATGAATATGCCGTCTGGTCTGAATAG

Upstream 100 bases:

>100_bases
CTTATCGGTCTTGTCGCCGGGCTGCTACAGGCATAAACTGGCTGTGGTACGGTAAAAGTCTGCGTAAGGTGTAAATGCCC
ATCGGCGTCAAGGAAGCATG

Downstream 100 bases:

>100_bases
GAGTTCAAGTGCCTCATTGTATTATTGATTTTTCAGCCAATGTTGGCGGACATGATATCGCACAGACGCTGACGCGCGCA
TGCCACAGCGCCATGGTTGC

Product: glyoxalase/bleomycin resistance protein/dioxygenase

Products: NA

Alternate protein names: Glyoxalase Family Protein; Glyoxalase/Dioxygenase Superfamily Protein; Glyoxalase/Bleomycin Resistance Protein; Glyoxalase; Lactoylglutathione Lyase; Glyoxalase Protein; Glyoxalase I

Number of amino acids: Translated: 115; Mature: 115

Protein sequence:

>115_residues
MNRINTINYLEIPCSKLAETKAFFSAVFGWDFLDYGPEYSCFLDAGIDGGFYLADISFSAAAGPLLVLYSDDLAAKQEQI
MHQGGRIVRSVFSFPGGRRFHFACPSGNEYAVWSE

Sequences:

>Translated_115_residues
MNRINTINYLEIPCSKLAETKAFFSAVFGWDFLDYGPEYSCFLDAGIDGGFYLADISFSAAAGPLLVLYSDDLAAKQEQI
MHQGGRIVRSVFSFPGGRRFHFACPSGNEYAVWSE
>Mature_115_residues
MNRINTINYLEIPCSKLAETKAFFSAVFGWDFLDYGPEYSCFLDAGIDGGFYLADISFSAAAGPLLVLYSDDLAAKQEQI
MHQGGRIVRSVFSFPGGRRFHFACPSGNEYAVWSE

Specific function: Unknown

COG id: COG3324

COG function: function code R; Predicted enzyme related to lactoylglutathione lyase

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 12766; Mature: 12766

Theoretical pI: Translated: 4.54; Mature: 4.54

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.6 %Cys     (Translated Protein)
1.7 %Met     (Translated Protein)
4.3 %Cys+Met (Translated Protein)
2.6 %Cys     (Mature Protein)
1.7 %Met     (Mature Protein)
4.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNRINTINYLEIPCSKLAETKAFFSAVFGWDFLDYGPEYSCFLDAGIDGGFYLADISFSA
CCCCCCCEEEECCHHHHHHHHHHHHHHHCCHHHHCCCCEEEEEECCCCCCEEEEEECCCC
AAGPLLVLYSDDLAAKQEQIMHQGGRIVRSVFSFPGGRRFHFACPSGNEYAVWSE
CCCCEEEEECCCCHHHHHHHHHHCCHHHHHHHCCCCCCEEEEECCCCCEEEEECC
>Mature Secondary Structure
MNRINTINYLEIPCSKLAETKAFFSAVFGWDFLDYGPEYSCFLDAGIDGGFYLADISFSA
CCCCCCCEEEECCHHHHHHHHHHHHHHHCCHHHHCCCCEEEEEECCCCCCEEEEEECCCC
AAGPLLVLYSDDLAAKQEQIMHQGGRIVRSVFSFPGGRRFHFACPSGNEYAVWSE
CCCCEEEEECCCCHHHHHHHHHHCCHHHHHHHCCCCCCEEEEECCCCCEEEEECC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA