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The map label for this gene is clpS

Identifier: 119775192

GI number: 119775192

Start: 2493102

End: 2493410

Strand: Reverse

Name: clpS

Synonym: Sama_2057

Alternate gene names: 119775192

Gene position: 2493410-2493102 (Counterclockwise)

Preceding gene: 119775194

Following gene: 119775191

Centisome position: 57.9

GC content: 43.37

Gene sequence:

>309_bases
ATGGCAAAAGCAGGAAATATAGAAAGAGTAGTCGAGCGTGCCGACACTGAACTGATGCCGCCGTCCATGTATAAGGTGAT
CCTGAATAATGACGATTACACCCCCATGGATTTTGTGGTAGAAGTACTTCAGTTGTTCTTCAAGATGAATGAGCATCAGG
CAACAGAAATCATGTTGCAAATCCATCATCAGGGTAAGGCAGTATGTGGTGTGTTTCCTTTCGGCATTGCCGAAACCAAG
GTTGCTCAGGTAAATCAATTTGCCAGACAAAACCAACATCCATTACTGTGTTCTTTGGAGAAAGCCTAA

Upstream 100 bases:

>100_bases
GTCAAGCTAAAATTAACAAAGAGGCAACATCTGCTTAATTAAGTGGTATCAATTGGTCAGGCCAGTTGGTGCACTGTATT
TGAGAGGCTAATATTGCTAT

Downstream 100 bases:

>100_bases
AGCATCAAGTCTTTCCGTGCGCTTTAGCAGCAGTTTTAGGGGGTATTTATGCTGAACAAAGATCTTGAAGTGACGTTGAA
TCTGGCGTTTCAGCAGGCAA

Product: ATP-dependent Clp protease adaptor protein ClpS

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 102; Mature: 101

Protein sequence:

>102_residues
MAKAGNIERVVERADTELMPPSMYKVILNNDDYTPMDFVVEVLQLFFKMNEHQATEIMLQIHHQGKAVCGVFPFGIAETK
VAQVNQFARQNQHPLLCSLEKA

Sequences:

>Translated_102_residues
MAKAGNIERVVERADTELMPPSMYKVILNNDDYTPMDFVVEVLQLFFKMNEHQATEIMLQIHHQGKAVCGVFPFGIAETK
VAQVNQFARQNQHPLLCSLEKA
>Mature_101_residues
AKAGNIERVVERADTELMPPSMYKVILNNDDYTPMDFVVEVLQLFFKMNEHQATEIMLQIHHQGKAVCGVFPFGIAETKV
AQVNQFARQNQHPLLCSLEKA

Specific function: Involved in the modulation of the specificity of the ClpAP-mediated ATP-dependent protein degradation

COG id: COG2127

COG function: function code S; Uncharacterized conserved protein

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the ClpS family

Homologues:

Organism=Escherichia coli, GI1787108, Length=91, Percent_Identity=63.7362637362637, Blast_Score=131, Evalue=7e-33,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): CLPS_SHEAM (A1S7A6)

Other databases:

- EMBL:   CP000507
- RefSeq:   YP_927932.1
- ProteinModelPortal:   A1S7A6
- SMR:   A1S7A6
- STRING:   A1S7A6
- GeneID:   4604307
- GenomeReviews:   CP000507_GR
- KEGG:   saz:Sama_2057
- NMPDR:   fig|326297.7.peg.1932
- eggNOG:   COG2127
- HOGENOM:   HBG644923
- OMA:   VFPFGIA
- PhylomeDB:   A1S7A6
- ProtClustDB:   CLSK906806
- HAMAP:   MF_00302
- InterPro:   IPR022935
- InterPro:   IPR003769
- InterPro:   IPR014719
- Gene3D:   G3DSA:3.30.1390.10

Pfam domain/function: PF02617 ClpS; SSF54736 Ribosomal_L7/12_C/ClpS-like

EC number: NA

Molecular weight: Translated: 11605; Mature: 11473

Theoretical pI: Translated: 6.08; Mature: 6.08

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.0 %Cys     (Translated Protein)
5.9 %Met     (Translated Protein)
7.8 %Cys+Met (Translated Protein)
2.0 %Cys     (Mature Protein)
5.0 %Met     (Mature Protein)
6.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MAKAGNIERVVERADTELMPPSMYKVILNNDDYTPMDFVVEVLQLFFKMNEHQATEIMLQ
CCCCCCHHHHHHHHCCCCCCCCCEEEEECCCCCCHHHHHHHHHHHHHHCCCCHHHHHHHH
IHHQGKAVCGVFPFGIAETKVAQVNQFARQNQHPLLCSLEKA
HHCCCCEEEEECCCCCCHHHHHHHHHHHHCCCCCEEEEECCC
>Mature Secondary Structure 
AKAGNIERVVERADTELMPPSMYKVILNNDDYTPMDFVVEVLQLFFKMNEHQATEIMLQ
CCCCCHHHHHHHHCCCCCCCCCEEEEECCCCCCHHHHHHHHHHHHHHCCCCHHHHHHHH
IHHQGKAVCGVFPFGIAETKVAQVNQFARQNQHPLLCSLEKA
HHCCCCEEEEECCCCCCHHHHHHHHHHHHCCCCCEEEEECCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA