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The map label for this gene is ybgI [C]

Identifier: 119775185

GI number: 119775185

Start: 2487031

End: 2487780

Strand: Reverse

Name: ybgI [C]

Synonym: Sama_2050

Alternate gene names: 119775185

Gene position: 2487780-2487031 (Counterclockwise)

Preceding gene: 119775187

Following gene: 119775183

Centisome position: 57.77

GC content: 53.07

Gene sequence:

>750_bases
ATGGAGCGCAGCGTTTTGGGCCAGTATCTGGCCGACTTTTTACAAACCGGAAAATTTAAGGACTACGCCCCCAATGGACT
GCAGATAGAGGGCAAGGCGGAGATCCAAATCATAGTCACCGGAGTGACGGCCTGTCAGGCATTGATTGAGCGTGCCATAG
AACTCAAGGCCGATGCCATATTGGTTCATCATGGCTTTTTCTGGAAAAACGAGCCGGATGTATTGGTGGGGATGAAACAG
CGCCGTATCAAGTCATTGCTGGCACATGATATTAACCTCTTTGGGTATCACTTGCCGCTGGATGCGCACCCCGTGGTTGG
GAATAACGCTACCCTTGGCCGCCGCATGGGCATTTTGGATGCAGAGGCGTTTGAAGCCGTTGGCGATGGCTTACTGTGGG
GTGGGAGCCTTGATACGGCGTTGAGTGGTGAGGCGTTTGCCGGATTGCTGGCCAAAGTACTGGGACGCGAACCTTTGCAC
ATTGACGCCGATAAGCCAGTACAACGCCTGGCCTGGTGCACCGGCGGTGCCCAGGATTATATCGACCTCGCCGTGAGTTT
GGGTGTTGATGCCTTTATCAGTGGTGAAGTATCAGAGCGCACCTTCCACAGCGCCAAAGAGCAGGGCATTCATTATTTTG
CTGCGGGTCATCACGCCACTGAGCGCTATGGTATAGAGGCGTTAGGTGAGCATCTTCGCCGCGAATTTGGCCTGACACAT
CATTTTGTCGATATCGATAATCCGGTTTAA

Upstream 100 bases:

>100_bases
CGGCAAAGACCGGCAGGCACGGCATCGGTTGACCCCAAATTCAGGATCAGTACACTTTGACAGTAACCTCTTGAGAGTTA
AGTACAGTGTTGGAGGCGCC

Downstream 100 bases:

>100_bases
GGCGTTACAATCACGCGCTTGAATATACAAAAAAGGCCGCAATTGCGGCCTTTTCATTTCAACGTTGAGCTTACTTCACC
CGCATACCTGGTTTGGCGCC

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 249; Mature: 249

Protein sequence:

>249_residues
MERSVLGQYLADFLQTGKFKDYAPNGLQIEGKAEIQIIVTGVTACQALIERAIELKADAILVHHGFFWKNEPDVLVGMKQ
RRIKSLLAHDINLFGYHLPLDAHPVVGNNATLGRRMGILDAEAFEAVGDGLLWGGSLDTALSGEAFAGLLAKVLGREPLH
IDADKPVQRLAWCTGGAQDYIDLAVSLGVDAFISGEVSERTFHSAKEQGIHYFAAGHHATERYGIEALGEHLRREFGLTH
HFVDIDNPV

Sequences:

>Translated_249_residues
MERSVLGQYLADFLQTGKFKDYAPNGLQIEGKAEIQIIVTGVTACQALIERAIELKADAILVHHGFFWKNEPDVLVGMKQ
RRIKSLLAHDINLFGYHLPLDAHPVVGNNATLGRRMGILDAEAFEAVGDGLLWGGSLDTALSGEAFAGLLAKVLGREPLH
IDADKPVQRLAWCTGGAQDYIDLAVSLGVDAFISGEVSERTFHSAKEQGIHYFAAGHHATERYGIEALGEHLRREFGLTH
HFVDIDNPV
>Mature_249_residues
MERSVLGQYLADFLQTGKFKDYAPNGLQIEGKAEIQIIVTGVTACQALIERAIELKADAILVHHGFFWKNEPDVLVGMKQ
RRIKSLLAHDINLFGYHLPLDAHPVVGNNATLGRRMGILDAEAFEAVGDGLLWGGSLDTALSGEAFAGLLAKVLGREPLH
IDADKPVQRLAWCTGGAQDYIDLAVSLGVDAFISGEVSERTFHSAKEQGIHYFAAGHHATERYGIEALGEHLRREFGLTH
HFVDIDNPV

Specific function: Unknown

COG id: COG0327

COG function: function code S; Uncharacterized conserved protein

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the UPF0135 (NIF3) family [H]

Homologues:

Organism=Escherichia coli, GI1786928, Length=250, Percent_Identity=53.2, Blast_Score=260, Evalue=5e-71,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR002678 [H]

Pfam domain/function: PF01784 NIF3 [H]

EC number: NA

Molecular weight: Translated: 27230; Mature: 27230

Theoretical pI: Translated: 5.87; Mature: 5.87

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.8 %Cys     (Translated Protein)
1.2 %Met     (Translated Protein)
2.0 %Cys+Met (Translated Protein)
0.8 %Cys     (Mature Protein)
1.2 %Met     (Mature Protein)
2.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MERSVLGQYLADFLQTGKFKDYAPNGLQIEGKAEIQIIVTGVTACQALIERAIELKADAI
CCHHHHHHHHHHHHHCCCCCCCCCCCEEEECCCEEEEEEECHHHHHHHHHHHHHHHHCEE
LVHHGFFWKNEPDVLVGMKQRRIKSLLAHDINLFGYHLPLDAHPVVGNNATLGRRMGILD
EEECCEEECCCCCCEECCHHHHHHHHHHHHHHHEEEECCCCCCCCCCCCCCCHHHCCCCC
AEAFEAVGDGLLWGGSLDTALSGEAFAGLLAKVLGREPLHIDADKPVQRLAWCTGGAQDY
HHHHHHHCCCEEECCCCCCCCCCHHHHHHHHHHHCCCCCEECCCCHHHHHHHHCCCHHHH
IDLAVSLGVDAFISGEVSERTFHSAKEQGIHYFAAGHHATERYGIEALGEHLRREFGLTH
HHHHHHHCCHHEECCCCHHHHHHHHHHCCCEEEECCCCCHHHHCHHHHHHHHHHHHCCCE
HFVDIDNPV
EEEECCCCC
>Mature Secondary Structure
MERSVLGQYLADFLQTGKFKDYAPNGLQIEGKAEIQIIVTGVTACQALIERAIELKADAI
CCHHHHHHHHHHHHHCCCCCCCCCCCEEEECCCEEEEEEECHHHHHHHHHHHHHHHHCEE
LVHHGFFWKNEPDVLVGMKQRRIKSLLAHDINLFGYHLPLDAHPVVGNNATLGRRMGILD
EEECCEEECCCCCCEECCHHHHHHHHHHHHHHHEEEECCCCCCCCCCCCCCCHHHCCCCC
AEAFEAVGDGLLWGGSLDTALSGEAFAGLLAKVLGREPLHIDADKPVQRLAWCTGGAQDY
HHHHHHHCCCEEECCCCCCCCCCHHHHHHHHHHHCCCCCEECCCCHHHHHHHHCCCHHHH
IDLAVSLGVDAFISGEVSERTFHSAKEQGIHYFAAGHHATERYGIEALGEHLRREFGLTH
HHHHHHHCCHHEECCCCHHHHHHHHHHCCCEEEECCCCCHHHHCHHHHHHHHHHHHCCCE
HFVDIDNPV
EEEECCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 10952301 [H]