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The map label for this gene is vdlD [H]

Identifier: 119775112

GI number: 119775112

Start: 2406187

End: 2406666

Strand: Reverse

Name: vdlD [H]

Synonym: Sama_1977

Alternate gene names: 119775112

Gene position: 2406666-2406187 (Counterclockwise)

Preceding gene: 119775113

Following gene: 119775111

Centisome position: 55.89

GC content: 58.13

Gene sequence:

>480_bases
ATGGCCGGACAAGACAGGCACCTGACCTTACGTTTTCTCGCAGAGCCCGCCGATGTGAATTTCGGTGGCAAGGTTCACGG
CGGCGCCGTGATGAAGTGGATTGACCTTGCTGCCTACGCCTGTGCCGCAGGGTGGAGCGGCAAGTATTGTATTACCGCCT
ATGCCGGTGGCATTCGCTTCGTCAAACCCATCCACGTGGGCAATATCGTCGAAGTCAGCGCCAAGGTGATTTATACCGGC
AACAGTTCGATGCATATCGGCATTGATGTTCGGGCAGGGGACCCCAAGGTGTCTGAGCGTCAGCTGACGACTCACTGTAT
TGTGATCATGGTGGCGGTGGACGATGCCGGCAACCCCACGCCTGTGCCTGAGTGGGTGCCGCAAACCGAGGAAGACAAGG
CGCTGCGCGACTCTGCTATCCGGCTGATGGAAATGCGCAAAAAAATCGGCAGCGAAATGGCCGCCCACGTCACACCCTGA

Upstream 100 bases:

>100_bases
CGGGACGTTTCGTTCTGGCGCCTTTTCTTTTTGTCGGTGCATTCACGTGCTTATGCTTTTGGCGTAAGCTTAATTTACTT
TAACAAGATAGGGTTACAAC

Downstream 100 bases:

>100_bases
ACTTTGTCTGTCTTTAGCCTGAGTGCGGGAGTTCGCGCTCAGGTTTAATTACAAAAATATCCATAAGCCCGCAAAAGGGC
ACTGCGTCTATGTCTGAAAC

Product: cytosolic long-chain acyl-CoA thioester hydrolase family protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 159; Mature: 158

Protein sequence:

>159_residues
MAGQDRHLTLRFLAEPADVNFGGKVHGGAVMKWIDLAAYACAAGWSGKYCITAYAGGIRFVKPIHVGNIVEVSAKVIYTG
NSSMHIGIDVRAGDPKVSERQLTTHCIVIMVAVDDAGNPTPVPEWVPQTEEDKALRDSAIRLMEMRKKIGSEMAAHVTP

Sequences:

>Translated_159_residues
MAGQDRHLTLRFLAEPADVNFGGKVHGGAVMKWIDLAAYACAAGWSGKYCITAYAGGIRFVKPIHVGNIVEVSAKVIYTG
NSSMHIGIDVRAGDPKVSERQLTTHCIVIMVAVDDAGNPTPVPEWVPQTEEDKALRDSAIRLMEMRKKIGSEMAAHVTP
>Mature_158_residues
AGQDRHLTLRFLAEPADVNFGGKVHGGAVMKWIDLAAYACAAGWSGKYCITAYAGGIRFVKPIHVGNIVEVSAKVIYTGN
SSMHIGIDVRAGDPKVSERQLTTHCIVIMVAVDDAGNPTPVPEWVPQTEEDKALRDSAIRLMEMRKKIGSEMAAHVTP

Specific function: Unknown

COG id: COG1607

COG function: function code I; Acyl-CoA hydrolase

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the acyl coenzyme A hydrolase family [H]

Homologues:

Organism=Homo sapiens, GI32528286, Length=144, Percent_Identity=32.6388888888889, Blast_Score=70, Evalue=8e-13,
Organism=Homo sapiens, GI32528284, Length=144, Percent_Identity=32.6388888888889, Blast_Score=70, Evalue=8e-13,
Organism=Homo sapiens, GI75709208, Length=144, Percent_Identity=32.6388888888889, Blast_Score=70, Evalue=9e-13,
Organism=Homo sapiens, GI32528282, Length=144, Percent_Identity=32.6388888888889, Blast_Score=70, Evalue=9e-13,
Organism=Escherichia coli, GI1787506, Length=119, Percent_Identity=31.0924369747899, Blast_Score=64, Evalue=6e-12,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR006683 [H]

Pfam domain/function: PF03061 4HBT [H]

EC number: 3.1.2.- [C]

Molecular weight: Translated: 17172; Mature: 17041

Theoretical pI: Translated: 7.60; Mature: 7.60

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.9 %Cys     (Translated Protein)
4.4 %Met     (Translated Protein)
6.3 %Cys+Met (Translated Protein)
1.9 %Cys     (Mature Protein)
3.8 %Met     (Mature Protein)
5.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MAGQDRHLTLRFLAEPADVNFGGKVHGGAVMKWIDLAAYACAAGWSGKYCITAYAGGIRF
CCCCCCEEEEEEEECCCCCCCCCEECCCHHHHHHHHHHHHHHCCCCCCEEEEEEECCEEE
VKPIHVGNIVEVSAKVIYTGNSSMHIGIDVRAGDPKVSERQLTTHCIVIMVAVDDAGNPT
EEEECCCCEEEEEEEEEEECCCCEEEEEEEECCCCCCCHHEEEEEEEEEEEEECCCCCCC
PVPEWVPQTEEDKALRDSAIRLMEMRKKIGSEMAAHVTP
CCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCHHHHCCCC
>Mature Secondary Structure 
AGQDRHLTLRFLAEPADVNFGGKVHGGAVMKWIDLAAYACAAGWSGKYCITAYAGGIRF
CCCCCEEEEEEEECCCCCCCCCEECCCHHHHHHHHHHHHHHCCCCCCEEEEEEECCEEE
VKPIHVGNIVEVSAKVIYTGNSSMHIGIDVRAGDPKVSERQLTTHCIVIMVAVDDAGNPT
EEEECCCCEEEEEEEEEEECCCCEEEEEEEECCCCCCCHHEEEEEEEEEEEEECCCCCCC
PVPEWVPQTEEDKALRDSAIRLMEMRKKIGSEMAAHVTP
CCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: Hydrolase; Acting on ester bonds; Thiolester hydrolases [C]

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9923682 [H]