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The map label for this gene is yoaA [H]

Identifier: 119775075

GI number: 119775075

Start: 2366483

End: 2368480

Strand: Reverse

Name: yoaA [H]

Synonym: Sama_1940

Alternate gene names: 119775075

Gene position: 2368480-2366483 (Counterclockwise)

Preceding gene: 119775084

Following gene: 119775074

Centisome position: 55.0

GC content: 55.91

Gene sequence:

>1998_bases
TTGTCTTCCCAATCCGCTGCCAACAACCTGATAACCCGCACACAGGCCGTCTTCGATGAAGGTGGGCTGCTGTCGCGTTT
TATCCGCGGTTACCGGCGTCGTGAGGTGCAGCAGCAGATGGCTGAGGAAGTGGCGTCCTGCTTGAGTCATACCCATAAGC
TGGTGCTCGAGGCGGGCACCGGTGTGGGAAAAACCTTTGCTTATCTGGTGCCCGCGCTTTTAAGTGGCAAGCAGGTCATT
GTCAGTACCGGCAGTAAAAATCTGCAGGAGCAGCTCTTTTATAAAGACTTACCAGCCCTGTTGGAGATGCTTAAGCTCCA
CCTGCCAGTGAGCATTTTAAAGGGCCGCAGCAATTATTTGTGCCAGCGGCTGATGGCAGCACAAATGGAAGCGGCTTTCA
GTCACGATGAGAAGCTTTTGGATGATTTGCTCAAACTCAATCAGTTTGCGCAAACCACTGAAGATGGCGACCTTGGCAAT
CTGACCGGAGTGGCCGAAGATGCCCGTGCCATCAGTTTGGTAGCCAGCACACAGGATAGCTGCACCGGCCAGCGCTGCGC
CTTCTATGAAGATTGCTTTACCCGGAAAGCCCGCGCCCGCGCGATGAATGCTCGCTTGATTGTGGTGAACCATCATCTGT
TTTTTGCAGACAGGGTATTGAAAGACACAGGCTTTGCCGAACTCTTACCCGATGTGGATGCGGTGATTTTCGATGAGGCG
CACCTGCTACCTGATATCGCTATGCAGTATTTTGGCGCTCAGCTTTCTACCGGCAGCCTGCGGCGGCTGCTGGACGGGAT
AGAGCGGCTTACCGAAGGCGAGCTTGGCGATACCCAGGGACTTAAGCTGTTGCCACAACGTGCCCGGATTAAGTTGGATG
CCTGGCAAAATTGCTTGTTGGATGCTGGCAGCAGTGATTTTCGGCAACTGCTGAAAGATAAGACGGCGGCGCTGGCGGCA
GGCGAGCTGATTGCCGAGTTATCGGCACTGGAAGCCTTGCTGCTTGCCAATGTGGGCCGCAGTGAGCCACTTGATGACTT
TGCCGTTAAGCTGCCGGAGCTTAAGCAAAAGCTTGAGCGCTTCATTGCCTGTGACGATCCGGGCTCTGCCTACAGCATAG
ATATCGGTGAGCGTCATCTGATGCTGCGTATTTCACCCATCGACATCGCGAAGGCGTGCAGCGAGTTGTTCAGCGAAGAC
ACCGCCTGGGTGTTTACCTCTGCGACCTTGCAGGTGGAACGAAGCCTGCAATTTTTTACCCGAGAGCTTGGGCTGACTTC
TGCGAAGCCTGTATCAGCTAAACGCAGCCAATCCGGGGCAGGTGCCAAATCCGCAGTGTGTAAAGAAGTGCTGCTCGACA
GTCCCTTTGATTACCCCAGGCAATCGCTTTTGTGCGTGCCGCGCCGTTTAGGCAGTGTGGCCAATCAGGACGCTATGGTG
TGCCAGCTCACCGAGGTATGCCTCAAGCTGATCAGGGCCGCCAAGGGCCGCACCTTTATCCTCTTTACCAGTCACAGGAT
GATGGAGGCCGTGGCGCGCTCGTTGGTGGGCCGCTGCCATTACCCTTTGCTTGTGCAGGGGCAGGGCGGTAAGCAGCAAT
TGCTGTCCAAATTCAGACAGTTGGGAGAGGCCGTGCTGCTTGGCACTGGCAGCTTTTGGGAAGGGGTTGACGTGCGTGGT
AAGCTGCTGTCGTGCGTCATTATCGATAAGCTCCCCTTTGCTTCGCCGGATGACAGTCTCTACAAAGCCCGCGCCAGTCG
GGTTGAGGCCAGAGGTGGCGATCCCTTTCTGGAAATTTCGCTGCCCCAGGCGGTGATTGCGCTGAAACAGGGGGCTGGCA
GGCTTATCCGCGATGAAACCGACCGTGGGGTACTGGTGATCTGCGATAACCGCCTGGTCAACCGGCCCTATGGTCAGGCA
TTTTTGCAATCGCTGCCGCCCATGGCCCGCACCCGTGATTTGGATGAGGCCTGCGCTTTTTTAGCCGCTATTGACTGA

Upstream 100 bases:

>100_bases
GCTGTCTTTGGTGTGTGTTGAACACTTTTCTTGTGGCAGTCAGTGAAATCGGCATAATGCATTCAACCAAAAGGTGAATC
ACTTCAATGCTGGAGCCTGC

Downstream 100 bases:

>100_bases
ATTTAGTCCGACTGCTGGCGTTAGCCGTTTTATGGGCCGTGTTTTATCGGGTAAAATCATTGCTATTAACGATAGGGCCA
CCTTTCTGTGGCCAAACGAT

Product: ATP-dependent helicase DinG

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 665; Mature: 664

Protein sequence:

>665_residues
MSSQSAANNLITRTQAVFDEGGLLSRFIRGYRRREVQQQMAEEVASCLSHTHKLVLEAGTGVGKTFAYLVPALLSGKQVI
VSTGSKNLQEQLFYKDLPALLEMLKLHLPVSILKGRSNYLCQRLMAAQMEAAFSHDEKLLDDLLKLNQFAQTTEDGDLGN
LTGVAEDARAISLVASTQDSCTGQRCAFYEDCFTRKARARAMNARLIVVNHHLFFADRVLKDTGFAELLPDVDAVIFDEA
HLLPDIAMQYFGAQLSTGSLRRLLDGIERLTEGELGDTQGLKLLPQRARIKLDAWQNCLLDAGSSDFRQLLKDKTAALAA
GELIAELSALEALLLANVGRSEPLDDFAVKLPELKQKLERFIACDDPGSAYSIDIGERHLMLRISPIDIAKACSELFSED
TAWVFTSATLQVERSLQFFTRELGLTSAKPVSAKRSQSGAGAKSAVCKEVLLDSPFDYPRQSLLCVPRRLGSVANQDAMV
CQLTEVCLKLIRAAKGRTFILFTSHRMMEAVARSLVGRCHYPLLVQGQGGKQQLLSKFRQLGEAVLLGTGSFWEGVDVRG
KLLSCVIIDKLPFASPDDSLYKARASRVEARGGDPFLEISLPQAVIALKQGAGRLIRDETDRGVLVICDNRLVNRPYGQA
FLQSLPPMARTRDLDEACAFLAAID

Sequences:

>Translated_665_residues
MSSQSAANNLITRTQAVFDEGGLLSRFIRGYRRREVQQQMAEEVASCLSHTHKLVLEAGTGVGKTFAYLVPALLSGKQVI
VSTGSKNLQEQLFYKDLPALLEMLKLHLPVSILKGRSNYLCQRLMAAQMEAAFSHDEKLLDDLLKLNQFAQTTEDGDLGN
LTGVAEDARAISLVASTQDSCTGQRCAFYEDCFTRKARARAMNARLIVVNHHLFFADRVLKDTGFAELLPDVDAVIFDEA
HLLPDIAMQYFGAQLSTGSLRRLLDGIERLTEGELGDTQGLKLLPQRARIKLDAWQNCLLDAGSSDFRQLLKDKTAALAA
GELIAELSALEALLLANVGRSEPLDDFAVKLPELKQKLERFIACDDPGSAYSIDIGERHLMLRISPIDIAKACSELFSED
TAWVFTSATLQVERSLQFFTRELGLTSAKPVSAKRSQSGAGAKSAVCKEVLLDSPFDYPRQSLLCVPRRLGSVANQDAMV
CQLTEVCLKLIRAAKGRTFILFTSHRMMEAVARSLVGRCHYPLLVQGQGGKQQLLSKFRQLGEAVLLGTGSFWEGVDVRG
KLLSCVIIDKLPFASPDDSLYKARASRVEARGGDPFLEISLPQAVIALKQGAGRLIRDETDRGVLVICDNRLVNRPYGQA
FLQSLPPMARTRDLDEACAFLAAID
>Mature_664_residues
SSQSAANNLITRTQAVFDEGGLLSRFIRGYRRREVQQQMAEEVASCLSHTHKLVLEAGTGVGKTFAYLVPALLSGKQVIV
STGSKNLQEQLFYKDLPALLEMLKLHLPVSILKGRSNYLCQRLMAAQMEAAFSHDEKLLDDLLKLNQFAQTTEDGDLGNL
TGVAEDARAISLVASTQDSCTGQRCAFYEDCFTRKARARAMNARLIVVNHHLFFADRVLKDTGFAELLPDVDAVIFDEAH
LLPDIAMQYFGAQLSTGSLRRLLDGIERLTEGELGDTQGLKLLPQRARIKLDAWQNCLLDAGSSDFRQLLKDKTAALAAG
ELIAELSALEALLLANVGRSEPLDDFAVKLPELKQKLERFIACDDPGSAYSIDIGERHLMLRISPIDIAKACSELFSEDT
AWVFTSATLQVERSLQFFTRELGLTSAKPVSAKRSQSGAGAKSAVCKEVLLDSPFDYPRQSLLCVPRRLGSVANQDAMVC
QLTEVCLKLIRAAKGRTFILFTSHRMMEAVARSLVGRCHYPLLVQGQGGKQQLLSKFRQLGEAVLLGTGSFWEGVDVRGK
LLSCVIIDKLPFASPDDSLYKARASRVEARGGDPFLEISLPQAVIALKQGAGRLIRDETDRGVLVICDNRLVNRPYGQAF
LQSLPPMARTRDLDEACAFLAAID

Specific function: Unknown

COG id: COG1199

COG function: function code KL; Rad3-related DNA helicases

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 helicase ATP-binding domain [H]

Homologues:

Organism=Escherichia coli, GI1788110, Length=659, Percent_Identity=45.2200303490137, Blast_Score=519, Evalue=1e-148,
Organism=Escherichia coli, GI1787018, Length=686, Percent_Identity=27.4052478134111, Blast_Score=154, Evalue=2e-38,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR014001
- InterPro:   IPR010614
- InterPro:   IPR014013
- InterPro:   IPR006555
- InterPro:   IPR006935 [H]

Pfam domain/function: PF06733 DEAD_2; PF04851 ResIII [H]

EC number: =3.6.4.12 [H]

Molecular weight: Translated: 73085; Mature: 72954

Theoretical pI: Translated: 7.18; Mature: 7.18

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.4 %Cys     (Translated Protein)
1.8 %Met     (Translated Protein)
4.2 %Cys+Met (Translated Protein)
2.4 %Cys     (Mature Protein)
1.7 %Met     (Mature Protein)
4.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSSQSAANNLITRTQAVFDEGGLLSRFIRGYRRREVQQQMAEEVASCLSHTHKLVLEAGT
CCCCHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC
GVGKTFAYLVPALLSGKQVIVSTGSKNLQEQLFYKDLPALLEMLKLHLPVSILKGRSNYL
CCCHHHHHHHHHHHCCCEEEEECCCHHHHHHHHHHHHHHHHHHHHHHCCHHHHCCCHHHH
CQRLMAAQMEAAFSHDEKLLDDLLKLNQFAQTTEDGDLGNLTGVAEDARAISLVASTQDS
HHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHEECCCCC
CTGQRCAFYEDCFTRKARARAMNARLIVVNHHLFFADRVLKDTGFAELLPDVDAVIFDEA
CCCCCHHHHHHHHHHHHHHHHCCCEEEEEECHHHHHHHHHHHCCHHHHCCCCHHHHHCCH
HLLPDIAMQYFGAQLSTGSLRRLLDGIERLTEGELGDTQGLKLLPQRARIKLDAWQNCLL
HHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHCCCCCCCCCCHHCCHHHCEEHHHHHHHHH
DAGSSDFRQLLKDKTAALAAGELIAELSALEALLLANVGRSEPLDDFAVKLPELKQKLER
CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHH
FIACDDPGSAYSIDIGERHLMLRISPIDIAKACSELFSEDTAWVFTSATLQVERSLQFFT
HEECCCCCCEEEEECCCCEEEEEECCHHHHHHHHHHHCCCCCEEEEEHHHHHHHHHHHHH
RELGLTSAKPVSAKRSQSGAGAKSAVCKEVLLDSPFDYPRQSLLCVPRRLGSVANQDAMV
HHHCCCCCCCCCCCCCCCCCCHHHHHHHHHHHCCCCCCCHHHHHHHHHHHCCCCCCCHHH
CQLTEVCLKLIRAAKGRTFILFTSHRMMEAVARSLVGRCHYPLLVQGQGGKQQLLSKFRQ
HHHHHHHHHHHHHCCCCEEEEEECHHHHHHHHHHHHHHCCCCEEEECCCCHHHHHHHHHH
LGEAVLLGTGSFWEGVDVRGKLLSCVIIDKLPFASPDDSLYKARASRVEARGGDPFLEIS
HCCEEEEECCCCCCCCCCHHHHHHHHEECCCCCCCCCHHHHHHHHHHHHCCCCCCEEEEE
LPQAVIALKQGAGRLIRDETDRGVLVICDNRLVNRPYGQAFLQSLPPMARTRDLDEACAF
CHHHHHHHHHCCCCCCCCCCCCCEEEEECCCCCCCCHHHHHHHHCCCHHHHCCHHHHHHH
LAAID
HHHCC
>Mature Secondary Structure 
SSQSAANNLITRTQAVFDEGGLLSRFIRGYRRREVQQQMAEEVASCLSHTHKLVLEAGT
CCCHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC
GVGKTFAYLVPALLSGKQVIVSTGSKNLQEQLFYKDLPALLEMLKLHLPVSILKGRSNYL
CCCHHHHHHHHHHHCCCEEEEECCCHHHHHHHHHHHHHHHHHHHHHHCCHHHHCCCHHHH
CQRLMAAQMEAAFSHDEKLLDDLLKLNQFAQTTEDGDLGNLTGVAEDARAISLVASTQDS
HHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHEECCCCC
CTGQRCAFYEDCFTRKARARAMNARLIVVNHHLFFADRVLKDTGFAELLPDVDAVIFDEA
CCCCCHHHHHHHHHHHHHHHHCCCEEEEEECHHHHHHHHHHHCCHHHHCCCCHHHHHCCH
HLLPDIAMQYFGAQLSTGSLRRLLDGIERLTEGELGDTQGLKLLPQRARIKLDAWQNCLL
HHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHCCCCCCCCCCHHCCHHHCEEHHHHHHHHH
DAGSSDFRQLLKDKTAALAAGELIAELSALEALLLANVGRSEPLDDFAVKLPELKQKLER
CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHH
FIACDDPGSAYSIDIGERHLMLRISPIDIAKACSELFSEDTAWVFTSATLQVERSLQFFT
HEECCCCCCEEEEECCCCEEEEEECCHHHHHHHHHHHCCCCCEEEEEHHHHHHHHHHHHH
RELGLTSAKPVSAKRSQSGAGAKSAVCKEVLLDSPFDYPRQSLLCVPRRLGSVANQDAMV
HHHCCCCCCCCCCCCCCCCCCHHHHHHHHHHHCCCCCCCHHHHHHHHHHHCCCCCCCHHH
CQLTEVCLKLIRAAKGRTFILFTSHRMMEAVARSLVGRCHYPLLVQGQGGKQQLLSKFRQ
HHHHHHHHHHHHHCCCCEEEEEECHHHHHHHHHHHHHHCCCCEEEECCCCHHHHHHHHHH
LGEAVLLGTGSFWEGVDVRGKLLSCVIIDKLPFASPDDSLYKARASRVEARGGDPFLEIS
HCCEEEEECCCCCCCCCCHHHHHHHHEECCCCCCCCCHHHHHHHHHHHHCCCCCCEEEEE
LPQAVIALKQGAGRLIRDETDRGVLVICDNRLVNRPYGQAFLQSLPPMARTRDLDEACAF
CHHHHHHHHHCCCCCCCCCCCCCEEEEECCCCCCCCHHHHHHHHCCCHHHHCCHHHHHHH
LAAID
HHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 9097040; 9278503 [H]