Definition Shewanella amazonensis SB2B chromosome, complete genome.
Accession NC_008700
Length 4,306,142

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The map label for this gene is 119775073

Identifier: 119775073

GI number: 119775073

Start: 2365343

End: 2365636

Strand: Reverse

Name: 119775073

Synonym: Sama_1938

Alternate gene names: NA

Gene position: 2365636-2365343 (Counterclockwise)

Preceding gene: 119775074

Following gene: 119775072

Centisome position: 54.94

GC content: 55.44

Gene sequence:

>294_bases
ATGGTGATTAACGCTGCACAAATTGCGTTTTTTGGGGCAAGTGCCCTAATACCGCGCGCTTTGCCTGCGTCTTCACCCCA
AGGTGACGAAAGCCTTGAGCAGTCCCCCAGCGTTATCGGCGCGCAGGCAAGCACACTCATGGCGGCCTGGGATAGCGGAT
TCACGCCTAATCAACAGCTTAACTATGATGAAACGCCCCAAAGCCGCGGCGCCATTGCTGAGTATTTGTTAACTCAGCAC
GGCGAGCGGCGGGATCAAATCCGTGCCATGGTCGGCATAGATCTCTATGCCTGA

Upstream 100 bases:

>100_bases
GGCTGCACACCAGTGTGGATGATTTGGCGCCTGTGTATCTGCGCGATACTGTGGCCTGGAAGAAATTGCCCGGCCGGGAA
TGAGTTGAGGACTCGCTGAT

Downstream 100 bases:

>100_bases
CATCAAAAAAGTGAATCTAACCTCTGAGCGTACTGCCATAAGCCCTCATCCCGGACGTGGTGTATTCCTGCTGGAACTGG
CTGTCGCAGCTTTTATCACC

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 97; Mature: 97

Protein sequence:

>97_residues
MVINAAQIAFFGASALIPRALPASSPQGDESLEQSPSVIGAQASTLMAAWDSGFTPNQQLNYDETPQSRGAIAEYLLTQH
GERRDQIRAMVGIDLYA

Sequences:

>Translated_97_residues
MVINAAQIAFFGASALIPRALPASSPQGDESLEQSPSVIGAQASTLMAAWDSGFTPNQQLNYDETPQSRGAIAEYLLTQH
GERRDQIRAMVGIDLYA
>Mature_97_residues
MVINAAQIAFFGASALIPRALPASSPQGDESLEQSPSVIGAQASTLMAAWDSGFTPNQQLNYDETPQSRGAIAEYLLTQH
GERRDQIRAMVGIDLYA

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 10395; Mature: 10395

Theoretical pI: Translated: 4.21; Mature: 4.21

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
3.1 %Met     (Translated Protein)
3.1 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
3.1 %Met     (Mature Protein)
3.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MVINAAQIAFFGASALIPRALPASSPQGDESLEQSPSVIGAQASTLMAAWDSGFTPNQQL
CCCCCHHHHHHCCHHHCCCCCCCCCCCCCCHHHCCCCCCCCHHHHHHHHHCCCCCCCCCC
NYDETPQSRGAIAEYLLTQHGERRDQIRAMVGIDLYA
CCCCCCCCHHHHHHHHHHCCCCHHHHHHHHHCCEECC
>Mature Secondary Structure
MVINAAQIAFFGASALIPRALPASSPQGDESLEQSPSVIGAQASTLMAAWDSGFTPNQQL
CCCCCHHHHHHCCHHHCCCCCCCCCCCCCCHHHCCCCCCCCHHHHHHHHHCCCCCCCCCC
NYDETPQSRGAIAEYLLTQHGERRDQIRAMVGIDLYA
CCCCCCCCHHHHHHHHHHCCCCHHHHHHHHHCCEECC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA