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The map label for this gene is yedZ [H]

Identifier: 119775027

GI number: 119775027

Start: 2308090

End: 2308716

Strand: Reverse

Name: yedZ [H]

Synonym: Sama_1892

Alternate gene names: 119775027

Gene position: 2308716-2308090 (Counterclockwise)

Preceding gene: 119775028

Following gene: 119775023

Centisome position: 53.61

GC content: 51.04

Gene sequence:

>627_bases
ATGCGATTGACCCCGGGACGACTGTTTTGGCTAAAGTGCGCACTGCATACGGGGTTTATTTTGCCTTTGTTGTGGCTTGG
ATGGGGTGTTGCACTTAACCAATTGGGCGGCGACCCGGTTCAGTACCTGATTCACTTTACCGGTAAAGGCACGCTTCACG
GGCTGATGCTGACACTGCTGATAACGCCGCTCGCAAAGCGTTTAAAGATGGGACCGTTAATGCAAACCCGGCGTTTGATT
GGTTTGTGGACCTTTAGCTATGGTGTGTTGCATCTACTGGCCTTTGTCAGCCTGGACTTACTGTTTGCCTGGAACATGTT
GTTGACGGAAATTTTAAAGCGCCCGTATTTGTTGGTGGGGATGGCAGGCTTGGTGATTTTAACGGCGCTCGCCGTAACCT
CCTTAAAAAGCCTACAAAGGCGCATGGGGCCCCATTGGCAAAGGCTGCATAATTGGGTGTATCTAGTCGCCTTGCTTGCT
CCTGTACATTACCTTTGGTCGGTAAAATCTGAGATCATCGAGCCCAGCCTGTATTTGCTGCTTTGTCTGTGGTTATTGTG
GCTGCGGCGTGAGAAGCTCCTAAACACCGCCTTCATCCGCAAGGTTTTCAGCCCCTTGTCGAGCTGA

Upstream 100 bases:

>100_bases
GGCTTTTTTCTGCCGAGCGTATCGCGACACGTCCGTTCAACGGTTACGAAGAGCAGGTAGCGCATCTCTATAAAGACTTG
GATTTGAAAAGGTATTTTTA

Downstream 100 bases:

>100_bases
TTTGATGTCGCGATCGCCTCGCTTACAGGCATACATGTTGCGATCGGCAACATTGATAAGCTCTTCTATGCCTGTACCAT
CCTGGGGATAGCAAGCCGCA

Product: putative sulfite oxidase subunit YedZ

Products: NA

Alternate protein names: Flavocytochrome yedZ [H]

Number of amino acids: Translated: 208; Mature: 208

Protein sequence:

>208_residues
MRLTPGRLFWLKCALHTGFILPLLWLGWGVALNQLGGDPVQYLIHFTGKGTLHGLMLTLLITPLAKRLKMGPLMQTRRLI
GLWTFSYGVLHLLAFVSLDLLFAWNMLLTEILKRPYLLVGMAGLVILTALAVTSLKSLQRRMGPHWQRLHNWVYLVALLA
PVHYLWSVKSEIIEPSLYLLLCLWLLWLRREKLLNTAFIRKVFSPLSS

Sequences:

>Translated_208_residues
MRLTPGRLFWLKCALHTGFILPLLWLGWGVALNQLGGDPVQYLIHFTGKGTLHGLMLTLLITPLAKRLKMGPLMQTRRLI
GLWTFSYGVLHLLAFVSLDLLFAWNMLLTEILKRPYLLVGMAGLVILTALAVTSLKSLQRRMGPHWQRLHNWVYLVALLA
PVHYLWSVKSEIIEPSLYLLLCLWLLWLRREKLLNTAFIRKVFSPLSS
>Mature_208_residues
MRLTPGRLFWLKCALHTGFILPLLWLGWGVALNQLGGDPVQYLIHFTGKGTLHGLMLTLLITPLAKRLKMGPLMQTRRLI
GLWTFSYGVLHLLAFVSLDLLFAWNMLLTEILKRPYLLVGMAGLVILTALAVTSLKSLQRRMGPHWQRLHNWVYLVALLA
PVHYLWSVKSEIIEPSLYLLLCLWLLWLRREKLLNTAFIRKVFSPLSS

Specific function: Is probably involved in the electron transfer between its heme and the molybdenum cofactor of the reductase catalytic subunit yedY [H]

COG id: COG2717

COG function: function code S; Predicted membrane protein

Gene ontology:

Cell location: Cell inner membrane; Multi-pass membrane protein [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the yedZ family [H]

Homologues:

Organism=Escherichia coli, GI1788283, Length=194, Percent_Identity=50, Blast_Score=168, Evalue=2e-43,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR013130
- InterPro:   IPR022837 [H]

Pfam domain/function: PF01794 Ferric_reduct [H]

EC number: NA

Molecular weight: Translated: 23892; Mature: 23892

Theoretical pI: Translated: 11.11; Mature: 11.11

Prosite motif: PS00024 HEMOPEXIN

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.0 %Cys     (Translated Protein)
3.4 %Met     (Translated Protein)
4.3 %Cys+Met (Translated Protein)
1.0 %Cys     (Mature Protein)
3.4 %Met     (Mature Protein)
4.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRLTPGRLFWLKCALHTGFILPLLWLGWGVALNQLGGDPVQYLIHFTGKGTLHGLMLTLL
CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHCCCHHHHHHHHHHH
ITPLAKRLKMGPLMQTRRLIGLWTFSYGVLHLLAFVSLDLLFAWNMLLTEILKRPYLLVG
HHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHH
MAGLVILTALAVTSLKSLQRRMGPHWQRLHNWVYLVALLAPVHYLWSVKSEIIEPSLYLL
HHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHH
LCLWLLWLRREKLLNTAFIRKVFSPLSS
HHHHHHHHHHHHHHHHHHHHHHHHHHCC
>Mature Secondary Structure
MRLTPGRLFWLKCALHTGFILPLLWLGWGVALNQLGGDPVQYLIHFTGKGTLHGLMLTLL
CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHCCCHHHHHHHHHHH
ITPLAKRLKMGPLMQTRRLIGLWTFSYGVLHLLAFVSLDLLFAWNMLLTEILKRPYLLVG
HHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHH
MAGLVILTALAVTSLKSLQRRMGPHWQRLHNWVYLVALLAPVHYLWSVKSEIIEPSLYLL
HHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHH
LCLWLLWLRREKLLNTAFIRKVFSPLSS
HHHHHHHHHHHHHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: Mo [C]

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: NA