| Definition | Shewanella amazonensis SB2B chromosome, complete genome. |
|---|---|
| Accession | NC_008700 |
| Length | 4,306,142 |
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The map label for this gene is aprN [H]
Identifier: 119775011
GI number: 119775011
Start: 2291278
End: 2293101
Strand: Direct
Name: aprN [H]
Synonym: Sama_1876
Alternate gene names: 119775011
Gene position: 2291278-2293101 (Clockwise)
Preceding gene: 119775010
Following gene: 119775012
Centisome position: 53.21
GC content: 52.41
Gene sequence:
>1824_bases ATGAAAACAGTGAATAAAACCCTATTAGCACTGGGTATTGGTATGGCCATGGCCGCCAATGCCGCCGATGACAGATACGT TATTCAGGTAGATGCCGGGCATAAAGGCGTGGTGAAGGCCCTCGCCAAACAACTGGGCGGTAAAATTCACGCCGAGGGCA ATCGCTTTTTCTCAGCCACCTTCAGCGGCAAAGATCTTGCGACCGTAAAAGGGTTATTGAACAACCCACACATTCAACTC ATCGAAGAAGATGCCAAACGGGAACTGATGGGCTACAGCGACGATGTGGGCGATCCGCGCAATACACAAATCACCCCTTA TGCAGTCTATCAATCTCAGGCTAATCAACTCACGCTCCAGGCAAACTCAGGCGTCAAAGTCTGTGTAATTGACTCAGGGC TCGATCGTTCAAACCCCGACTTCCTATGGCAAAACATCACGGGTGACAACGACCCCGGCACCGGCAATTGGGATCAAAAT GGTGGCCCCCACGGCACCCACGTTGCCGGCACCATAGGTGCAGCCGATAACGGCTTTGGCGTGGTTGGCATGGCGCCGGG TGTCGACATGCACATCATCAAGGTATTTAACGCCAATGGCTGGGGCTATTCATCCGATCTTGCACTTGCCACCGAGAAGT GTGCTGCAGCAGGGGCAAACATCATCAATATGAGTCTGGGTGGTGGACGTCCCAACAGTACAGAAGAGAATGCCTTCAAG GAGTTCACCAAAAATGGCGGCCTGGTGATTGCAGCAGCAGGTAACGACGGTAACAACGTCAGAACCTACCCGGCTGGCTA TGAGTCAGTCATGATGATTGGCGCCAACAATGCCAATGATGCAATCGCGGACTTTTCCCAGTTTCCTGCCTGCACCATTA TCTACTCAGGTAAGGGCAACAAGAATAATCAGCAGATTATTGATACCACCTGCGTGGAAGTCACCGCAGGGGGCGTTGAT ACCCTGTCCACCTACCCTGCCGATATGGCGGTAGCGTCGGTATTAAACGCTGATGGTCAGGTACTTGGCTCTACCGGAAT GGGCTACGCTGAACAAGGCAATGTCACCGGCAGCGGCTATTACATGGGCCTTGGCAAGGCAATAGATTCAGGCGCCGACG GAAAGGTCTGCCTGATTGATAGAGGCGAAATATCTTTTAATGACAAAGTCATGAATTGCCAAGCCTCCGGTGGTATTGCT GCCGTTATCATCAATAACGTTGCGGGTATGCTGTATGGCACCTTGGGCGCCGACACCACAACCGGTATTCCGGCCGTTGG CGCCACACTGGAAGACCGCAGTGCTATCCTGGCTGCAACCTCAGTTGGCGTAGAGATCAGTAGCTCAGATTATGGCTTTA TGAGCGGAACCTCCATGGCGACCCCAGCCGTGAGTGGTTTGGCAGCCTTATTGTGGTCGAACCATCCAGAATGCAGTGGC AATGACATTCGCGCAGCGCTTAAAGCAACAGCCTTTGATGCCGGCGCCACCGGGAGGGATGACTACTTTGGTTATGGCAT CGTCAAAGTGGCCGACGCCCATCAATACCTGTTGAGCAACCACTGCAGTGCCAAACCCATGGTAGACATCCAACTCACCA CGGCTACGTACTCAGGCAAACGCGGAGAACAGGTTGAACTTAATTGGTCGGGCGCCTCAACCCGCAAGGTCAATGTGTTT CGTAATGGCGTGGTAATTACCGCCACTGCCAACGATGGTAACTTTGTTGATACGCTCAACAACCCTTATGGCATCTACAC TTACCAAATCTGTGAAGATGGCACCGCGAACTGCTCTGACATTTCAAGCGTGACATTCAACTAA
Upstream 100 bases:
>100_bases ATTTCAGGAAATCGCAGTGTCAGAGCAACAGCCGATGGAATTGACTACAAATGCGTTGCGCAACTGGCCTGCTATTTACC AACAACTTTCAGGAACACAA
Downstream 100 bases:
>100_bases CTGCTAAGCCGTATTAAAAGAGCGCCTGAAGGCGCTCTTTTTGTTAATGATACAACGTTATGAATCGCCACTGATTTCCT AGACACCTTTGAGTTAGATA
Product: peptidase S8/S53 subtilisin kexin sedolisin
Products: NA
Alternate protein names: Nattokinase [H]
Number of amino acids: Translated: 607; Mature: 607
Protein sequence:
>607_residues MKTVNKTLLALGIGMAMAANAADDRYVIQVDAGHKGVVKALAKQLGGKIHAEGNRFFSATFSGKDLATVKGLLNNPHIQL IEEDAKRELMGYSDDVGDPRNTQITPYAVYQSQANQLTLQANSGVKVCVIDSGLDRSNPDFLWQNITGDNDPGTGNWDQN GGPHGTHVAGTIGAADNGFGVVGMAPGVDMHIIKVFNANGWGYSSDLALATEKCAAAGANIINMSLGGGRPNSTEENAFK EFTKNGGLVIAAAGNDGNNVRTYPAGYESVMMIGANNANDAIADFSQFPACTIIYSGKGNKNNQQIIDTTCVEVTAGGVD TLSTYPADMAVASVLNADGQVLGSTGMGYAEQGNVTGSGYYMGLGKAIDSGADGKVCLIDRGEISFNDKVMNCQASGGIA AVIINNVAGMLYGTLGADTTTGIPAVGATLEDRSAILAATSVGVEISSSDYGFMSGTSMATPAVSGLAALLWSNHPECSG NDIRAALKATAFDAGATGRDDYFGYGIVKVADAHQYLLSNHCSAKPMVDIQLTTATYSGKRGEQVELNWSGASTRKVNVF RNGVVITATANDGNFVDTLNNPYGIYTYQICEDGTANCSDISSVTFN
Sequences:
>Translated_607_residues MKTVNKTLLALGIGMAMAANAADDRYVIQVDAGHKGVVKALAKQLGGKIHAEGNRFFSATFSGKDLATVKGLLNNPHIQL IEEDAKRELMGYSDDVGDPRNTQITPYAVYQSQANQLTLQANSGVKVCVIDSGLDRSNPDFLWQNITGDNDPGTGNWDQN GGPHGTHVAGTIGAADNGFGVVGMAPGVDMHIIKVFNANGWGYSSDLALATEKCAAAGANIINMSLGGGRPNSTEENAFK EFTKNGGLVIAAAGNDGNNVRTYPAGYESVMMIGANNANDAIADFSQFPACTIIYSGKGNKNNQQIIDTTCVEVTAGGVD TLSTYPADMAVASVLNADGQVLGSTGMGYAEQGNVTGSGYYMGLGKAIDSGADGKVCLIDRGEISFNDKVMNCQASGGIA AVIINNVAGMLYGTLGADTTTGIPAVGATLEDRSAILAATSVGVEISSSDYGFMSGTSMATPAVSGLAALLWSNHPECSG NDIRAALKATAFDAGATGRDDYFGYGIVKVADAHQYLLSNHCSAKPMVDIQLTTATYSGKRGEQVELNWSGASTRKVNVF RNGVVITATANDGNFVDTLNNPYGIYTYQICEDGTANCSDISSVTFN >Mature_607_residues MKTVNKTLLALGIGMAMAANAADDRYVIQVDAGHKGVVKALAKQLGGKIHAEGNRFFSATFSGKDLATVKGLLNNPHIQL IEEDAKRELMGYSDDVGDPRNTQITPYAVYQSQANQLTLQANSGVKVCVIDSGLDRSNPDFLWQNITGDNDPGTGNWDQN GGPHGTHVAGTIGAADNGFGVVGMAPGVDMHIIKVFNANGWGYSSDLALATEKCAAAGANIINMSLGGGRPNSTEENAFK EFTKNGGLVIAAAGNDGNNVRTYPAGYESVMMIGANNANDAIADFSQFPACTIIYSGKGNKNNQQIIDTTCVEVTAGGVD TLSTYPADMAVASVLNADGQVLGSTGMGYAEQGNVTGSGYYMGLGKAIDSGADGKVCLIDRGEISFNDKVMNCQASGGIA AVIINNVAGMLYGTLGADTTTGIPAVGATLEDRSAILAATSVGVEISSSDYGFMSGTSMATPAVSGLAALLWSNHPECSG NDIRAALKATAFDAGATGRDDYFGYGIVKVADAHQYLLSNHCSAKPMVDIQLTTATYSGKRGEQVELNWSGASTRKVNVF RNGVVITATANDGNFVDTLNNPYGIYTYQICEDGTANCSDISSVTFN
Specific function: Subtilisin is an extracellular alkaline serine protease, it catalyzes the hydrolysis of proteins and peptide amides. Subtilisin NAT also has fibrinolytic activity [H]
COG id: COG1404
COG function: function code O; Subtilisin-like serine proteases
Gene ontology:
Cell location: Secreted [H]
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the peptidase S8 family [H]
Homologues:
Organism=Drosophila melanogaster, GI45550681, Length=174, Percent_Identity=31.6091954022989, Blast_Score=67, Evalue=3e-11,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR000209 - InterPro: IPR022398 - InterPro: IPR015500 - InterPro: IPR009020 - InterPro: IPR010259 [H]
Pfam domain/function: PF05922 Inhibitor_I9; PF00082 Peptidase_S8 [H]
EC number: =3.4.21.62 [H]
Molecular weight: Translated: 63051; Mature: 63051
Theoretical pI: Translated: 4.56; Mature: 4.56
Prosite motif: PS00136 SUBTILASE_ASP ; PS00137 SUBTILASE_HIS ; PS00138 SUBTILASE_SER
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.6 %Cys (Translated Protein) 2.8 %Met (Translated Protein) 4.4 %Cys+Met (Translated Protein) 1.6 %Cys (Mature Protein) 2.8 %Met (Mature Protein) 4.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKTVNKTLLALGIGMAMAANAADDRYVIQVDAGHKGVVKALAKQLGGKIHAEGNRFFSAT CCCHHHHHHHHHHHHHHCCCCCCCEEEEEECCCCHHHHHHHHHHHCCEEEECCCEEEEEE FSGKDLATVKGLLNNPHIQLIEEDAKRELMGYSDDVGDPRNTQITPYAVYQSQANQLTLQ ECCCCHHHHHHHHCCCCEEEEEHHHHHHHCCCCCCCCCCCCCEEEEEEEEECCCCEEEEE ANSGVKVCVIDSGLDRSNPDFLWQNITGDNDPGTGNWDQNGGPHGTHVAGTIGAADNGFG ECCCEEEEEEECCCCCCCCCEEEEECCCCCCCCCCCCCCCCCCCCCEEEEEECCCCCCEE VVGMAPGVDMHIIKVFNANGWGYSSDLALATEKCAAAGANIINMSLGGGRPNSTEENAFK EEEECCCCCEEEEEEEECCCCCCCCCHHHHHHHHHHCCCCEEEEECCCCCCCCCHHHHHH EFTKNGGLVIAAAGNDGNNVRTYPAGYESVMMIGANNANDAIADFSQFPACTIIYSGKGN HHHCCCCEEEEEECCCCCCEEECCCCCCEEEEEECCCCCHHHHHHHHCCEEEEEECCCCC KNNQQIIDTTCVEVTAGGVDTLSTYPADMAVASVLNADGQVLGSTGMGYAEQGNVTGSGY CCCCEEEEEEEEEEECCCCCHHHCCCHHHHHHHHHCCCCCEEECCCCCCCCCCCCCCCEE YMGLGKAIDSGADGKVCLIDRGEISFNDKVMNCQASGGIAAVIINNVAGMLYGTLGADTT EEEECHHHCCCCCCCEEEEECCCCCCCCEEEEEECCCCEEEEEEHHHHHHEEEECCCCCC TGIPAVGATLEDRSAILAATSVGVEISSSDYGFMSGTSMATPAVSGLAALLWSNHPECSG CCCCCCCCCCCCCCEEEEEEEECEEECCCCCCEECCCCCCCHHHHHHHHHHHCCCCCCCC NDIRAALKATAFDAGATGRDDYFGYGIVKVADAHQYLLSNHCSAKPMVDIQLTTATYSGK CHHHHEEEEEEECCCCCCCCCCCCEEEEEEECHHHHHHHCCCCCCCEEEEEEEEEEECCC RGEQVELNWSGASTRKVNVFRNGVVITATANDGNFVDTLNNPYGIYTYQICEDGTANCSD CCCEEEEEECCCCCEEEEEEECCEEEEEECCCCCEEECCCCCCEEEEEEEECCCCCCCCC ISSVTFN CCEEECC >Mature Secondary Structure MKTVNKTLLALGIGMAMAANAADDRYVIQVDAGHKGVVKALAKQLGGKIHAEGNRFFSAT CCCHHHHHHHHHHHHHHCCCCCCCEEEEEECCCCHHHHHHHHHHHCCEEEECCCEEEEEE FSGKDLATVKGLLNNPHIQLIEEDAKRELMGYSDDVGDPRNTQITPYAVYQSQANQLTLQ ECCCCHHHHHHHHCCCCEEEEEHHHHHHHCCCCCCCCCCCCCEEEEEEEEECCCCEEEEE ANSGVKVCVIDSGLDRSNPDFLWQNITGDNDPGTGNWDQNGGPHGTHVAGTIGAADNGFG ECCCEEEEEEECCCCCCCCCEEEEECCCCCCCCCCCCCCCCCCCCCEEEEEECCCCCCEE VVGMAPGVDMHIIKVFNANGWGYSSDLALATEKCAAAGANIINMSLGGGRPNSTEENAFK EEEECCCCCEEEEEEEECCCCCCCCCHHHHHHHHHHCCCCEEEEECCCCCCCCCHHHHHH EFTKNGGLVIAAAGNDGNNVRTYPAGYESVMMIGANNANDAIADFSQFPACTIIYSGKGN HHHCCCCEEEEEECCCCCCEEECCCCCCEEEEEECCCCCHHHHHHHHCCEEEEEECCCCC KNNQQIIDTTCVEVTAGGVDTLSTYPADMAVASVLNADGQVLGSTGMGYAEQGNVTGSGY CCCCEEEEEEEEEEECCCCCHHHCCCHHHHHHHHHCCCCCEEECCCCCCCCCCCCCCCEE YMGLGKAIDSGADGKVCLIDRGEISFNDKVMNCQASGGIAAVIINNVAGMLYGTLGADTT EEEECHHHCCCCCCCEEEEECCCCCCCCEEEEEECCCCEEEEEEHHHHHHEEEECCCCCC TGIPAVGATLEDRSAILAATSVGVEISSSDYGFMSGTSMATPAVSGLAALLWSNHPECSG CCCCCCCCCCCCCCEEEEEEEECEEECCCCCCEECCCCCCCHHHHHHHHHHHCCCCCCCC NDIRAALKATAFDAGATGRDDYFGYGIVKVADAHQYLLSNHCSAKPMVDIQLTTATYSGK CHHHHEEEEEEECCCCCCCCCCCCEEEEEEECHHHHHHHCCCCCCCEEEEEEEEEEECCC RGEQVELNWSGASTRKVNVFRNGVVITATANDGNFVDTLNNPYGIYTYQICEDGTANCSD CCCEEEEEECCCCCEEEEEEECCEEEEEECCCCCEEECCCCCCEEEEEEEECCCCCCCCC ISSVTFN CCEEECC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 1369081 [H]