Definition Shewanella amazonensis SB2B chromosome, complete genome.
Accession NC_008700
Length 4,306,142

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The map label for this gene is 119774988

Identifier: 119774988

GI number: 119774988

Start: 2257149

End: 2258933

Strand: Reverse

Name: 119774988

Synonym: Sama_1853

Alternate gene names: NA

Gene position: 2258933-2257149 (Counterclockwise)

Preceding gene: 119774989

Following gene: 119774979

Centisome position: 52.46

GC content: 54.23

Gene sequence:

>1785_bases
ATGTCCTCCCCGGCGCTGTCTGTCAATCATGCGGCGTCAAACGGTGTTGCCCGGCCATCTTTCGCCGGGCATCCTGATAC
CGCTGAGACTGCGAGAAATTCGTTCTCGTCGGCGCCCCTTGTATCCGAAGTCTCACTAAAGTCCCCATCAAATCATGCTT
CTTCCCACTCAGTGTCTTTCCATAGTGGGGGCGGTGTTTCTACGCCAGCTATTTCCCACGGAGCGCCTTCATCCGGCATG
ACACAGACTGCGGCGTCAGGTGGCGTAGCGTCAGTTTCAGTGGGCACTAACCAGATATTAAAATCATCACCGTCTTCAGC
GACGTTGCCATCAGCACCGGTCGCGACTGGAACGGCTGGACAGGTCAAACACAGGGCGTCAGGTTCACTGCAAGGAGGCT
CAGCACCCACTGCCTCGGCTGCCACTCCCGGTTTTAATCTGATTACTGGCGCGCAGAGTATCGATGCGTTGCCGGGTAGA
ACCCAATTTGCTTCAGCCATTTCTGCTCAAGGTTATTCTCCAGTGAATCAAGGTTCTGATGCTCGGTTCAGTCAGGTTCA
GAACACTGGACTCACAGGTGCTGAATTTACAAGCTCGGATGAGCACTCAGTCGCAGATATCTTTATTTCCCCAAATCAAT
CTTCTGTTGATGGTGTCACAACGAGTAGTGCTGAAACGGGGCGCGTTGTCAGTCAAGGAGACGGTGGAGGCGGTTCGAAC
GCAGTTTTTGATACAGGTACGCCTGTGGGTGTTCAGTTTGCACGAGAAGACGCGTCAAATTCAGCTGTCGCTGCCCAGGA
AGCTGAGAAGGCTGCCAAAGAAGCAAAGCAACAAAAGCTTGCTGAGGCGCTGGGTGGAGAGCGGGAGCCCTTCTCTGAAC
AAAAGGTTGCCAGGCAGCAAGTGGAACAAGACAGCAATGCTCAGGCAATGGCCCGCGAAAACGACATCGAGCGTCGCGAG
CAGGTAAAAATACGTCAGCAGGAGATGGAGGTGCGTCAGCTTGAAGCCAGACAAGCGGAAGTACTGGCACATGAGAGAGC
CCACGCCGCCGTTGGTGGACAATTTGCCCGCGCGCCCAATTTTGAATATGAGCTTGGTCCTGATGGTAAGAGATATGCCA
CGGGGGGAGAGGTGTCGATTGATATTGCCAGCGTCCAAGGCAACCCCCAGGCGACAATCAACAAGATGCAGCAGGTATAT
GCCGCAGCCATGGCGCCGGTAAATCCGTCGCAAGCGGATCTGCGTGTGGCGGCTGAAGCACTCAGGAACATTGAGTTGGC
CAAGGACGAATTGGCGTCCGAGCGGCTGGCGGCAATGCCCACTCAGGACGAAATTTCCCCATTATTGGACGCTCAAAACG
CCATTGATGAAGTGCCGGTGTTCGAGCCGGTTACCCCTTCTTTGGGCACCAACCTGGATAAATCCGGCGCTTTGGGCAAA
GAGCAGAGTGACAGCGGCTTTGTCGATGCATTGTCGGCACGTATTACCGCCGCTTTGGCTCAAACCCTTGAAAAGGATAG
TGAGGGAAATAAAACAGAGAACCAGGGTAACGACGACAAAGGCACTGAGACTAGCCTAGTTGCCGTCGATACCGGGTCGG
ATGGCTCAGGCTCGGCTTCTGATGGCTATGGCCAAACACTTGATAATTCACGCACCACGGATATCAGTAAGCTTGGGCCA
CCGAGAGCGATCCTTGCGTATCTCGACACCAACGAGAAGACACAAATCGAAAACGATAAGTCCCAACCTAATAAGGCGGC
ATCATCGCTACTGGCGCTGGCATGA

Upstream 100 bases:

>100_bases
AAGCGACCCAGTCGGTTAATCAGGCTGAGGCATCGGCCGAAGTGATTGAAACGGCCGATGAGACAATTGGCACCATCATA
GACATCAAAGTGTAATTGCC

Downstream 100 bases:

>100_bases
GATACCATGCTGGGCAAGAATGAGCAGCTCCAACGCCTCACCCGCAGGCCCCTGATCGTCTCTGCTAGGGACAACCAGAT
TAATGGGGATCTTCCGGCTT

Product: hypothetical protein

Products: NA

Alternate protein names: Protein-Glutamate O-Methyltransferase

Number of amino acids: Translated: 594; Mature: 593

Protein sequence:

>594_residues
MSSPALSVNHAASNGVARPSFAGHPDTAETARNSFSSAPLVSEVSLKSPSNHASSHSVSFHSGGGVSTPAISHGAPSSGM
TQTAASGGVASVSVGTNQILKSSPSSATLPSAPVATGTAGQVKHRASGSLQGGSAPTASAATPGFNLITGAQSIDALPGR
TQFASAISAQGYSPVNQGSDARFSQVQNTGLTGAEFTSSDEHSVADIFISPNQSSVDGVTTSSAETGRVVSQGDGGGGSN
AVFDTGTPVGVQFAREDASNSAVAAQEAEKAAKEAKQQKLAEALGGEREPFSEQKVARQQVEQDSNAQAMARENDIERRE
QVKIRQQEMEVRQLEARQAEVLAHERAHAAVGGQFARAPNFEYELGPDGKRYATGGEVSIDIASVQGNPQATINKMQQVY
AAAMAPVNPSQADLRVAAEALRNIELAKDELASERLAAMPTQDEISPLLDAQNAIDEVPVFEPVTPSLGTNLDKSGALGK
EQSDSGFVDALSARITAALAQTLEKDSEGNKTENQGNDDKGTETSLVAVDTGSDGSGSASDGYGQTLDNSRTTDISKLGP
PRAILAYLDTNEKTQIENDKSQPNKAASSLLALA

Sequences:

>Translated_594_residues
MSSPALSVNHAASNGVARPSFAGHPDTAETARNSFSSAPLVSEVSLKSPSNHASSHSVSFHSGGGVSTPAISHGAPSSGM
TQTAASGGVASVSVGTNQILKSSPSSATLPSAPVATGTAGQVKHRASGSLQGGSAPTASAATPGFNLITGAQSIDALPGR
TQFASAISAQGYSPVNQGSDARFSQVQNTGLTGAEFTSSDEHSVADIFISPNQSSVDGVTTSSAETGRVVSQGDGGGGSN
AVFDTGTPVGVQFAREDASNSAVAAQEAEKAAKEAKQQKLAEALGGEREPFSEQKVARQQVEQDSNAQAMARENDIERRE
QVKIRQQEMEVRQLEARQAEVLAHERAHAAVGGQFARAPNFEYELGPDGKRYATGGEVSIDIASVQGNPQATINKMQQVY
AAAMAPVNPSQADLRVAAEALRNIELAKDELASERLAAMPTQDEISPLLDAQNAIDEVPVFEPVTPSLGTNLDKSGALGK
EQSDSGFVDALSARITAALAQTLEKDSEGNKTENQGNDDKGTETSLVAVDTGSDGSGSASDGYGQTLDNSRTTDISKLGP
PRAILAYLDTNEKTQIENDKSQPNKAASSLLALA
>Mature_593_residues
SSPALSVNHAASNGVARPSFAGHPDTAETARNSFSSAPLVSEVSLKSPSNHASSHSVSFHSGGGVSTPAISHGAPSSGMT
QTAASGGVASVSVGTNQILKSSPSSATLPSAPVATGTAGQVKHRASGSLQGGSAPTASAATPGFNLITGAQSIDALPGRT
QFASAISAQGYSPVNQGSDARFSQVQNTGLTGAEFTSSDEHSVADIFISPNQSSVDGVTTSSAETGRVVSQGDGGGGSNA
VFDTGTPVGVQFAREDASNSAVAAQEAEKAAKEAKQQKLAEALGGEREPFSEQKVARQQVEQDSNAQAMARENDIERREQ
VKIRQQEMEVRQLEARQAEVLAHERAHAAVGGQFARAPNFEYELGPDGKRYATGGEVSIDIASVQGNPQATINKMQQVYA
AAMAPVNPSQADLRVAAEALRNIELAKDELASERLAAMPTQDEISPLLDAQNAIDEVPVFEPVTPSLGTNLDKSGALGKE
QSDSGFVDALSARITAALAQTLEKDSEGNKTENQGNDDKGTETSLVAVDTGSDGSGSASDGYGQTLDNSRTTDISKLGPP
RAILAYLDTNEKTQIENDKSQPNKAASSLLALA

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 61027; Mature: 60896

Theoretical pI: Translated: 4.58; Mature: 4.58

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
1.2 %Met     (Translated Protein)
1.2 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
1.0 %Met     (Mature Protein)
1.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSSPALSVNHAASNGVARPSFAGHPDTAETARNSFSSAPLVSEVSLKSPSNHASSHSVSF
CCCCCCEECCCCCCCCCCCCCCCCCCHHHHHHHCCCCCCCHHEEECCCCCCCCCCCEEEE
HSGGGVSTPAISHGAPSSGMTQTAASGGVASVSVGTNQILKSSPSSATLPSAPVATGTAG
ECCCCCCCCCCCCCCCCCCCCHHHCCCCEEEEECCHHHHHHCCCCCCCCCCCCCCCCCCH
QVKHRASGSLQGGSAPTASAATPGFNLITGAQSIDALPGRTQFASAISAQGYSPVNQGSD
HHHHHCCCCCCCCCCCCCCCCCCCCCEEECCHHHCCCCCHHHHHHHHHHCCCCCCCCCCC
ARFSQVQNTGLTGAEFTSSDEHSVADIFISPNQSSVDGVTTSSAETGRVVSQGDGGGGSN
HHHHHHHHCCCCCCCCCCCCCCCEEEEEECCCCCCCCCCCCCCCCCCCEEECCCCCCCCC
AVFDTGTPVGVQFAREDASNSAVAAQEAEKAAKEAKQQKLAEALGGEREPFSEQKVARQQ
CEEECCCCCCEEEECCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHH
VEQDSNAQAMARENDIERREQVKIRQQEMEVRQLEARQAEVLAHERAHAAVGGQFARAPN
HHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHCCCC
FEYELGPDGKRYATGGEVSIDIASVQGNPQATINKMQQVYAAAMAPVNPSQADLRVAAEA
CCEEECCCCCEEECCCEEEEEEEECCCCCHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHH
LRNIELAKDELASERLAAMPTQDEISPLLDAQNAIDEVPVFEPVTPSLGTNLDKSGALGK
HHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHCCCCCCCCCCHHCCCCCCCCCCCC
EQSDSGFVDALSARITAALAQTLEKDSEGNKTENQGNDDKGTETSLVAVDTGSDGSGSAS
CCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCEEEEEEECCCCCCCCCC
DGYGQTLDNSRTTDISKLGPPRAILAYLDTNEKTQIENDKSQPNKAASSLLALA
CCCCCCCCCCCCCCHHHCCCCCEEEEEECCCCCCCCCCCCCCHHHHHHHHHHCC
>Mature Secondary Structure 
SSPALSVNHAASNGVARPSFAGHPDTAETARNSFSSAPLVSEVSLKSPSNHASSHSVSF
CCCCCEECCCCCCCCCCCCCCCCCCHHHHHHHCCCCCCCHHEEECCCCCCCCCCCEEEE
HSGGGVSTPAISHGAPSSGMTQTAASGGVASVSVGTNQILKSSPSSATLPSAPVATGTAG
ECCCCCCCCCCCCCCCCCCCCHHHCCCCEEEEECCHHHHHHCCCCCCCCCCCCCCCCCCH
QVKHRASGSLQGGSAPTASAATPGFNLITGAQSIDALPGRTQFASAISAQGYSPVNQGSD
HHHHHCCCCCCCCCCCCCCCCCCCCCEEECCHHHCCCCCHHHHHHHHHHCCCCCCCCCCC
ARFSQVQNTGLTGAEFTSSDEHSVADIFISPNQSSVDGVTTSSAETGRVVSQGDGGGGSN
HHHHHHHHCCCCCCCCCCCCCCCEEEEEECCCCCCCCCCCCCCCCCCCEEECCCCCCCCC
AVFDTGTPVGVQFAREDASNSAVAAQEAEKAAKEAKQQKLAEALGGEREPFSEQKVARQQ
CEEECCCCCCEEEECCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHH
VEQDSNAQAMARENDIERREQVKIRQQEMEVRQLEARQAEVLAHERAHAAVGGQFARAPN
HHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHCCCC
FEYELGPDGKRYATGGEVSIDIASVQGNPQATINKMQQVYAAAMAPVNPSQADLRVAAEA
CCEEECCCCCEEECCCEEEEEEEECCCCCHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHH
LRNIELAKDELASERLAAMPTQDEISPLLDAQNAIDEVPVFEPVTPSLGTNLDKSGALGK
HHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHCCCCCCCCCCHHCCCCCCCCCCCC
EQSDSGFVDALSARITAALAQTLEKDSEGNKTENQGNDDKGTETSLVAVDTGSDGSGSAS
CCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCEEEEEEECCCCCCCCCC
DGYGQTLDNSRTTDISKLGPPRAILAYLDTNEKTQIENDKSQPNKAASSLLALA
CCCCCCCCCCCCCCHHHCCCCCEEEEEECCCCCCCCCCCCCCHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA