Definition Shewanella amazonensis SB2B chromosome, complete genome.
Accession NC_008700
Length 4,306,142

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The map label for this gene is 119774984

Identifier: 119774984

GI number: 119774984

Start: 2252297

End: 2253253

Strand: Direct

Name: 119774984

Synonym: Sama_1849

Alternate gene names: NA

Gene position: 2252297-2253253 (Clockwise)

Preceding gene: 119774983

Following gene: 119774985

Centisome position: 52.3

GC content: 53.92

Gene sequence:

>957_bases
ATGAAATTTGCCTGGCCTTGGGAGCTTCGCCGCGCGGGTGTGCTCAATATGAACAAGCGCAATATCGACTTTATCGGTCG
ATATAACCCGCGAAAATACTATCAGCGGGTGGATGACAAACTGACCACCAAGCAGCTGGCCCTTGCCAACGACATCGCAG
TACCGGATTTGATTGGTGTGGTGCAGGAGCAGCACGAGATTGCCGAAATCCCGGAAATGGTACAGGGGCGCGGCGGCTTT
GTGATTAAGCCCGCCAAGGGCTCCGGGGGCAAAGGGATTTTGGTGATCACCAAGGTCGAAAACGGTCGCTACTACAAACC
CAGTGGCAATGAAGTCACACCCAGCGAAATCGACCGCCATGTCTCCAATATCTTAAGTGGCCTCTTCTCTCTTGGCGGCA
AACCCGATGTCGCCATTGTAGAAGGGCTTATTCAGTTTGATCCCGTATTCGATGGCTACAGCTATGAAGGGGTACCGGAT
ATCCGTTTGATTGTGTTCAAGGGATATCCTGTAATGGGCATGTTGCGCCTGTCTACCGCAGCGTCCGATGGCAAGGCTAA
CCTGCACCAGGGCGCGGTGGGGGTTGGCATTGATATCGCCACAGGTAAAGGCCTCAGAGCAGTGCAGTTTAACGAGCCTA
TCGAGTTTCACCCCGACACAGGCAAGCGCCTGATGGACATTCAGGTGCCAAATTGGGATACCCTGCTGACCACCGCCTCC
AGTGCCTATGAAATGTGTGAGCTTGGTTATCTTGGTACCGATATGGTGCTGGACAGCGAAAAAGGCCCTCTGCTGCTGGA
GCTAAACGCCCGACCGGGTCTCGCCATACAAATCGCCAACGGCAAGGGATTGCTGCCAAGACTTAAACACGTGGAATCGC
TCGGCAACAAGTTTATGGATGTGAATGACAGGGTGGCCTATGCCAAAGTGCATTTCGGCGCTCACGCTGACCGCTAG

Upstream 100 bases:

>100_bases
ATCCACCTGGTGATCCTGGCGTTGGTGATGTTGATGGGCCAATACACGGGCTATCGCCTGCTCGAGCTTAAGCGCTTTAA
ACCCCTGGCGGGAGAATAAC

Downstream 100 bases:

>100_bases
TCTCTGGTGCAGTACTGCGATTGCCAATCCTGTGATGCTGCTGGCGGAGCAATGCCAGCAGCTGACCCTGGCAAGTGACT
TCGACGCAGCCTTCAACCCG

Product: alpha-L-glutamate ligase-like protein

Products: NA

Alternate protein names: Alpha-L-Glutamate Ligase; Alpha-L-Glutamate Ligase-Related Protein; Alpha-L-Glutamate Ligase Family Protein; Glutathione Synthase/Ribosomal; Glutathione Synthase/Ribosomal Protein; Ketopantoate Hydroxymethyltransferase; Glutathione Synthase/Ribosomal Glutaminyl Transferase; Alpha-L-Glutamate Ligase Homolog

Number of amino acids: Translated: 318; Mature: 318

Protein sequence:

>318_residues
MKFAWPWELRRAGVLNMNKRNIDFIGRYNPRKYYQRVDDKLTTKQLALANDIAVPDLIGVVQEQHEIAEIPEMVQGRGGF
VIKPAKGSGGKGILVITKVENGRYYKPSGNEVTPSEIDRHVSNILSGLFSLGGKPDVAIVEGLIQFDPVFDGYSYEGVPD
IRLIVFKGYPVMGMLRLSTAASDGKANLHQGAVGVGIDIATGKGLRAVQFNEPIEFHPDTGKRLMDIQVPNWDTLLTTAS
SAYEMCELGYLGTDMVLDSEKGPLLLELNARPGLAIQIANGKGLLPRLKHVESLGNKFMDVNDRVAYAKVHFGAHADR

Sequences:

>Translated_318_residues
MKFAWPWELRRAGVLNMNKRNIDFIGRYNPRKYYQRVDDKLTTKQLALANDIAVPDLIGVVQEQHEIAEIPEMVQGRGGF
VIKPAKGSGGKGILVITKVENGRYYKPSGNEVTPSEIDRHVSNILSGLFSLGGKPDVAIVEGLIQFDPVFDGYSYEGVPD
IRLIVFKGYPVMGMLRLSTAASDGKANLHQGAVGVGIDIATGKGLRAVQFNEPIEFHPDTGKRLMDIQVPNWDTLLTTAS
SAYEMCELGYLGTDMVLDSEKGPLLLELNARPGLAIQIANGKGLLPRLKHVESLGNKFMDVNDRVAYAKVHFGAHADR
>Mature_318_residues
MKFAWPWELRRAGVLNMNKRNIDFIGRYNPRKYYQRVDDKLTTKQLALANDIAVPDLIGVVQEQHEIAEIPEMVQGRGGF
VIKPAKGSGGKGILVITKVENGRYYKPSGNEVTPSEIDRHVSNILSGLFSLGGKPDVAIVEGLIQFDPVFDGYSYEGVPD
IRLIVFKGYPVMGMLRLSTAASDGKANLHQGAVGVGIDIATGKGLRAVQFNEPIEFHPDTGKRLMDIQVPNWDTLLTTAS
SAYEMCELGYLGTDMVLDSEKGPLLLELNARPGLAIQIANGKGLLPRLKHVESLGNKFMDVNDRVAYAKVHFGAHADR

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 34932; Mature: 34932

Theoretical pI: Translated: 7.78; Mature: 7.78

Prosite motif: PS50975 ATP_GRASP

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.3 %Cys     (Translated Protein)
2.8 %Met     (Translated Protein)
3.1 %Cys+Met (Translated Protein)
0.3 %Cys     (Mature Protein)
2.8 %Met     (Mature Protein)
3.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKFAWPWELRRAGVLNMNKRNIDFIGRYNPRKYYQRVDDKLTTKQLALANDIAVPDLIGV
CCCCCCHHHHCCCEEECCCCCCEEEECCCHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHH
VQEQHEIAEIPEMVQGRGGFVIKPAKGSGGKGILVITKVENGRYYKPSGNEVTPSEIDRH
HHHHHHHHHHHHHHCCCCCEEEEECCCCCCCEEEEEEEECCCEEECCCCCCCCHHHHHHH
VSNILSGLFSLGGKPDVAIVEGLIQFDPVFDGYSYEGVPDIRLIVFKGYPVMGMLRLSTA
HHHHHHHHHHCCCCCCHHHHHHHHHHCCCCCCCCCCCCCCEEEEEEECCCCEEEEEEECC
ASDGKANLHQGAVGVGIDIATGKGLRAVQFNEPIEFHPDTGKRLMDIQVPNWDTLLTTAS
CCCCCCCCCCCCEEEEEEEECCCCEEEEEECCCEEECCCCCCEEEEEECCCCCCEEHHHH
SAYEMCELGYLGTDMVLDSEKGPLLLELNARPGLAIQIANGKGLLPRLKHVESLGNKFMD
HHHHHHHCCCCCCCEEEECCCCCEEEEECCCCCEEEEECCCCCCCHHHHHHHHHHHHHCC
VNDRVAYAKVHFGAHADR
CCCCEEEEEEEECCCCCC
>Mature Secondary Structure
MKFAWPWELRRAGVLNMNKRNIDFIGRYNPRKYYQRVDDKLTTKQLALANDIAVPDLIGV
CCCCCCHHHHCCCEEECCCCCCEEEECCCHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHH
VQEQHEIAEIPEMVQGRGGFVIKPAKGSGGKGILVITKVENGRYYKPSGNEVTPSEIDRH
HHHHHHHHHHHHHHCCCCCEEEEECCCCCCCEEEEEEEECCCEEECCCCCCCCHHHHHHH
VSNILSGLFSLGGKPDVAIVEGLIQFDPVFDGYSYEGVPDIRLIVFKGYPVMGMLRLSTA
HHHHHHHHHHCCCCCCHHHHHHHHHHCCCCCCCCCCCCCCEEEEEEECCCCEEEEEEECC
ASDGKANLHQGAVGVGIDIATGKGLRAVQFNEPIEFHPDTGKRLMDIQVPNWDTLLTTAS
CCCCCCCCCCCCEEEEEEEECCCCEEEEEECCCEEECCCCCCEEEEEECCCCCCEEHHHH
SAYEMCELGYLGTDMVLDSEKGPLLLELNARPGLAIQIANGKGLLPRLKHVESLGNKFMD
HHHHHHHCCCCCCCEEEECCCCCEEEEECCCCCEEEEECCCCCCCHHHHHHHHHHHHHCC
VNDRVAYAKVHFGAHADR
CCCCEEEEEEEECCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA