| Definition | Shewanella amazonensis SB2B chromosome, complete genome. |
|---|---|
| Accession | NC_008700 |
| Length | 4,306,142 |
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The map label for this gene is 119774984
Identifier: 119774984
GI number: 119774984
Start: 2252297
End: 2253253
Strand: Direct
Name: 119774984
Synonym: Sama_1849
Alternate gene names: NA
Gene position: 2252297-2253253 (Clockwise)
Preceding gene: 119774983
Following gene: 119774985
Centisome position: 52.3
GC content: 53.92
Gene sequence:
>957_bases ATGAAATTTGCCTGGCCTTGGGAGCTTCGCCGCGCGGGTGTGCTCAATATGAACAAGCGCAATATCGACTTTATCGGTCG ATATAACCCGCGAAAATACTATCAGCGGGTGGATGACAAACTGACCACCAAGCAGCTGGCCCTTGCCAACGACATCGCAG TACCGGATTTGATTGGTGTGGTGCAGGAGCAGCACGAGATTGCCGAAATCCCGGAAATGGTACAGGGGCGCGGCGGCTTT GTGATTAAGCCCGCCAAGGGCTCCGGGGGCAAAGGGATTTTGGTGATCACCAAGGTCGAAAACGGTCGCTACTACAAACC CAGTGGCAATGAAGTCACACCCAGCGAAATCGACCGCCATGTCTCCAATATCTTAAGTGGCCTCTTCTCTCTTGGCGGCA AACCCGATGTCGCCATTGTAGAAGGGCTTATTCAGTTTGATCCCGTATTCGATGGCTACAGCTATGAAGGGGTACCGGAT ATCCGTTTGATTGTGTTCAAGGGATATCCTGTAATGGGCATGTTGCGCCTGTCTACCGCAGCGTCCGATGGCAAGGCTAA CCTGCACCAGGGCGCGGTGGGGGTTGGCATTGATATCGCCACAGGTAAAGGCCTCAGAGCAGTGCAGTTTAACGAGCCTA TCGAGTTTCACCCCGACACAGGCAAGCGCCTGATGGACATTCAGGTGCCAAATTGGGATACCCTGCTGACCACCGCCTCC AGTGCCTATGAAATGTGTGAGCTTGGTTATCTTGGTACCGATATGGTGCTGGACAGCGAAAAAGGCCCTCTGCTGCTGGA GCTAAACGCCCGACCGGGTCTCGCCATACAAATCGCCAACGGCAAGGGATTGCTGCCAAGACTTAAACACGTGGAATCGC TCGGCAACAAGTTTATGGATGTGAATGACAGGGTGGCCTATGCCAAAGTGCATTTCGGCGCTCACGCTGACCGCTAG
Upstream 100 bases:
>100_bases ATCCACCTGGTGATCCTGGCGTTGGTGATGTTGATGGGCCAATACACGGGCTATCGCCTGCTCGAGCTTAAGCGCTTTAA ACCCCTGGCGGGAGAATAAC
Downstream 100 bases:
>100_bases TCTCTGGTGCAGTACTGCGATTGCCAATCCTGTGATGCTGCTGGCGGAGCAATGCCAGCAGCTGACCCTGGCAAGTGACT TCGACGCAGCCTTCAACCCG
Product: alpha-L-glutamate ligase-like protein
Products: NA
Alternate protein names: Alpha-L-Glutamate Ligase; Alpha-L-Glutamate Ligase-Related Protein; Alpha-L-Glutamate Ligase Family Protein; Glutathione Synthase/Ribosomal; Glutathione Synthase/Ribosomal Protein; Ketopantoate Hydroxymethyltransferase; Glutathione Synthase/Ribosomal Glutaminyl Transferase; Alpha-L-Glutamate Ligase Homolog
Number of amino acids: Translated: 318; Mature: 318
Protein sequence:
>318_residues MKFAWPWELRRAGVLNMNKRNIDFIGRYNPRKYYQRVDDKLTTKQLALANDIAVPDLIGVVQEQHEIAEIPEMVQGRGGF VIKPAKGSGGKGILVITKVENGRYYKPSGNEVTPSEIDRHVSNILSGLFSLGGKPDVAIVEGLIQFDPVFDGYSYEGVPD IRLIVFKGYPVMGMLRLSTAASDGKANLHQGAVGVGIDIATGKGLRAVQFNEPIEFHPDTGKRLMDIQVPNWDTLLTTAS SAYEMCELGYLGTDMVLDSEKGPLLLELNARPGLAIQIANGKGLLPRLKHVESLGNKFMDVNDRVAYAKVHFGAHADR
Sequences:
>Translated_318_residues MKFAWPWELRRAGVLNMNKRNIDFIGRYNPRKYYQRVDDKLTTKQLALANDIAVPDLIGVVQEQHEIAEIPEMVQGRGGF VIKPAKGSGGKGILVITKVENGRYYKPSGNEVTPSEIDRHVSNILSGLFSLGGKPDVAIVEGLIQFDPVFDGYSYEGVPD IRLIVFKGYPVMGMLRLSTAASDGKANLHQGAVGVGIDIATGKGLRAVQFNEPIEFHPDTGKRLMDIQVPNWDTLLTTAS SAYEMCELGYLGTDMVLDSEKGPLLLELNARPGLAIQIANGKGLLPRLKHVESLGNKFMDVNDRVAYAKVHFGAHADR >Mature_318_residues MKFAWPWELRRAGVLNMNKRNIDFIGRYNPRKYYQRVDDKLTTKQLALANDIAVPDLIGVVQEQHEIAEIPEMVQGRGGF VIKPAKGSGGKGILVITKVENGRYYKPSGNEVTPSEIDRHVSNILSGLFSLGGKPDVAIVEGLIQFDPVFDGYSYEGVPD IRLIVFKGYPVMGMLRLSTAASDGKANLHQGAVGVGIDIATGKGLRAVQFNEPIEFHPDTGKRLMDIQVPNWDTLLTTAS SAYEMCELGYLGTDMVLDSEKGPLLLELNARPGLAIQIANGKGLLPRLKHVESLGNKFMDVNDRVAYAKVHFGAHADR
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 34932; Mature: 34932
Theoretical pI: Translated: 7.78; Mature: 7.78
Prosite motif: PS50975 ATP_GRASP
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.3 %Cys (Translated Protein) 2.8 %Met (Translated Protein) 3.1 %Cys+Met (Translated Protein) 0.3 %Cys (Mature Protein) 2.8 %Met (Mature Protein) 3.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKFAWPWELRRAGVLNMNKRNIDFIGRYNPRKYYQRVDDKLTTKQLALANDIAVPDLIGV CCCCCCHHHHCCCEEECCCCCCEEEECCCHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHH VQEQHEIAEIPEMVQGRGGFVIKPAKGSGGKGILVITKVENGRYYKPSGNEVTPSEIDRH HHHHHHHHHHHHHHCCCCCEEEEECCCCCCCEEEEEEEECCCEEECCCCCCCCHHHHHHH VSNILSGLFSLGGKPDVAIVEGLIQFDPVFDGYSYEGVPDIRLIVFKGYPVMGMLRLSTA HHHHHHHHHHCCCCCCHHHHHHHHHHCCCCCCCCCCCCCCEEEEEEECCCCEEEEEEECC ASDGKANLHQGAVGVGIDIATGKGLRAVQFNEPIEFHPDTGKRLMDIQVPNWDTLLTTAS CCCCCCCCCCCCEEEEEEEECCCCEEEEEECCCEEECCCCCCEEEEEECCCCCCEEHHHH SAYEMCELGYLGTDMVLDSEKGPLLLELNARPGLAIQIANGKGLLPRLKHVESLGNKFMD HHHHHHHCCCCCCCEEEECCCCCEEEEECCCCCEEEEECCCCCCCHHHHHHHHHHHHHCC VNDRVAYAKVHFGAHADR CCCCEEEEEEEECCCCCC >Mature Secondary Structure MKFAWPWELRRAGVLNMNKRNIDFIGRYNPRKYYQRVDDKLTTKQLALANDIAVPDLIGV CCCCCCHHHHCCCEEECCCCCCEEEECCCHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHH VQEQHEIAEIPEMVQGRGGFVIKPAKGSGGKGILVITKVENGRYYKPSGNEVTPSEIDRH HHHHHHHHHHHHHHCCCCCEEEEECCCCCCCEEEEEEEECCCEEECCCCCCCCHHHHHHH VSNILSGLFSLGGKPDVAIVEGLIQFDPVFDGYSYEGVPDIRLIVFKGYPVMGMLRLSTA HHHHHHHHHHCCCCCCHHHHHHHHHHCCCCCCCCCCCCCCEEEEEEECCCCEEEEEEECC ASDGKANLHQGAVGVGIDIATGKGLRAVQFNEPIEFHPDTGKRLMDIQVPNWDTLLTTAS CCCCCCCCCCCCEEEEEEEECCCCEEEEEECCCEEECCCCCCEEEEEECCCCCCEEHHHH SAYEMCELGYLGTDMVLDSEKGPLLLELNARPGLAIQIANGKGLLPRLKHVESLGNKFMD HHHHHHHCCCCCCCEEEECCCCCEEEEECCCCCEEEEECCCCCCCHHHHHHHHHHHHHCC VNDRVAYAKVHFGAHADR CCCCEEEEEEEECCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA