Definition Shewanella amazonensis SB2B chromosome, complete genome.
Accession NC_008700
Length 4,306,142

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The map label for this gene is 119774821

Identifier: 119774821

GI number: 119774821

Start: 2059635

End: 2059970

Strand: Direct

Name: 119774821

Synonym: Sama_1685

Alternate gene names: NA

Gene position: 2059635-2059970 (Clockwise)

Preceding gene: 119774819

Following gene: 119774824

Centisome position: 47.83

GC content: 49.11

Gene sequence:

>336_bases
ATGAGTAAACTGCGTATTTTCCAGTTACTGCTGGCGGGTTTGTCCATTTTGGGATGGGCGCTGGCGATATGGGCTTTGAT
GCTGTTTCACGAAGCAAGACCTGATCGTGCTGTAGGTTATTTCCTGTCAAAAGGTGCAACCGTAAGGTTATTCTGGGAGC
CGTCGCTCACCCTGCGTCTGGAGCAGGTCATCTGGATAGTGTGCGGTGTGAGTCTGGTGAGCCTGCTGTTTAATGTCTAT
GTTGCGCAGCACAGCCGCATGGGTTACTGGTTTAATATTCCTTTGTTGTTACTCTCTTCATTGGCCGCAGGCCTTTATAT
GAGTTTTTGGGTGTAG

Upstream 100 bases:

>100_bases
TTATATTACCTTTCCGGTGGCTTTTCTCAAGCTGAAAAAGGTATGCTGCGGAATATATTCACAATCTTGTGGAGCCGGGT
TGCACAAATGGAGGTGAGCC

Downstream 100 bases:

>100_bases
TGCATTTTCGGCGCATACATCCGAGTGCTCACGCTCCACTGACTCAGTCCAATCGCGTTTTATTCCCGCAGGATGTTAAA
TGGCGCCACCGTCTTTCAGG

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 111; Mature: 110

Protein sequence:

>111_residues
MSKLRIFQLLLAGLSILGWALAIWALMLFHEARPDRAVGYFLSKGATVRLFWEPSLTLRLEQVIWIVCGVSLVSLLFNVY
VAQHSRMGYWFNIPLLLLSSLAAGLYMSFWV

Sequences:

>Translated_111_residues
MSKLRIFQLLLAGLSILGWALAIWALMLFHEARPDRAVGYFLSKGATVRLFWEPSLTLRLEQVIWIVCGVSLVSLLFNVY
VAQHSRMGYWFNIPLLLLSSLAAGLYMSFWV
>Mature_110_residues
SKLRIFQLLLAGLSILGWALAIWALMLFHEARPDRAVGYFLSKGATVRLFWEPSLTLRLEQVIWIVCGVSLVSLLFNVYV
AQHSRMGYWFNIPLLLLSSLAAGLYMSFWV

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 12677; Mature: 12546

Theoretical pI: Translated: 10.00; Mature: 10.00

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.9 %Cys     (Translated Protein)
3.6 %Met     (Translated Protein)
4.5 %Cys+Met (Translated Protein)
0.9 %Cys     (Mature Protein)
2.7 %Met     (Mature Protein)
3.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSKLRIFQLLLAGLSILGWALAIWALMLFHEARPDRAVGYFLSKGATVRLFWEPSLTLRL
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHCCCCEEEEEECCCHHHHH
EQVIWIVCGVSLVSLLFNVYVAQHSRMGYWFNIPLLLLSSLAAGLYMSFWV
HHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEECHHHHHHHHHHHHHHHHCC
>Mature Secondary Structure 
SKLRIFQLLLAGLSILGWALAIWALMLFHEARPDRAVGYFLSKGATVRLFWEPSLTLRL
CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHCCCCEEEEEECCCHHHHH
EQVIWIVCGVSLVSLLFNVYVAQHSRMGYWFNIPLLLLSSLAAGLYMSFWV
HHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEECHHHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA