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The map label for this gene is 119774727

Identifier: 119774727

GI number: 119774727

Start: 1937050

End: 1938060

Strand: Direct

Name: 119774727

Synonym: Sama_1590

Alternate gene names: NA

Gene position: 1937050-1938060 (Clockwise)

Preceding gene: 119774726

Following gene: 119774728

Centisome position: 44.98

GC content: 52.82

Gene sequence:

>1011_bases
ATGTTGCTGCGAGTCTTGTTGCCACTCTCTTTACTCTCCCTTGCCGCGATGTCTGCCCAGGCGGCAGATAGTCCGGGGCA
CCAGCTTCAACCCAATGCGATCAAGAGTCTGTTACTGGACGTTGTGAATGCGGGTGAATATTTGGTTGCTGTGGGTGAGC
GAGGCCATGTTCTGCTGGGTAACGGCAGTTGGCAACAGGTTGAAACACCGACGGATGCGCAGCTCACCAAGGTTTTTTTC
CTCAACAATCAGTTGGGATGGGCAGTAGGGCACGACGCCACTATTATTCATACCCAGGATGGCGGAAAGACCTGGAACAA
ACAATTCTCCGCCCCCGAGCGTGAACGCCCCTTTATGGATGTGTTGTTCGTGGATGACAAGCGCGGCTTCGCGGTAGGCG
CCTATGGTCTTTTCTTTACTACCTTTGATGGTGGTAAACAGTGGCAGGAGGTTTTTCATCAGGAGCTACTGTTTGAAGAA
GATCTGGCTTATTTGAACGAGCTTAAAGACACAGATCCCGAGGCCTATGCCATTGAACGGGCTTCTCTGCTGCCTCATTT
TAACCGTTTGCTGCGTCTCAACGATGGTCGCTTGCTGATGGTGGGAGAGCTGGGGTTGGTGGCTGTATCAGACAACAACG
GTGACAGCTTTACCCGCTTGCCATTTGATTATGAAGGCTCGATGTTCTCTGCCATTCAGCAGGGTGACAGTGTGTATGTG
ATGGGCCTCAGAGGCCATGTGTTTGAGGCCGGATTAGCCCTGGATGACTGGCAGCAACTCGATTTACCCGTCGAGTCCAG
TATCAATGGCGCCCTTGCAGATGATAAAGGCACTATTTACTTTGTGGGTAACGCCGGTGTCATACTCAGTAAACCGGATG
GTGAAGAGGTGTCTCTAGTGGCGCGCCGCCAGGGAGAAAACCTCGTTGCAGCGGCCAAAGACAGCCGCGGTAAAGTGTGG
CTTGTGGGGGCCAAGGGCGTATTTGCGCTCGAGGATGCCCAGAAACATTAA

Upstream 100 bases:

>100_bases
ACACCGGACGCACTGCGTCGTGAAGGCGTGCGTTAATTTTTATCAGCCAGTAAACCGGGGCGCATTCTGCGCCCCTAATT
TTCAGCATTAGGATGTTTTT

Downstream 100 bases:

>100_bases
TCAATGCGTCTATAACGATAACAACAGGACCTAAGTGATGTTGGAAAGACTGGTCAATGGGTTTGAAAGTTTTCTCTTTC
GCCATCGTGGTTGGGTAATC

Product: BNR repeat-containing protein

Products: NA

Alternate protein names: BNR Repeat-Containing Glycosyl Hydrolase; Glycosyl Hydrolase; BNR/Asp-Box Repeat-Containing Protein; BNR Domain-Containing Protein; Glycosyl Hydrolase BNR Repeat Protein; Glycosyl Hydrolase BNR Repeat; BNR/Asp-Box Repeat Protein; Plant Photosystem II Stability/Assembly Factor Protein; Glycosyl Hydrolase BNR Repeat-Containing Glycosyl Hydrolase; Protein Related Photosystem II Stability/Assembly Factor; Oxidoreductase; BNR Repeat Protein; BNR/Asp-Box Repeat Domain Protein

Number of amino acids: Translated: 336; Mature: 336

Protein sequence:

>336_residues
MLLRVLLPLSLLSLAAMSAQAADSPGHQLQPNAIKSLLLDVVNAGEYLVAVGERGHVLLGNGSWQQVETPTDAQLTKVFF
LNNQLGWAVGHDATIIHTQDGGKTWNKQFSAPERERPFMDVLFVDDKRGFAVGAYGLFFTTFDGGKQWQEVFHQELLFEE
DLAYLNELKDTDPEAYAIERASLLPHFNRLLRLNDGRLLMVGELGLVAVSDNNGDSFTRLPFDYEGSMFSAIQQGDSVYV
MGLRGHVFEAGLALDDWQQLDLPVESSINGALADDKGTIYFVGNAGVILSKPDGEEVSLVARRQGENLVAAAKDSRGKVW
LVGAKGVFALEDAQKH

Sequences:

>Translated_336_residues
MLLRVLLPLSLLSLAAMSAQAADSPGHQLQPNAIKSLLLDVVNAGEYLVAVGERGHVLLGNGSWQQVETPTDAQLTKVFF
LNNQLGWAVGHDATIIHTQDGGKTWNKQFSAPERERPFMDVLFVDDKRGFAVGAYGLFFTTFDGGKQWQEVFHQELLFEE
DLAYLNELKDTDPEAYAIERASLLPHFNRLLRLNDGRLLMVGELGLVAVSDNNGDSFTRLPFDYEGSMFSAIQQGDSVYV
MGLRGHVFEAGLALDDWQQLDLPVESSINGALADDKGTIYFVGNAGVILSKPDGEEVSLVARRQGENLVAAAKDSRGKVW
LVGAKGVFALEDAQKH
>Mature_336_residues
MLLRVLLPLSLLSLAAMSAQAADSPGHQLQPNAIKSLLLDVVNAGEYLVAVGERGHVLLGNGSWQQVETPTDAQLTKVFF
LNNQLGWAVGHDATIIHTQDGGKTWNKQFSAPERERPFMDVLFVDDKRGFAVGAYGLFFTTFDGGKQWQEVFHQELLFEE
DLAYLNELKDTDPEAYAIERASLLPHFNRLLRLNDGRLLMVGELGLVAVSDNNGDSFTRLPFDYEGSMFSAIQQGDSVYV
MGLRGHVFEAGLALDDWQQLDLPVESSINGALADDKGTIYFVGNAGVILSKPDGEEVSLVARRQGENLVAAAKDSRGKVW
LVGAKGVFALEDAQKH

Specific function: Unknown

COG id: COG4447

COG function: function code R; Uncharacterized protein related to plant photosystem II stability/assembly factor

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 36819; Mature: 36819

Theoretical pI: Translated: 4.54; Mature: 4.54

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
1.8 %Met     (Translated Protein)
1.8 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
1.8 %Met     (Mature Protein)
1.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLLRVLLPLSLLSLAAMSAQAADSPGHQLQPNAIKSLLLDVVNAGEYLVAVGERGHVLLG
CHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHCCCCEEEEECCCCEEEEE
NGSWQQVETPTDAQLTKVFFLNNQLGWAVGHDATIIHTQDGGKTWNKQFSAPERERPFMD
CCCCCCCCCCCCCEEEEEEEECCCCCEEECCCEEEEEECCCCCCCCCCCCCCCCCCCEEE
VLFVDDKRGFAVGAYGLFFTTFDGGKQWQEVFHQELLFEEDLAYLNELKDTDPEAYAIER
EEEEECCCCEEEEEEEEEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEHHH
ASLLPHFNRLLRLNDGRLLMVGELGLVAVSDNNGDSFTRLPFDYEGSMFSAIQQGDSVYV
HHHCHHHHHHEEECCCCEEEEECCEEEEEECCCCCCEEECCCCCCCHHHHHHHCCCCEEE
MGLRGHVFEAGLALDDWQQLDLPVESSINGALADDKGTIYFVGNAGVILSKPDGEEVSLV
EEECCCEEECCCCCCCHHHCCCCHHCCCCCCEECCCCEEEEEECCCEEEECCCCCCEEEE
ARRQGENLVAAAKDSRGKVWLVGAKGVFALEDAQKH
EECCCCCEEEEECCCCCCEEEEECCCEEEECCCCCC
>Mature Secondary Structure
MLLRVLLPLSLLSLAAMSAQAADSPGHQLQPNAIKSLLLDVVNAGEYLVAVGERGHVLLG
CHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHCCCCEEEEECCCCEEEEE
NGSWQQVETPTDAQLTKVFFLNNQLGWAVGHDATIIHTQDGGKTWNKQFSAPERERPFMD
CCCCCCCCCCCCCEEEEEEEECCCCCEEECCCEEEEEECCCCCCCCCCCCCCCCCCCEEE
VLFVDDKRGFAVGAYGLFFTTFDGGKQWQEVFHQELLFEEDLAYLNELKDTDPEAYAIER
EEEEECCCCEEEEEEEEEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEHHH
ASLLPHFNRLLRLNDGRLLMVGELGLVAVSDNNGDSFTRLPFDYEGSMFSAIQQGDSVYV
HHHCHHHHHHEEECCCCEEEEECCEEEEEECCCCCCEEECCCCCCCHHHHHHHCCCCEEE
MGLRGHVFEAGLALDDWQQLDLPVESSINGALADDKGTIYFVGNAGVILSKPDGEEVSLV
EEECCCEEECCCCCCCHHHCCCCHHCCCCCCEECCCCEEEEEECCCEEEECCCCCCEEEE
ARRQGENLVAAAKDSRGKVWLVGAKGVFALEDAQKH
EECCCCCEEEEECCCCCCEEEEECCCEEEECCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA