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The map label for this gene is yccF [H]

Identifier: 119774712

GI number: 119774712

Start: 1918452

End: 1918859

Strand: Reverse

Name: yccF [H]

Synonym: Sama_1575

Alternate gene names: 119774712

Gene position: 1918859-1918452 (Counterclockwise)

Preceding gene: 119774714

Following gene: 119774710

Centisome position: 44.56

GC content: 53.19

Gene sequence:

>408_bases
ATGGCCCTGCTCAGGCTTATATTTAATATCGCGTGGTTTGTACTTGGTGGCTTTGTCATGGGGCTGGCCTGGTGGCTTGC
TGGTGTGCTGTGCTTTATCAGTATTATCGGCATTCCCTTCGGACGAGCCTGTTTCGTAATTGGTGAAATGGCGTTTTGGC
CCTTTGGACAGGACCATGTCTCCCGCCGCGAGCTTACCGGCCTGGAAGATTTGGGGACAGGCCCCCTTGGCATGGTGGGC
AACGTTATATGGTTTTTGCTGTTTGGGATCTGGCTTGCCATTGGTCACATTGGCCACGCACTGGCCTGCTTTATCACCAT
TATCGGCATTCCATTCGGCATACAGCACCTTAAATTGGCTCTGCTCAGCCTGACCCCGATTGGACGCACAGTCGTTACTC
GTGCGTGA

Upstream 100 bases:

>100_bases
ACATCAATATGTCATTGATATTCAAAAAAATAAATAGATGGCCTTGATTTTGCTTAGTTTTTACCAATCGAAGATGGACG
CATCGTTTACAGGAGAACAT

Downstream 100 bases:

>100_bases
AGAGTTTCTTACTCCGGCAAGTGATCTGCCATGATTTCTGCCGCATCAATTCGCTGCAGGCCTTCATTGAAAATGGCCTG
CCAGCGATGACCTTCCGGCG

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 135; Mature: 134

Protein sequence:

>135_residues
MALLRLIFNIAWFVLGGFVMGLAWWLAGVLCFISIIGIPFGRACFVIGEMAFWPFGQDHVSRRELTGLEDLGTGPLGMVG
NVIWFLLFGIWLAIGHIGHALACFITIIGIPFGIQHLKLALLSLTPIGRTVVTRA

Sequences:

>Translated_135_residues
MALLRLIFNIAWFVLGGFVMGLAWWLAGVLCFISIIGIPFGRACFVIGEMAFWPFGQDHVSRRELTGLEDLGTGPLGMVG
NVIWFLLFGIWLAIGHIGHALACFITIIGIPFGIQHLKLALLSLTPIGRTVVTRA
>Mature_134_residues
ALLRLIFNIAWFVLGGFVMGLAWWLAGVLCFISIIGIPFGRACFVIGEMAFWPFGQDHVSRRELTGLEDLGTGPLGMVGN
VIWFLLFGIWLAIGHIGHALACFITIIGIPFGIQHLKLALLSLTPIGRTVVTRA

Specific function: Unknown

COG id: COG3304

COG function: function code S; Predicted membrane protein

Gene ontology:

Cell location: Cell inner membrane; Multi-pass membrane protein [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

Organism=Escherichia coli, GI1787195, Length=133, Percent_Identity=39.0977443609023, Blast_Score=89, Evalue=1e-19,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR005185 [H]

Pfam domain/function: PF03733 DUF307 [H]

EC number: NA

Molecular weight: Translated: 14750; Mature: 14619

Theoretical pI: Translated: 8.54; Mature: 8.54

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.2 %Cys     (Translated Protein)
3.0 %Met     (Translated Protein)
5.2 %Cys+Met (Translated Protein)
2.2 %Cys     (Mature Protein)
2.2 %Met     (Mature Protein)
4.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MALLRLIFNIAWFVLGGFVMGLAWWLAGVLCFISIIGIPFGRACFVIGEMAFWPFGQDHV
CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHCCCCHHHH
SRRELTGLEDLGTGPLGMVGNVIWFLLFGIWLAIGHIGHALACFITIIGIPFGIQHLKLA
HHHHHCCHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHH
LLSLTPIGRTVVTRA
HHHHCCCCHHHHCCC
>Mature Secondary Structure 
ALLRLIFNIAWFVLGGFVMGLAWWLAGVLCFISIIGIPFGRACFVIGEMAFWPFGQDHV
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHCCCCHHHH
SRRELTGLEDLGTGPLGMVGNVIWFLLFGIWLAIGHIGHALACFITIIGIPFGIQHLKLA
HHHHHCCHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHH
LLSLTPIGRTVVTRA
HHHHCCCCHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 8905232; 9278503; 2542273; 7984428 [H]