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The map label for this gene is 119774600

Identifier: 119774600

GI number: 119774600

Start: 1772306

End: 1773613

Strand: Reverse

Name: 119774600

Synonym: Sama_1463

Alternate gene names: NA

Gene position: 1773613-1772306 (Counterclockwise)

Preceding gene: 119774601

Following gene: 119774599

Centisome position: 41.19

GC content: 55.35

Gene sequence:

>1308_bases
ATGGCCACGAAATCATTATGGCTCGTGGCCTGTATGCTGACCCCGGCGGTGACAATACCTGTCACGGCCCTGGCTCAGCA
GCAGGTATCAGACGAGCGCGATCACGAACCGAATCAGCAAAGTGATGTTAACCCCATAGAAACCCCGGACACGGATAGGG
CTGCTTTTTGGGAGGACACCAGCCTTATTCTCAAGCCCCGAACCTATTATCTCGACCGAGACAGGGACACCAAGGCAGAC
AGCGTTGGCTGGGCATTGGGGGGCGCATTGGAGTACAAATCAGGCTGGCTTGGTGACTGGCTCAGAGTCAATGCCACCCT
GTACACCTCACAAAAGCTCTATGGGCCCGACGACAAAGACGGCACGGGTCTTTTCAAGCCGGGACAGGAGAGTTTTACCG
TGCTCGGCGAAGCCAACCTGACAGTGCGTTTTGCAGAAAATCACGGTATGCGCATAGGCCGTCAGCGCTTCGAACTGCCC
TATCTTGGCAGCCATGATATCCGCATGGTGCCCAACACCTTTGAGGGGATTGCCATCGGCAACACCTCCAAAAGTGGCTT
TGGCTACATGGCAGGCTACGTGGACAAGATAAAGGGCAAAAGCGACGATGACTTTATCTCCATGTCAGAGGCCGCCGGCG
CTGAAGGCAGCGATGAGGGCACAGGTTTCGCCGGTGCCAGATACATAGCAGCTGGCGGCACCACTGTGGGCGCCATATAT
CAGCGCACCTTTGAGACCTTTGATACCTTTTTTGCCAAGGTTGAACACCCATTCGAAATTGTCAAAGGCAGCACCATCAG
TGCCAACCTGCAGTACACAGCCCAGCAAAGCAGTGGTGATGAACTGATTGGCGAATTCGACACCCAAATGCTGGCAGCCA
AGGTTGAACTGAAACACGGCCCATTCAGCTGGCGCTTCGGTGCCAGCACCACGGACGACGACCACGGCATCATCAAGCCC
TTTGGCAACCCGGCCAACTACCTGTCAGTGATTGTGGATGACTTCGACCGCGCCGGTGAAGATGCCTATATGTTGGGCTT
TTCGCTGGACTTGGGCCGGGTGGGCCCGGGGGACATGAGCCTTTTCACCAATATCGTCCACGGCGATACCCCTGAGACGG
GCCCGGCCGCCAGTGCCGATGAAACCGAATACGACCTGACACTGGACTGGCGACTCAAAGAGAGTTGGAGTGACCGCATT
TGGCTGAGAATGCGTGCAGCCTATGTGGATCAGGACAACGACTTTGCCGGCGCAGACGATTTCCTCGATTTCAGAATCAT
CGTTAATTACGACTTCAATCTATTGTGA

Upstream 100 bases:

>100_bases
GTTTCGCCATATCGCCCTGGGGGAAAACTACTTCCGGTTAATGAACCTCGATTACCACGCCCCTCAAGTCTGTAAGAAGA
CCGGCAACTAAGGACGGACT

Downstream 100 bases:

>100_bases
TCCCACGAACGACAAGGAAAGCCACATGAAACCATCTTTAACAGGCATTCTGGTGACCGCAGCGCTGCTCGCTCCCGGGA
TGTCATTGGCAGAAATCAGC

Product: hypothetical protein

Products: NA

Alternate protein names: OprD Family Outer Membrane Porin; Outer Membrane Porin OprD Family; PhaK-Like Protein; Outer Membrane Porin OprE; Phenylacetic Acid-Specific Porin; Benzoate-Specific Porin; Porin D; Benzoate-Specific Outer Membrane Porin

Number of amino acids: Translated: 435; Mature: 434

Protein sequence:

>435_residues
MATKSLWLVACMLTPAVTIPVTALAQQQVSDERDHEPNQQSDVNPIETPDTDRAAFWEDTSLILKPRTYYLDRDRDTKAD
SVGWALGGALEYKSGWLGDWLRVNATLYTSQKLYGPDDKDGTGLFKPGQESFTVLGEANLTVRFAENHGMRIGRQRFELP
YLGSHDIRMVPNTFEGIAIGNTSKSGFGYMAGYVDKIKGKSDDDFISMSEAAGAEGSDEGTGFAGARYIAAGGTTVGAIY
QRTFETFDTFFAKVEHPFEIVKGSTISANLQYTAQQSSGDELIGEFDTQMLAAKVELKHGPFSWRFGASTTDDDHGIIKP
FGNPANYLSVIVDDFDRAGEDAYMLGFSLDLGRVGPGDMSLFTNIVHGDTPETGPAASADETEYDLTLDWRLKESWSDRI
WLRMRAAYVDQDNDFAGADDFLDFRIIVNYDFNLL

Sequences:

>Translated_435_residues
MATKSLWLVACMLTPAVTIPVTALAQQQVSDERDHEPNQQSDVNPIETPDTDRAAFWEDTSLILKPRTYYLDRDRDTKAD
SVGWALGGALEYKSGWLGDWLRVNATLYTSQKLYGPDDKDGTGLFKPGQESFTVLGEANLTVRFAENHGMRIGRQRFELP
YLGSHDIRMVPNTFEGIAIGNTSKSGFGYMAGYVDKIKGKSDDDFISMSEAAGAEGSDEGTGFAGARYIAAGGTTVGAIY
QRTFETFDTFFAKVEHPFEIVKGSTISANLQYTAQQSSGDELIGEFDTQMLAAKVELKHGPFSWRFGASTTDDDHGIIKP
FGNPANYLSVIVDDFDRAGEDAYMLGFSLDLGRVGPGDMSLFTNIVHGDTPETGPAASADETEYDLTLDWRLKESWSDRI
WLRMRAAYVDQDNDFAGADDFLDFRIIVNYDFNLL
>Mature_434_residues
ATKSLWLVACMLTPAVTIPVTALAQQQVSDERDHEPNQQSDVNPIETPDTDRAAFWEDTSLILKPRTYYLDRDRDTKADS
VGWALGGALEYKSGWLGDWLRVNATLYTSQKLYGPDDKDGTGLFKPGQESFTVLGEANLTVRFAENHGMRIGRQRFELPY
LGSHDIRMVPNTFEGIAIGNTSKSGFGYMAGYVDKIKGKSDDDFISMSEAAGAEGSDEGTGFAGARYIAAGGTTVGAIYQ
RTFETFDTFFAKVEHPFEIVKGSTISANLQYTAQQSSGDELIGEFDTQMLAAKVELKHGPFSWRFGASTTDDDHGIIKPF
GNPANYLSVIVDDFDRAGEDAYMLGFSLDLGRVGPGDMSLFTNIVHGDTPETGPAASADETEYDLTLDWRLKESWSDRIW
LRMRAAYVDQDNDFAGADDFLDFRIIVNYDFNLL

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 48084; Mature: 47952

Theoretical pI: Translated: 4.27; Mature: 4.27

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.2 %Cys     (Translated Protein)
2.3 %Met     (Translated Protein)
2.5 %Cys+Met (Translated Protein)
0.2 %Cys     (Mature Protein)
2.1 %Met     (Mature Protein)
2.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MATKSLWLVACMLTPAVTIPVTALAQQQVSDERDHEPNQQSDVNPIETPDTDRAAFWEDT
CCCCHHHHHHHHHCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCEEECCC
SLILKPRTYYLDRDRDTKADSVGWALGGALEYKSGWLGDWLRVNATLYTSQKLYGPDDKD
EEEEECCEEEECCCCCCCCCCCCEECCCEEEECCCCCCCEEEEEEEEEECCEECCCCCCC
GTGLFKPGQESFTVLGEANLTVRFAENHGMRIGRQRFELPYLGSHDIRMVPNTFEGIAIG
CCCCCCCCCCCEEEEECCCEEEEECCCCCCEECHHHCCCCCCCCCCEEECCCCCCCEEEC
NTSKSGFGYMAGYVDKIKGKSDDDFISMSEAAGAEGSDEGTGFAGARYIAAGGTTVGAIY
CCCCCCCCHHHHHHHHHCCCCCCCEEEEHHHCCCCCCCCCCCCCCEEEEEECCCHHHHHH
QRTFETFDTFFAKVEHPFEIVKGSTISANLQYTAQQSSGDELIGEFDTQMLAAKVELKHG
HHHHHHHHHHHHHHCCCHHHHCCCEEEEEEEEEECCCCCCHHHHHHHHHEEEEEEEECCC
PFSWRFGASTTDDDHGIIKPFGNPANYLSVIVDDFDRAGEDAYMLGFSLDLGRVGPGDMS
CEEEEECCCCCCCCCCEEECCCCCHHHHHHHHHHHHCCCCCEEEEEEEEECCCCCCCCHH
LFTNIVHGDTPETGPAASADETEYDLTLDWRLKESWSDRIWLRMRAAYVDQDNDFAGADD
HHHHHHCCCCCCCCCCCCCCCCCEEEEEEEEECCCCCCEEEEEEEEEEECCCCCCCCCCC
FLDFRIIVNYDFNLL
CEEEEEEEECCCCCC
>Mature Secondary Structure 
ATKSLWLVACMLTPAVTIPVTALAQQQVSDERDHEPNQQSDVNPIETPDTDRAAFWEDT
CCCHHHHHHHHHCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCEEECCC
SLILKPRTYYLDRDRDTKADSVGWALGGALEYKSGWLGDWLRVNATLYTSQKLYGPDDKD
EEEEECCEEEECCCCCCCCCCCCEECCCEEEECCCCCCCEEEEEEEEEECCEECCCCCCC
GTGLFKPGQESFTVLGEANLTVRFAENHGMRIGRQRFELPYLGSHDIRMVPNTFEGIAIG
CCCCCCCCCCCEEEEECCCEEEEECCCCCCEECHHHCCCCCCCCCCEEECCCCCCCEEEC
NTSKSGFGYMAGYVDKIKGKSDDDFISMSEAAGAEGSDEGTGFAGARYIAAGGTTVGAIY
CCCCCCCCHHHHHHHHHCCCCCCCEEEEHHHCCCCCCCCCCCCCCEEEEEECCCHHHHHH
QRTFETFDTFFAKVEHPFEIVKGSTISANLQYTAQQSSGDELIGEFDTQMLAAKVELKHG
HHHHHHHHHHHHHHCCCHHHHCCCEEEEEEEEEECCCCCCHHHHHHHHHEEEEEEEECCC
PFSWRFGASTTDDDHGIIKPFGNPANYLSVIVDDFDRAGEDAYMLGFSLDLGRVGPGDMS
CEEEEECCCCCCCCCCEEECCCCCHHHHHHHHHHHHCCCCCEEEEEEEEECCCCCCCCHH
LFTNIVHGDTPETGPAASADETEYDLTLDWRLKESWSDRIWLRMRAAYVDQDNDFAGADD
HHHHHHCCCCCCCCCCCCCCCCCEEEEEEEEECCCCCCEEEEEEEEEEECCCCCCCCCCC
FLDFRIIVNYDFNLL
CEEEEEEEECCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA