Definition Shewanella amazonensis SB2B chromosome, complete genome.
Accession NC_008700
Length 4,306,142

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The map label for this gene is 119774551

Identifier: 119774551

GI number: 119774551

Start: 1716490

End: 1716903

Strand: Reverse

Name: 119774551

Synonym: Sama_1414

Alternate gene names: NA

Gene position: 1716903-1716490 (Counterclockwise)

Preceding gene: 119774552

Following gene: 119774550

Centisome position: 39.87

GC content: 55.31

Gene sequence:

>414_bases
ATGAAAACCACAGTACAAACCCTGATTGACGCCCCTATTGCCATTGTGTGGCAAGCCTGGACAACCCCCAGCCATATTTG
CCAATGGAATTTTGCGGCCGACAGCTGGTGCTGCCCCGCAGCAGAAATCGATCTGCGTGAAGGGGGCACATTCAGTTATC
GGATGCAGGCCCGTGACGGCTCCATGGGCTTTGATTTTAGCGGCACCTTCACCAATCTTATCCCCGGCAGCGCCCTGACG
TTTGTGATGGAAGATGGTCGCGAAGTACAGGTGATCCTGCGTCAAACCAAGGAAGGCGTGCTGCTGGAGGAAACCTTCGA
CAATGAGGACCAACATACCGCTGAGCAGCAGCGCCAGGGCTGGCAGGCTATCCTGGACAACTTTAAGCAACACGTAGAGT
CCCTTCGCAGCTGA

Upstream 100 bases:

>100_bases
ATTGCCACGCTTTATGAGGGGCTTAAGTCCGCTTAAGCTGATTGCGGCAGCGCCTTGATGCCCTGCCGCTCATCCCGCCG
AGTACAAGGAACTGAGTACC

Downstream 100 bases:

>100_bases
TAAGGGCCGCAGATAAGGCGTCAACAAGGAGGCAAACATGAACAGGCAAGGTGGTTGCCACTGCGGCAACATTCGTTATC
AGCTCAGCGCAGAGCCCTTT

Product: hypothetical protein

Products: NA

Alternate protein names: Protein Containing DUF; Hsp90 ATPase Activator Family Protein

Number of amino acids: Translated: 137; Mature: 137

Protein sequence:

>137_residues
MKTTVQTLIDAPIAIVWQAWTTPSHICQWNFAADSWCCPAAEIDLREGGTFSYRMQARDGSMGFDFSGTFTNLIPGSALT
FVMEDGREVQVILRQTKEGVLLEETFDNEDQHTAEQQRQGWQAILDNFKQHVESLRS

Sequences:

>Translated_137_residues
MKTTVQTLIDAPIAIVWQAWTTPSHICQWNFAADSWCCPAAEIDLREGGTFSYRMQARDGSMGFDFSGTFTNLIPGSALT
FVMEDGREVQVILRQTKEGVLLEETFDNEDQHTAEQQRQGWQAILDNFKQHVESLRS
>Mature_137_residues
MKTTVQTLIDAPIAIVWQAWTTPSHICQWNFAADSWCCPAAEIDLREGGTFSYRMQARDGSMGFDFSGTFTNLIPGSALT
FVMEDGREVQVILRQTKEGVLLEETFDNEDQHTAEQQRQGWQAILDNFKQHVESLRS

Specific function: Unknown

COG id: COG3832

COG function: function code S; Uncharacterized conserved protein

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 15546; Mature: 15546

Theoretical pI: Translated: 4.36; Mature: 4.36

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.2 %Cys     (Translated Protein)
2.9 %Met     (Translated Protein)
5.1 %Cys+Met (Translated Protein)
2.2 %Cys     (Mature Protein)
2.9 %Met     (Mature Protein)
5.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKTTVQTLIDAPIAIVWQAWTTPSHICQWNFAADSWCCPAAEIDLREGGTFSYRMQARDG
CCCHHHHHHCCCCEEEEECCCCCCCEEEECCCCCCCCCCCCCEECCCCCEEEEEEEECCC
SMGFDFSGTFTNLIPGSALTFVMEDGREVQVILRQTKEGVLLEETFDNEDQHTAEQQRQG
CCCCCCCCCHHHCCCCCEEEEEECCCCHHHHHHHHCCCCEEEEECCCCCHHHHHHHHHHH
WQAILDNFKQHVESLRS
HHHHHHHHHHHHHHHCC
>Mature Secondary Structure
MKTTVQTLIDAPIAIVWQAWTTPSHICQWNFAADSWCCPAAEIDLREGGTFSYRMQARDG
CCCHHHHHHCCCCEEEEECCCCCCCEEEECCCCCCCCCCCCCEECCCCCEEEEEEEECCC
SMGFDFSGTFTNLIPGSALTFVMEDGREVQVILRQTKEGVLLEETFDNEDQHTAEQQRQG
CCCCCCCCCHHHCCCCCEEEEEECCCCHHHHHHHHCCCCEEEEECCCCCHHHHHHHHHHH
WQAILDNFKQHVESLRS
HHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA