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The map label for this gene is rhtA [H]

Identifier: 119774531

GI number: 119774531

Start: 1685437

End: 1687578

Strand: Reverse

Name: rhtA [H]

Synonym: Sama_1394

Alternate gene names: 119774531

Gene position: 1687578-1685437 (Counterclockwise)

Preceding gene: 119774535

Following gene: 119774530

Centisome position: 39.19

GC content: 55.14

Gene sequence:

>2142_bases
ATGAAGTTATCCCCAGTTGCCATTGCGCTCTCTCCCTTGATGGCCCTCACCGCTGCACCTGCCTTTGCCGAGGTGAAAGA
TACCACCTCCCCTGACACTATCGCCATTGAACGCATGATAGTCACCGGCAGCCGGGTACCTGAACGCCTTGACGAGGTGC
CTTCCTCTGTCACCCTCATTGACAGCAAGACCCTCGCTACAGAGATGAGCATCAGCTCTGAATTGCAAAACATGCTGGCA
ACCCGCGTTCCTGGCATGTCGCCCGCCACCGGTACCTCCAGCAACGCCGGCCAAACCCTTCGCGGCCGTAAAGCGCTGAT
TTTGATTGACGGAGTGCCTCAATCCACGCCCCTGCGAAACGGCTCGCTGGACATTCGCTCCATCGACATGAACGCCATTG
AGCGGGTGGAAGTCATCAAGGGAGCGACCTCCATCTATGGCAATGGCGCGGCCGGCGGCATTATCAACTACATCACCAAA
AAACCGGGGGCCGATGGCGCTATTGGTGGCGTCCTGGGCGTGTCCAGCCGTTTCAGTGCGGTAAAATTTGAAGACAGTGT
TGGCAGCCGGGTTGAAGGCGCGCTCAATGGCAGTGTGGGACAGCTGGGCTATCTCATCAGCGCCAGCCGTGATGACTATG
GTCTGCAGCGGGATGCCGAAGGCGATGTCCCTGGCCTGGTGTACGGGCTGTCAGAAACCACCACGGACAACCTCTTTACC
AAATTCCATTTCAATTTCGACGATGAAAAATCGCTGCAATTAACGTACAACTACTTCAGCTCTGCACAGGACGCCCGCAT
GGTGGATGTCACCGGCAGCGTCAACAGTGGTCAGAAAACCTACGCCATAGAAGCCGGTCCCGACACTCTCATCCTCGGGG
AGCCACAGGGAGTCGATGGAAACCATAATCTGATGGTGAAGTACGAGGACCTGGCGCTGTTCGACAATACCCGCCTCGCC
ATAGATGCCTATGGTCAGAAAATCGAAAACGTCTTCTTTTACAGCCTGACACTTGCCAATCCCGAGCAGGGACTTGATGG
CGGTCAGTCCATCATTCGCTCTGAAAAACGTGGTGTTCGCGCCAACTTCAACTCGGATTTCACCCTGGGCGATACCGAGC
TGGATTTACTCTATGGCATTGACTATCTGCAGGATGTATCCAGCCAGCCCTTGGTGGATGGCCGTATGTGGGTGCCCGAG
ATGGACATGCAGAATCTCGCCTTCTATCTGCAGGCCAAATGGCTGTTTGCCGAAGATTGGGTGCTCAAGGCCGGTGTACG
CCGGGATCAGATGGCCATTGAAGTGGACGACTACCAGACCCTGCGCCTGTGCCGTACAGCAACCCAGTGCTCTACCCCCG
TTGCGGTAAAAGGCGGTGAGCTTGAGTTTGATGCCAACACCTACAATATCGGGCTCAGATATAAAGGCTCGACCGTTTTC
AGTCCTTTTATCAGTTTTTCACAGGGTGCGGATATATCGGATCTGGGCTTGCTGCTGCGTACCGCTACGGTGGACGACCT
GGCAAAAATTCAGTCACAGGCGGCACTCATTGATAATTACGAAGCCGGTTTCGACGGCCATTGGGAGGCATTCAGCTACT
CAGCAGCGGTTTTCCTGAGCAAGTCAGAGCTTGGCACCCGTACCGTGCTGAATCCCGCCAGCGGCATTTATGAACCTGTG
CGTGCGCCTCAGGAAATCAAAGGGATAGAGCTTGCGGCCAGCTATGACGTGAATGATGAGCTGACCCTCGGCGCGAATTA
CAGCTGGATGGAAGGTAAGGATACTGATCAGGATATTTATCTGGATGGCCAGGCCATCACCCCACCCAAGTTTGCCGCCT
ATCTTGACTGGGCCACCACTGATAACAGCAGTGTGTCGCTGACCTGGCTGCATGTGGGCGATCGCAAACGCTTCGAGCCG
GTCAATGGTCAGTACAGCGGCAGCCAGGGACCGGTGGAAAGCTATTCGCTACTCAATCTGGCCGGTAATTATCGTGTCGA
TCAACTGCTCTTTACCCTCGGGGTAGAAAACCTGCTGAACGAAGACTACTACTCGGCCCGTTCTCAGGCCTTTACCTTCC
CCGGATATAACACCAAGGGGCTGGGTACCACGGTGAATATGGGGCTGAAGTGGTCCTTCTAA

Upstream 100 bases:

>100_bases
CCGCAAGTTAACAAAATTAATACATATGTAAATAATCTGAATTCACCATTGAGAGTAATTATCATTATCAAAACTAAAGT
ATGACCAAGGACTGAAAATA

Downstream 100 bases:

>100_bases
GCCCAGTCTGAGTCTTTGTCCACATCTTCGCTTGACTGAAAAAAGCAGCCGCCGGGCTGCTTTTTTATTTGCGTGTTGGC
AGCAGGGTTTCTACCATGTG

Product: TonB-dependent receptor, plug

Products: NA

Alternate protein names: TonB-dependent siderophore receptor rhtA [H]

Number of amino acids: Translated: 713; Mature: 713

Protein sequence:

>713_residues
MKLSPVAIALSPLMALTAAPAFAEVKDTTSPDTIAIERMIVTGSRVPERLDEVPSSVTLIDSKTLATEMSISSELQNMLA
TRVPGMSPATGTSSNAGQTLRGRKALILIDGVPQSTPLRNGSLDIRSIDMNAIERVEVIKGATSIYGNGAAGGIINYITK
KPGADGAIGGVLGVSSRFSAVKFEDSVGSRVEGALNGSVGQLGYLISASRDDYGLQRDAEGDVPGLVYGLSETTTDNLFT
KFHFNFDDEKSLQLTYNYFSSAQDARMVDVTGSVNSGQKTYAIEAGPDTLILGEPQGVDGNHNLMVKYEDLALFDNTRLA
IDAYGQKIENVFFYSLTLANPEQGLDGGQSIIRSEKRGVRANFNSDFTLGDTELDLLYGIDYLQDVSSQPLVDGRMWVPE
MDMQNLAFYLQAKWLFAEDWVLKAGVRRDQMAIEVDDYQTLRLCRTATQCSTPVAVKGGELEFDANTYNIGLRYKGSTVF
SPFISFSQGADISDLGLLLRTATVDDLAKIQSQAALIDNYEAGFDGHWEAFSYSAAVFLSKSELGTRTVLNPASGIYEPV
RAPQEIKGIELAASYDVNDELTLGANYSWMEGKDTDQDIYLDGQAITPPKFAAYLDWATTDNSSVSLTWLHVGDRKRFEP
VNGQYSGSQGPVESYSLLNLAGNYRVDQLLFTLGVENLLNEDYYSARSQAFTFPGYNTKGLGTTVNMGLKWSF

Sequences:

>Translated_713_residues
MKLSPVAIALSPLMALTAAPAFAEVKDTTSPDTIAIERMIVTGSRVPERLDEVPSSVTLIDSKTLATEMSISSELQNMLA
TRVPGMSPATGTSSNAGQTLRGRKALILIDGVPQSTPLRNGSLDIRSIDMNAIERVEVIKGATSIYGNGAAGGIINYITK
KPGADGAIGGVLGVSSRFSAVKFEDSVGSRVEGALNGSVGQLGYLISASRDDYGLQRDAEGDVPGLVYGLSETTTDNLFT
KFHFNFDDEKSLQLTYNYFSSAQDARMVDVTGSVNSGQKTYAIEAGPDTLILGEPQGVDGNHNLMVKYEDLALFDNTRLA
IDAYGQKIENVFFYSLTLANPEQGLDGGQSIIRSEKRGVRANFNSDFTLGDTELDLLYGIDYLQDVSSQPLVDGRMWVPE
MDMQNLAFYLQAKWLFAEDWVLKAGVRRDQMAIEVDDYQTLRLCRTATQCSTPVAVKGGELEFDANTYNIGLRYKGSTVF
SPFISFSQGADISDLGLLLRTATVDDLAKIQSQAALIDNYEAGFDGHWEAFSYSAAVFLSKSELGTRTVLNPASGIYEPV
RAPQEIKGIELAASYDVNDELTLGANYSWMEGKDTDQDIYLDGQAITPPKFAAYLDWATTDNSSVSLTWLHVGDRKRFEP
VNGQYSGSQGPVESYSLLNLAGNYRVDQLLFTLGVENLLNEDYYSARSQAFTFPGYNTKGLGTTVNMGLKWSF
>Mature_713_residues
MKLSPVAIALSPLMALTAAPAFAEVKDTTSPDTIAIERMIVTGSRVPERLDEVPSSVTLIDSKTLATEMSISSELQNMLA
TRVPGMSPATGTSSNAGQTLRGRKALILIDGVPQSTPLRNGSLDIRSIDMNAIERVEVIKGATSIYGNGAAGGIINYITK
KPGADGAIGGVLGVSSRFSAVKFEDSVGSRVEGALNGSVGQLGYLISASRDDYGLQRDAEGDVPGLVYGLSETTTDNLFT
KFHFNFDDEKSLQLTYNYFSSAQDARMVDVTGSVNSGQKTYAIEAGPDTLILGEPQGVDGNHNLMVKYEDLALFDNTRLA
IDAYGQKIENVFFYSLTLANPEQGLDGGQSIIRSEKRGVRANFNSDFTLGDTELDLLYGIDYLQDVSSQPLVDGRMWVPE
MDMQNLAFYLQAKWLFAEDWVLKAGVRRDQMAIEVDDYQTLRLCRTATQCSTPVAVKGGELEFDANTYNIGLRYKGSTVF
SPFISFSQGADISDLGLLLRTATVDDLAKIQSQAALIDNYEAGFDGHWEAFSYSAAVFLSKSELGTRTVLNPASGIYEPV
RAPQEIKGIELAASYDVNDELTLGANYSWMEGKDTDQDIYLDGQAITPPKFAAYLDWATTDNSSVSLTWLHVGDRKRFEP
VNGQYSGSQGPVESYSLLNLAGNYRVDQLLFTLGVENLLNEDYYSARSQAFTFPGYNTKGLGTTVNMGLKWSF

Specific function: Receptor for the siderophore rhizobactin [H]

COG id: COG1629

COG function: function code P; Outer membrane receptor proteins, mostly Fe transport

Gene ontology:

Cell location: Cell outer membrane [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the tonB-dependent receptor family [H]

Homologues:

Organism=Escherichia coli, GI1788478, Length=170, Percent_Identity=30.5882352941176, Blast_Score=70, Evalue=4e-13,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR012910
- InterPro:   IPR000531
- InterPro:   IPR010105 [H]

Pfam domain/function: PF07715 Plug; PF00593 TonB_dep_Rec [H]

EC number: NA

Molecular weight: Translated: 77506; Mature: 77506

Theoretical pI: Translated: 4.31; Mature: 4.31

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.3 %Cys     (Translated Protein)
2.1 %Met     (Translated Protein)
2.4 %Cys+Met (Translated Protein)
0.3 %Cys     (Mature Protein)
2.1 %Met     (Mature Protein)
2.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKLSPVAIALSPLMALTAAPAFAEVKDTTSPDTIAIERMIVTGSRVPERLDEVPSSVTLI
CCCCCHHHHHHHHHHHHCCCCHHHHCCCCCCCEEEEEEEEECCCCCHHHHHHCCCCEEEE
DSKTLATEMSISSELQNMLATRVPGMSPATGTSSNAGQTLRGRKALILIDGVPQSTPLRN
ECCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCEECCCEEEEEEECCCCCCCCCC
GSLDIRSIDMNAIERVEVIKGATSIYGNGAAGGIINYITKKPGADGAIGGVLGVSSRFSA
CCEEEEEECHHHHHHHHHHHCCHHCCCCCCCCCHHHHHHCCCCCCCCCHHHHCCCCCCEE
VKFEDSVGSRVEGALNGSVGQLGYLISASRDDYGLQRDAEGDVPGLVYGLSETTTDNLFT
EEECCCCCCCCCHHCCCCCCCEEEEEECCCCCCCCCCCCCCCCCEEEEECCCCCCCCEEE
KFHFNFDDEKSLQLTYNYFSSAQDARMVDVTGSVNSGQKTYAIEAGPDTLILGEPQGVDG
EEEECCCCCCCEEEEEEECCCCCCCEEEEEECCCCCCCEEEEEECCCCEEEEECCCCCCC
NHNLMVKYEDLALFDNTRLAIDAYGQKIENVFFYSLTLANPEQGLDGGQSIIRSEKRGVR
CCEEEEEEECEEEECCCEEEEEHHHHHHCEEEEEEEEECCCCCCCCHHHHHHHHHHCCCE
ANFNSDFTLGDTELDLLYGIDYLQDVSSQPLVDGRMWVPEMDMQNLAFYLQAKWLFAEDW
ECCCCCEEECCCCEEHHCCCHHHHCCCCCCCCCCEECCCCCCHHHEEEEEEEEEEEECCH
VLKAGVRRDQMAIEVDDYQTLRLCRTATQCSTPVAVKGGELEFDANTYNIGLRYKGSTVF
HHHCCCCCCCEEEEECCCHHHHHHHHHHHCCCCEEEECCEEEECCCEEEEEEEECCCCHH
SPFISFSQGADISDLGLLLRTATVDDLAKIQSQAALIDNYEAGFDGHWEAFSYSAAVFLS
HHHHHHCCCCCHHHHHHHHHHCCHHHHHHHHHHHHHHCCCCCCCCCCCHHEEEEEEEEEE
KSELGTRTVLNPASGIYEPVRAPQEIKGIELAASYDVNDELTLGANYSWMEGKDTDQDIY
CCCCCCEEEECCCCCCHHHHCCCCCCCCEEEEEECCCCCCEEECCCCEECCCCCCCCEEE
LDGQAITPPKFAAYLDWATTDNSSVSLTWLHVGDRKRFEPVNGQYSGSQGPVESYSLLNL
ECCCCCCCCCEEEEEEEECCCCCEEEEEEEEECCCCCCCCCCCCCCCCCCCCCCEEEEEE
AGNYRVDQLLFTLGVENLLNEDYYSARSQAFTFPGYNTKGLGTTVNMGLKWSF
CCCCCHHHHHHHHHHHHHHCCHHHHHCCCEEECCCCCCCCCCEEEECCEEECC
>Mature Secondary Structure
MKLSPVAIALSPLMALTAAPAFAEVKDTTSPDTIAIERMIVTGSRVPERLDEVPSSVTLI
CCCCCHHHHHHHHHHHHCCCCHHHHCCCCCCCEEEEEEEEECCCCCHHHHHHCCCCEEEE
DSKTLATEMSISSELQNMLATRVPGMSPATGTSSNAGQTLRGRKALILIDGVPQSTPLRN
ECCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCEECCCEEEEEEECCCCCCCCCC
GSLDIRSIDMNAIERVEVIKGATSIYGNGAAGGIINYITKKPGADGAIGGVLGVSSRFSA
CCEEEEEECHHHHHHHHHHHCCHHCCCCCCCCCHHHHHHCCCCCCCCCHHHHCCCCCCEE
VKFEDSVGSRVEGALNGSVGQLGYLISASRDDYGLQRDAEGDVPGLVYGLSETTTDNLFT
EEECCCCCCCCCHHCCCCCCCEEEEEECCCCCCCCCCCCCCCCCEEEEECCCCCCCCEEE
KFHFNFDDEKSLQLTYNYFSSAQDARMVDVTGSVNSGQKTYAIEAGPDTLILGEPQGVDG
EEEECCCCCCCEEEEEEECCCCCCCEEEEEECCCCCCCEEEEEECCCCEEEEECCCCCCC
NHNLMVKYEDLALFDNTRLAIDAYGQKIENVFFYSLTLANPEQGLDGGQSIIRSEKRGVR
CCEEEEEEECEEEECCCEEEEEHHHHHHCEEEEEEEEECCCCCCCCHHHHHHHHHHCCCE
ANFNSDFTLGDTELDLLYGIDYLQDVSSQPLVDGRMWVPEMDMQNLAFYLQAKWLFAEDW
ECCCCCEEECCCCEEHHCCCHHHHCCCCCCCCCCEECCCCCCHHHEEEEEEEEEEEECCH
VLKAGVRRDQMAIEVDDYQTLRLCRTATQCSTPVAVKGGELEFDANTYNIGLRYKGSTVF
HHHCCCCCCCEEEEECCCHHHHHHHHHHHCCCCEEEECCEEEECCCEEEEEEEECCCCHH
SPFISFSQGADISDLGLLLRTATVDDLAKIQSQAALIDNYEAGFDGHWEAFSYSAAVFLS
HHHHHHCCCCCHHHHHHHHHHCCHHHHHHHHHHHHHHCCCCCCCCCCCHHEEEEEEEEEE
KSELGTRTVLNPASGIYEPVRAPQEIKGIELAASYDVNDELTLGANYSWMEGKDTDQDIY
CCCCCCEEEECCCCCCHHHHCCCCCCCCEEEEEECCCCCCEEECCCCEECCCCCCCCEEE
LDGQAITPPKFAAYLDWATTDNSSVSLTWLHVGDRKRFEPVNGQYSGSQGPVESYSLLNL
ECCCCCCCCCEEEEEEEECCCCCEEEEEEEEECCCCCCCCCCCCCCCCCCCCCCEEEEEE
AGNYRVDQLLFTLGVENLLNEDYYSARSQAFTFPGYNTKGLGTTVNMGLKWSF
CCCCCHHHHHHHHHHHHHHCCHHHHHCCCEEECCCCCCCCCCEEEECCEEECC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 11274118; 11481432 [H]