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The map label for this gene is 119774397

Identifier: 119774397

GI number: 119774397

Start: 1547696

End: 1548205

Strand: Reverse

Name: 119774397

Synonym: Sama_1260

Alternate gene names: NA

Gene position: 1548205-1547696 (Counterclockwise)

Preceding gene: 119774407

Following gene: 119774386

Centisome position: 35.95

GC content: 44.12

Gene sequence:

>510_bases
ATGATTTATTCATTTAGAAATTCCGGATTCAGGGATCCAGAAACGGGCGTTTACAATCAAACCTACTTTATGGAAGTCTT
TAACCGGGAATGGCACAGACATATCCGCGACAATCAAAGTCTGGCCCTATTGTATCTATACCCCAACATTCGTGAAACAA
GAAAACACCCAGGTCTGATGGAGCTGTTCAGCAAAGAATTGGAGAAGGCTTTACTGCGCTCAAGCGACTTAATTGCCCGT
ATGAGTAATGAATGTTTTGCCTTGGGGCTTTTCAATATCGATATAGAGGGCACGGCTGTAGTGGCAAACCGCATTGAAGA
AAACATCCAGGGCTTTATTAAAGGGTTCGATAAAGACCCGAGTATCCAGATGAACTACAAGCTTGCCGCCTGCATCTGTT
CGCCTAACAGGGATAAACGCATAGAAAAGCTATTTATCAATACCGAAGCCATGGCCCAAACCTTGACGCAGGAAAGAGAC
AAACACAGTGTCGTGGGAAACCTGCAATAA

Upstream 100 bases:

>100_bases
TTGCCAACAACGTTTTTTGCATAGTCTTTCATCTCCCTATGACGATGTAACCTGCGATGTTTTCTATACTGATAATTAAG
TTAACGCAGGAGTTCGCCTT

Downstream 100 bases:

>100_bases
AAAAAGCCACCCTAAGGTGGCTTTTTCGATTGCTTATAAGTGTTAGAGCGTCACGTTGTTGATGCGTGCTTTCTCTTGAA
TATAAGAGATGTAGCTCTTG

Product: response regulator receiver protein

Products: NA

Alternate protein names: GGDEF Domain-Containing Protein; Response Regulator Receiver Protein

Number of amino acids: Translated: 169; Mature: 169

Protein sequence:

>169_residues
MIYSFRNSGFRDPETGVYNQTYFMEVFNREWHRHIRDNQSLALLYLYPNIRETRKHPGLMELFSKELEKALLRSSDLIAR
MSNECFALGLFNIDIEGTAVVANRIEENIQGFIKGFDKDPSIQMNYKLAACICSPNRDKRIEKLFINTEAMAQTLTQERD
KHSVVGNLQ

Sequences:

>Translated_169_residues
MIYSFRNSGFRDPETGVYNQTYFMEVFNREWHRHIRDNQSLALLYLYPNIRETRKHPGLMELFSKELEKALLRSSDLIAR
MSNECFALGLFNIDIEGTAVVANRIEENIQGFIKGFDKDPSIQMNYKLAACICSPNRDKRIEKLFINTEAMAQTLTQERD
KHSVVGNLQ
>Mature_169_residues
MIYSFRNSGFRDPETGVYNQTYFMEVFNREWHRHIRDNQSLALLYLYPNIRETRKHPGLMELFSKELEKALLRSSDLIAR
MSNECFALGLFNIDIEGTAVVANRIEENIQGFIKGFDKDPSIQMNYKLAACICSPNRDKRIEKLFINTEAMAQTLTQERD
KHSVVGNLQ

Specific function: Unknown

COG id: COG2199

COG function: function code T; FOG: GGDEF domain

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 19701; Mature: 19701

Theoretical pI: Translated: 7.50; Mature: 7.50

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.8 %Cys     (Translated Protein)
3.6 %Met     (Translated Protein)
5.3 %Cys+Met (Translated Protein)
1.8 %Cys     (Mature Protein)
3.6 %Met     (Mature Protein)
5.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MIYSFRNSGFRDPETGVYNQTYFMEVFNREWHRHIRDNQSLALLYLYPNIRETRKHPGLM
CEECCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCCEEEEEECCCHHHHHCCCCHH
ELFSKELEKALLRSSDLIARMSNECFALGLFNIDIEGTAVVANRIEENIQGFIKGFDKDP
HHHHHHHHHHHHHHHHHHHHHCCCEEEEEEEEECCCCHHHHHHHHHHHHHHHHHCCCCCC
SIQMNYKLAACICSPNRDKRIEKLFINTEAMAQTLTQERDKHSVVGNLQ
CEEEEEEEEEEEECCCCCCHHHHHHCCHHHHHHHHHHHHHHHCCCCCCC
>Mature Secondary Structure
MIYSFRNSGFRDPETGVYNQTYFMEVFNREWHRHIRDNQSLALLYLYPNIRETRKHPGLM
CEECCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCCEEEEEECCCHHHHHCCCCHH
ELFSKELEKALLRSSDLIARMSNECFALGLFNIDIEGTAVVANRIEENIQGFIKGFDKDP
HHHHHHHHHHHHHHHHHHHHHCCCEEEEEEEEECCCCHHHHHHHHHHHHHHHHHCCCCCC
SIQMNYKLAACICSPNRDKRIEKLFINTEAMAQTLTQERDKHSVVGNLQ
CEEEEEEEEEEEECCCCCCHHHHHHCCHHHHHHHHHHHHHHHCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA