| Definition | Shewanella amazonensis SB2B chromosome, complete genome. |
|---|---|
| Accession | NC_008700 |
| Length | 4,306,142 |
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The map label for this gene is 119774351
Identifier: 119774351
GI number: 119774351
Start: 1494459
End: 1494713
Strand: Direct
Name: 119774351
Synonym: Sama_1214
Alternate gene names: NA
Gene position: 1494459-1494713 (Clockwise)
Preceding gene: 119774338
Following gene: 119774352
Centisome position: 34.71
GC content: 49.8
Gene sequence:
>255_bases ATGAAATTGAGTGACCTTCGCCCGGGCGATAAAGCCGTAATCGCCGAAGTAGGGCATTTGGACCTGCCTCAAACAGTTAA ACGTAAATTGCTGTCGATGGGGATAACACCCAACACCCGTTTGACTTTTATCCGTAAGGCACCCCTGGGCAGTGGTATAG AGCTCGATATCCGCGGCAGTAAGCTTTGTATGCGTCTGGAGTTGGCTCAAATCATTGAGGTCAATCCAATTGAGGCGGGA GTCGTTCATGGCTAA
Upstream 100 bases:
>100_bases TACCAGTCAGAAAGTTGATCCAGGTACGATTATCCACTGATGGACTTGGTTAGAATGCCTGTCAGTCGATGATTGAGATT AAGCAGGGTGGACCTTGTTA
Downstream 100 bases:
>100_bases GCAATTTCACTGTGTCACCGTTGGTAATCCCAATGCCGGTAAGTCCACCCTTTTTAATGCCTTGACCGGTGCCAACCAAC AAGTGGGTAATTGGTCAGGG
Product: ferrous iron transport protein A
Products: NA
Alternate protein names: Ferrous Iron Transport Protein A; FeoA Protein
Number of amino acids: Translated: 84; Mature: 84
Protein sequence:
>84_residues MKLSDLRPGDKAVIAEVGHLDLPQTVKRKLLSMGITPNTRLTFIRKAPLGSGIELDIRGSKLCMRLELAQIIEVNPIEAG VVHG
Sequences:
>Translated_84_residues MKLSDLRPGDKAVIAEVGHLDLPQTVKRKLLSMGITPNTRLTFIRKAPLGSGIELDIRGSKLCMRLELAQIIEVNPIEAG VVHG >Mature_84_residues MKLSDLRPGDKAVIAEVGHLDLPQTVKRKLLSMGITPNTRLTFIRKAPLGSGIELDIRGSKLCMRLELAQIIEVNPIEAG VVHG
Specific function: Unknown
COG id: COG1918
COG function: function code P; Fe2+ transport system protein A
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 9141; Mature: 9141
Theoretical pI: Translated: 10.12; Mature: 10.12
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.2 %Cys (Translated Protein) 3.6 %Met (Translated Protein) 4.8 %Cys+Met (Translated Protein) 1.2 %Cys (Mature Protein) 3.6 %Met (Mature Protein) 4.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKLSDLRPGDKAVIAEVGHLDLPQTVKRKLLSMGITPNTRLTFIRKAPLGSGIELDIRGS CCCCCCCCCCCEEEEECCCCCCCHHHHHHHHHCCCCCCCEEEEEEECCCCCCCEEEECCC KLCMRLELAQIIEVNPIEAGVVHG CEEEHEEHHHHHCCCCCCCCCCCC >Mature Secondary Structure MKLSDLRPGDKAVIAEVGHLDLPQTVKRKLLSMGITPNTRLTFIRKAPLGSGIELDIRGS CCCCCCCCCCCEEEEECCCCCCCHHHHHHHHHCCCCCCCEEEEEEECCCCCCCEEEECCC KLCMRLELAQIIEVNPIEAGVVHG CEEEHEEHHHHHCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA