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The map label for this gene is 119774347

Identifier: 119774347

GI number: 119774347

Start: 1486776

End: 1488959

Strand: Reverse

Name: 119774347

Synonym: Sama_1210

Alternate gene names: NA

Gene position: 1488959-1486776 (Counterclockwise)

Preceding gene: 119774348

Following gene: 119774346

Centisome position: 34.58

GC content: 54.99

Gene sequence:

>2184_bases
ATGAACTTCCAAAGACAGGTGTACAGGACTACCCGCCTGGCGTTGGCCGCCCTGATATCGCTGACACTATTTGCCTGTGG
CAGCGACGGTGAGGACGGTAAAGATGGCGAGGACGGCGTTGTTGGCGTCAATATTGATTCTACTGCCACGCTTAAGGTGA
ACTTCACCGATGCCAGGGTCGAAGATGGCAAAGTCACTGCCGACTTTATACTGACCAATGCCAATGGCGTTGCTGTGCTT
GGGTTAACCAAGGCGCACGACCTCCGATTTGGCATCGCCCAGTTAACCCAGGTTACCCAAACCATAGGTACGGGAGACGA
GGCCAGAGAAGCCGACCTGGGTTATCAGTGGCAGGCCTATATCAACAGTCTTCGCCAGCCAGGCACAGTGCCGGAAGGTG
TGGATGGCCTTAACCCGTCCCCCCAATATCAGGCGGGCGTGGAAGCCGCCAACGGTTGTGATACCTGCTTGGTTGACCAT
GGCGACGGCAGCTACAGCTACAGTTTTCAGGTGAACATCGCCCAGGTCACAGAACCACTGGCGGTAGTTTACAATGCGGA
TGCCACCCAAAGGATCACCATGGAGCTGAAGCTGCCTCAGGTGGTTGCAAACGGTCATTTCGATTGGCAGCCCTCCAGCG
GCAACACCGAAGGCATTCAAACCCGAAATGTGGTCACCATCAAGGCCTGTTATACCTGTCACCAACCGGAAAGCCTGGAG
TTACACGGTGGACGCAGGCTGGATCTGGAAAACTGTGTTGCTTGCCATACGGCAACCTCCGGCGATCCTGAATCGGGCAA
CAGTGTCGAATTCACCTACCTTATTCACGCCATCCACCGTGGTGCAGAACGTCATACCTTTGATGCCGATGGCAATCAGG
TAGACGACCCGTACAAGATTGTGGGATTCGGCGGCAGTGTGCATGACTATGGTTTGGTGCACTTCCCGAGAAAACCGGCG
TCCGACTGCAGTGTGTGTCACCAGGAAGGCACAGGTGCACCCGCAGACGCCGCGCTCTTCAAAGCCGAAAAGAGCAACAC
CGCCTGCGTGGCCTGCCACTCGGAAAAGCCCTCCTCCCATCACGCCAGCACTGACTGTATGGCATGCCACAATACCGACA
ACACTTACCATGGCACCGGCAGCCCTACCAAACGCCACGGCGATGTAATGAAGGCCTACACTCTGGCAAGCGAGCTGAGC
GTCAAAGTACTCGATGTCAGTGCCAATGCAGGCAAAATGACCTTTAAGGTGCAGGTGCTGGACAAAAATGGCGCACCGAT
GGACCAGACGTTTATCAACCAAAGCAGCCGCATGGTCGTGGCCTGGGATGTAGATAAAGACTATCCCGCCTACAATGAAG
CCTCCTACAGCAATCGTCGCATTCGCTTGAGCGAAGGCAGCTACGATGCCACCGAGAAAAGCTACACGCTGACGCCAAGT
GCGGCTCTGCCTGCAATGCCGGACGGAAAGAGCTTTGAGATTTGGTCCACACTGGAGGCCTGTTTCAATAACGGTGGTTA
TGGGGTTGAAGATATACAACTGACTGATTGCAGTGCTGATGGGGTCAGAACCGTTGCCATTAAAGAAAGCCCCTATCGCT
TTGTTTGGGGCAATAATGGTATCGACAGCTCGCAGCCAGCGGCTATGCGCCGTGCCATTATCGACACCGCCAAGTGCCAG
GCGTGCCATGGTCAGGAAATTCACCACTATGACAACGGCGTCAATTGCCAGACATGCCACACCTCGGATAAAACACTGAG
AAACAGTACAACCTATCCCGGTGGTCGTATGCCCAGCAGCTTTGCCTGGAAGGCACACGAGCGTGAAGGCCACTATCTCA
AGTATGGCGGGCTGCAATCGGGAACCGTGCTCAAGACCGATTGCGCCACCTGCCACACCGAAGCTGGCAACAGCGTTACC
GGCATCACCCTTGGTCGAGCACCTGAACGTGTGTGGCGCTATGGTGACACTCAAAACAATGGTGCCGAAATCTGGGTCTC
TTCCGATGCAGGAAGTTGCCTGAGCTGCCACCAACAATACTTGAGTGATGCCGCCAAATCACACATCACGGCCAACGGCG
GTATTCTGGATGGAATGGATGAGGCCGATGTCCGCAATCGTGCCAAAGAAACCTGTTCTACCTGCCATACGCCAACGCAG
CTAATGGAAGTTCACGGCAACTGA

Upstream 100 bases:

>100_bases
CATTGATGATTAAAAAGCCGCCCTTTTTGGGCGGCGATAATTAGGGGGCCAGCTGTCATCGGTCCCATTCGTGCAATAAA
CGCAATGCAGGGATACAAAG

Downstream 100 bases:

>100_bases
GGTGTATCAGCAGTTTGATACCCCTTAAATGGTAAACACCCAAAAGGGAGGCAATCGCCTCCCTTTTTGTTGTGTCTTTT
TGTAATCCGCACTGGGTAAA

Product: decaheme cytochrome c

Products: NA

Alternate protein names: Decaheme Cytochrome C MtrF; Decaheme C-Type Cytochrome OmcA/MtrC Family; DeCa-Heme C-Type Cytochrome; Decaheme Cytochrome C-Like Protein

Number of amino acids: Translated: 727; Mature: 727

Protein sequence:

>727_residues
MNFQRQVYRTTRLALAALISLTLFACGSDGEDGKDGEDGVVGVNIDSTATLKVNFTDARVEDGKVTADFILTNANGVAVL
GLTKAHDLRFGIAQLTQVTQTIGTGDEAREADLGYQWQAYINSLRQPGTVPEGVDGLNPSPQYQAGVEAANGCDTCLVDH
GDGSYSYSFQVNIAQVTEPLAVVYNADATQRITMELKLPQVVANGHFDWQPSSGNTEGIQTRNVVTIKACYTCHQPESLE
LHGGRRLDLENCVACHTATSGDPESGNSVEFTYLIHAIHRGAERHTFDADGNQVDDPYKIVGFGGSVHDYGLVHFPRKPA
SDCSVCHQEGTGAPADAALFKAEKSNTACVACHSEKPSSHHASTDCMACHNTDNTYHGTGSPTKRHGDVMKAYTLASELS
VKVLDVSANAGKMTFKVQVLDKNGAPMDQTFINQSSRMVVAWDVDKDYPAYNEASYSNRRIRLSEGSYDATEKSYTLTPS
AALPAMPDGKSFEIWSTLEACFNNGGYGVEDIQLTDCSADGVRTVAIKESPYRFVWGNNGIDSSQPAAMRRAIIDTAKCQ
ACHGQEIHHYDNGVNCQTCHTSDKTLRNSTTYPGGRMPSSFAWKAHEREGHYLKYGGLQSGTVLKTDCATCHTEAGNSVT
GITLGRAPERVWRYGDTQNNGAEIWVSSDAGSCLSCHQQYLSDAAKSHITANGGILDGMDEADVRNRAKETCSTCHTPTQ
LMEVHGN

Sequences:

>Translated_727_residues
MNFQRQVYRTTRLALAALISLTLFACGSDGEDGKDGEDGVVGVNIDSTATLKVNFTDARVEDGKVTADFILTNANGVAVL
GLTKAHDLRFGIAQLTQVTQTIGTGDEAREADLGYQWQAYINSLRQPGTVPEGVDGLNPSPQYQAGVEAANGCDTCLVDH
GDGSYSYSFQVNIAQVTEPLAVVYNADATQRITMELKLPQVVANGHFDWQPSSGNTEGIQTRNVVTIKACYTCHQPESLE
LHGGRRLDLENCVACHTATSGDPESGNSVEFTYLIHAIHRGAERHTFDADGNQVDDPYKIVGFGGSVHDYGLVHFPRKPA
SDCSVCHQEGTGAPADAALFKAEKSNTACVACHSEKPSSHHASTDCMACHNTDNTYHGTGSPTKRHGDVMKAYTLASELS
VKVLDVSANAGKMTFKVQVLDKNGAPMDQTFINQSSRMVVAWDVDKDYPAYNEASYSNRRIRLSEGSYDATEKSYTLTPS
AALPAMPDGKSFEIWSTLEACFNNGGYGVEDIQLTDCSADGVRTVAIKESPYRFVWGNNGIDSSQPAAMRRAIIDTAKCQ
ACHGQEIHHYDNGVNCQTCHTSDKTLRNSTTYPGGRMPSSFAWKAHEREGHYLKYGGLQSGTVLKTDCATCHTEAGNSVT
GITLGRAPERVWRYGDTQNNGAEIWVSSDAGSCLSCHQQYLSDAAKSHITANGGILDGMDEADVRNRAKETCSTCHTPTQ
LMEVHGN
>Mature_727_residues
MNFQRQVYRTTRLALAALISLTLFACGSDGEDGKDGEDGVVGVNIDSTATLKVNFTDARVEDGKVTADFILTNANGVAVL
GLTKAHDLRFGIAQLTQVTQTIGTGDEAREADLGYQWQAYINSLRQPGTVPEGVDGLNPSPQYQAGVEAANGCDTCLVDH
GDGSYSYSFQVNIAQVTEPLAVVYNADATQRITMELKLPQVVANGHFDWQPSSGNTEGIQTRNVVTIKACYTCHQPESLE
LHGGRRLDLENCVACHTATSGDPESGNSVEFTYLIHAIHRGAERHTFDADGNQVDDPYKIVGFGGSVHDYGLVHFPRKPA
SDCSVCHQEGTGAPADAALFKAEKSNTACVACHSEKPSSHHASTDCMACHNTDNTYHGTGSPTKRHGDVMKAYTLASELS
VKVLDVSANAGKMTFKVQVLDKNGAPMDQTFINQSSRMVVAWDVDKDYPAYNEASYSNRRIRLSEGSYDATEKSYTLTPS
AALPAMPDGKSFEIWSTLEACFNNGGYGVEDIQLTDCSADGVRTVAIKESPYRFVWGNNGIDSSQPAAMRRAIIDTAKCQ
ACHGQEIHHYDNGVNCQTCHTSDKTLRNSTTYPGGRMPSSFAWKAHEREGHYLKYGGLQSGTVLKTDCATCHTEAGNSVT
GITLGRAPERVWRYGDTQNNGAEIWVSSDAGSCLSCHQQYLSDAAKSHITANGGILDGMDEADVRNRAKETCSTCHTPTQ
LMEVHGN

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 78512; Mature: 78512

Theoretical pI: Translated: 5.59; Mature: 5.59

Prosite motif: PS00013 PROKAR_LIPOPROTEIN ; PS51008 MULTIHEME_CYTC

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

3.4 %Cys     (Translated Protein)
1.7 %Met     (Translated Protein)
5.1 %Cys+Met (Translated Protein)
3.4 %Cys     (Mature Protein)
1.7 %Met     (Mature Protein)
5.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNFQRQVYRTTRLALAALISLTLFACGSDGEDGKDGEDGVVGVNIDSTATLKVNFTDARV
CCCHHHHHHHHHHHHHHHHHHHHEECCCCCCCCCCCCCCEEEEECCCEEEEEEEEECCEE
EDGKVTADFILTNANGVAVLGLTKAHDLRFGIAQLTQVTQTIGTGDEAREADLGYQWQAY
CCCCEEEEEEEECCCCEEEEEECCCCHHHHHHHHHHHHHHHHCCCCCHHHCCCCEEHHHH
INSLRQPGTVPEGVDGLNPSPQYQAGVEAANGCDTCLVDHGDGSYSYSFQVNIAQVTEPL
HHHHCCCCCCCCCCCCCCCCCCHHCCCCCCCCCCEEEEECCCCCEEEEEEEEHHHHCCCE
AVVYNADATQRITMELKLPQVVANGHFDWQPSSGNTEGIQTRNVVTIKACYTCHQPESLE
EEEECCCCCEEEEEEEECCCCEECCCCEECCCCCCCCCEEECCEEEEEEEEECCCCCCEE
LHGGRRLDLENCVACHTATSGDPESGNSVEFTYLIHAIHRGAERHTFDADGNQVDDPYKI
ECCCCEECHHHHEEEECCCCCCCCCCCCEEEHHHHHHHHCCCCCCEECCCCCCCCCCEEE
VGFGGSVHDYGLVHFPRKPASDCSVCHQEGTGAPADAALFKAEKSNTACVACHSEKPSSH
EEECCCCCCCCEEECCCCCCCHHHHHHHCCCCCCCCHHEEEECCCCCEEEEECCCCCCCC
HASTDCMACHNTDNTYHGTGSPTKRHGDVMKAYTLASELSVKVLDVSANAGKMTFKVQVL
CCCCCEEEEECCCCCEECCCCCCCCCCCHHHHHHHHHHCEEEEEEEECCCCEEEEEEEEE
DKNGAPMDQTFINQSSRMVVAWDVDKDYPAYNEASYSNRRIRLSEGSYDATEKSYTLTPS
ECCCCCCCHHHHCCCCCEEEEEECCCCCCCCCCCCCCCCEEEEECCCCCCCCCEEEECCC
AALPAMPDGKSFEIWSTLEACFNNGGYGVEDIQLTDCSADGVRTVAIKESPYRFVWGNNG
CCCCCCCCCCCCHHHHHHHHHHCCCCCCEEEEEEECCCCCCEEEEEEECCCEEEEECCCC
IDSSQPAAMRRAIIDTAKCQACHGQEIHHYDNGVNCQTCHTSDKTLRNSTTYPGGRMPSS
CCCCCHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCEEEECCCCCHHCCCCCCCCCCCCCC
FAWKAHEREGHYLKYGGLQSGTVLKTDCATCHTEAGNSVTGITLGRAPERVWRYGDTQNN
CEEEEECCCCCEEEECCCCCCCEEEECCCCCCCCCCCEEEEEEECCCHHHHHHCCCCCCC
GAEIWVSSDAGSCLSCHQQYLSDAAKSHITANGGILDGMDEADVRNRAKETCSTCHTPTQ
CCEEEEECCCCHHHHHHHHHHHHHHHHCEECCCCEECCCCHHHHHHHHHHHHHHCCCCHH
LMEVHGN
HHEECCC
>Mature Secondary Structure
MNFQRQVYRTTRLALAALISLTLFACGSDGEDGKDGEDGVVGVNIDSTATLKVNFTDARV
CCCHHHHHHHHHHHHHHHHHHHHEECCCCCCCCCCCCCCEEEEECCCEEEEEEEEECCEE
EDGKVTADFILTNANGVAVLGLTKAHDLRFGIAQLTQVTQTIGTGDEAREADLGYQWQAY
CCCCEEEEEEEECCCCEEEEEECCCCHHHHHHHHHHHHHHHHCCCCCHHHCCCCEEHHHH
INSLRQPGTVPEGVDGLNPSPQYQAGVEAANGCDTCLVDHGDGSYSYSFQVNIAQVTEPL
HHHHCCCCCCCCCCCCCCCCCCHHCCCCCCCCCCEEEEECCCCCEEEEEEEEHHHHCCCE
AVVYNADATQRITMELKLPQVVANGHFDWQPSSGNTEGIQTRNVVTIKACYTCHQPESLE
EEEECCCCCEEEEEEEECCCCEECCCCEECCCCCCCCCEEECCEEEEEEEEECCCCCCEE
LHGGRRLDLENCVACHTATSGDPESGNSVEFTYLIHAIHRGAERHTFDADGNQVDDPYKI
ECCCCEECHHHHEEEECCCCCCCCCCCCEEEHHHHHHHHCCCCCCEECCCCCCCCCCEEE
VGFGGSVHDYGLVHFPRKPASDCSVCHQEGTGAPADAALFKAEKSNTACVACHSEKPSSH
EEECCCCCCCCEEECCCCCCCHHHHHHHCCCCCCCCHHEEEECCCCCEEEEECCCCCCCC
HASTDCMACHNTDNTYHGTGSPTKRHGDVMKAYTLASELSVKVLDVSANAGKMTFKVQVL
CCCCCEEEEECCCCCEECCCCCCCCCCCHHHHHHHHHHCEEEEEEEECCCCEEEEEEEEE
DKNGAPMDQTFINQSSRMVVAWDVDKDYPAYNEASYSNRRIRLSEGSYDATEKSYTLTPS
ECCCCCCCHHHHCCCCCEEEEEECCCCCCCCCCCCCCCCEEEEECCCCCCCCCEEEECCC
AALPAMPDGKSFEIWSTLEACFNNGGYGVEDIQLTDCSADGVRTVAIKESPYRFVWGNNG
CCCCCCCCCCCCHHHHHHHHHHCCCCCCEEEEEEECCCCCCEEEEEEECCCEEEEECCCC
IDSSQPAAMRRAIIDTAKCQACHGQEIHHYDNGVNCQTCHTSDKTLRNSTTYPGGRMPSS
CCCCCHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCEEEECCCCCHHCCCCCCCCCCCCCC
FAWKAHEREGHYLKYGGLQSGTVLKTDCATCHTEAGNSVTGITLGRAPERVWRYGDTQNN
CEEEEECCCCCEEEECCCCCCCEEEECCCCCCCCCCCEEEEEEECCCHHHHHHCCCCCCC
GAEIWVSSDAGSCLSCHQQYLSDAAKSHITANGGILDGMDEADVRNRAKETCSTCHTPTQ
CCEEEEECCCCHHHHHHHHHHHHHHHHCEECCCCEECCCCHHHHHHHHHHHHHHCCCCHH
LMEVHGN
HHEECCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA