Definition Shewanella amazonensis SB2B chromosome, complete genome.
Accession NC_008700
Length 4,306,142

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The map label for this gene is eprA1 [H]

Identifier: 119774342

GI number: 119774342

Start: 1477415

End: 1478506

Strand: Reverse

Name: eprA1 [H]

Synonym: Sama_1205

Alternate gene names: 119774342

Gene position: 1478506-1477415 (Counterclockwise)

Preceding gene: 119774343

Following gene: 119774341

Centisome position: 34.33

GC content: 54.12

Gene sequence:

>1092_bases
ATGAAACACTCAACTCTGCTGACCGGCGCACTGCTGGGAGGAATGTTGTTTTCCACTTCAGCGCTGGCAGATGGGATCCG
TGCCAGCCTCGAAATGAGCAAGCAAAACTTCGCCGCCAACGAAGACGTGACCGTGCGCGTTACCCTGACAAACGATGAAA
AAGTGCCTGTGAAGGTACTCAAGTGGTACACCGCGGCAGACGGTGTGGAAGAGTCACTGTTTAAAGTGTCGGTTAATGGT
GAAGAAAAACATTACCTTGGCGCCCATTTCAAGCGTCCGGCGCCACAAAGCAAAGATTACATCAAGCTCAAGGCCGGCGA
GAGCGTCAGTTACGACGTAGAGCTGTCTTCCCTGTACGACATGACCGAACAGGGCAATTATGAAATCGCTTACCAAGTCA
GTTCACTGCAACTTTTTGCCCCGAATCCTGGCCAGCAAAACAAACTGGCACGCCTGGGTATCGAGGGAATTCAATCTGAT
GCGGTAAGTTTCTTCCATGAAGGAATTGAAGCAAAAAGCGGTGCCAACAAGGGTAAGCCCGGCAGCGGTGACGGTGGCGG
TACTCCCACAGAAGGCGTCAGCTTCAGCGGTCGCTGCTCCAACAGCCAGATGAGCGACACCCTCGCAGGCTTAGCCGCCG
CCAAATCCATGGCTGCCGATGCCAAAGGCTATCTCGCCAATAACAACAGCCCTGCCAGTTCAGTGCGCTACAACACCTGG
TTTGGCAGCTACAACAGCAGCCGCTGGAACACGGTCAGCAATAATTTCAGCGCCATCGACTCGGCCCTGAATACCCAACC
GCTGACGTTCGATTGCAGCTGTAAGAAGAGCTACTACGCCTACGTATATCCTAACCAGCCTTACAAGATATACCTGTGCA
ATGCCTTCTGGAGCGCCCCAGTGTCCGGCACCGACTCCAAGGGCGGTACCATAGTCCATGAGATGAGCCACTTTGATGTG
GTCGCCGGCACCGACGATGTCGTTTACGGCCAGAGTGGCGCCAAGAGCCTGGCCCAGAGCAATCCGGATCAAGCGATCCA
GAACGCCGACAGCCACGAATACTTTGCGGAAAATACACCCTTCCAAAACTGA

Upstream 100 bases:

>100_bases
TCGCCAAAGACAAAAGTCTTACACTGCCAGCGCTACATTTTTATAACATATATAACAATGCAAGTTACAAACCTGATAAC
AAGCTAAAGGACTCGCAAAC

Downstream 100 bases:

>100_bases
TTTACCCGCCGGTCTCATGGCCGGCACTCCCTTTGGGAACGGCCAGTTACCTTGTGAATTTTGGGCAGAGGATCTGCCCC
TTTTTTTGCCTTTTTGCCGC

Product: peptidyl-Lys metalloendopeptidase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 363; Mature: 363

Protein sequence:

>363_residues
MKHSTLLTGALLGGMLFSTSALADGIRASLEMSKQNFAANEDVTVRVTLTNDEKVPVKVLKWYTAADGVEESLFKVSVNG
EEKHYLGAHFKRPAPQSKDYIKLKAGESVSYDVELSSLYDMTEQGNYEIAYQVSSLQLFAPNPGQQNKLARLGIEGIQSD
AVSFFHEGIEAKSGANKGKPGSGDGGGTPTEGVSFSGRCSNSQMSDTLAGLAAAKSMAADAKGYLANNNSPASSVRYNTW
FGSYNSSRWNTVSNNFSAIDSALNTQPLTFDCSCKKSYYAYVYPNQPYKIYLCNAFWSAPVSGTDSKGGTIVHEMSHFDV
VAGTDDVVYGQSGAKSLAQSNPDQAIQNADSHEYFAENTPFQN

Sequences:

>Translated_363_residues
MKHSTLLTGALLGGMLFSTSALADGIRASLEMSKQNFAANEDVTVRVTLTNDEKVPVKVLKWYTAADGVEESLFKVSVNG
EEKHYLGAHFKRPAPQSKDYIKLKAGESVSYDVELSSLYDMTEQGNYEIAYQVSSLQLFAPNPGQQNKLARLGIEGIQSD
AVSFFHEGIEAKSGANKGKPGSGDGGGTPTEGVSFSGRCSNSQMSDTLAGLAAAKSMAADAKGYLANNNSPASSVRYNTW
FGSYNSSRWNTVSNNFSAIDSALNTQPLTFDCSCKKSYYAYVYPNQPYKIYLCNAFWSAPVSGTDSKGGTIVHEMSHFDV
VAGTDDVVYGQSGAKSLAQSNPDQAIQNADSHEYFAENTPFQN
>Mature_363_residues
MKHSTLLTGALLGGMLFSTSALADGIRASLEMSKQNFAANEDVTVRVTLTNDEKVPVKVLKWYTAADGVEESLFKVSVNG
EEKHYLGAHFKRPAPQSKDYIKLKAGESVSYDVELSSLYDMTEQGNYEIAYQVSSLQLFAPNPGQQNKLARLGIEGIQSD
AVSFFHEGIEAKSGANKGKPGSGDGGGTPTEGVSFSGRCSNSQMSDTLAGLAAAKSMAADAKGYLANNNSPASSVRYNTW
FGSYNSSRWNTVSNNFSAIDSALNTQPLTFDCSCKKSYYAYVYPNQPYKIYLCNAFWSAPVSGTDSKGGTIVHEMSHFDV
VAGTDDVVYGQSGAKSLAQSNPDQAIQNADSHEYFAENTPFQN

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the peptidase M35 family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001384 [H]

Pfam domain/function: PF02102 Peptidase_M35 [H]

EC number: NA

Molecular weight: Translated: 39075; Mature: 39075

Theoretical pI: Translated: 5.39; Mature: 5.39

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.1 %Cys     (Translated Protein)
1.9 %Met     (Translated Protein)
3.0 %Cys+Met (Translated Protein)
1.1 %Cys     (Mature Protein)
1.9 %Met     (Mature Protein)
3.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKHSTLLTGALLGGMLFSTSALADGIRASLEMSKQNFAANEDVTVRVTLTNDEKVPVKVL
CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEEEECCCCCCCCEEE
KWYTAADGVEESLFKVSVNGEEKHYLGAHFKRPAPQSKDYIKLKAGESVSYDVELSSLYD
EEHHHCCCCCCCEEEEEECCCCCEEECCCCCCCCCCCCCEEEEECCCCEEEEEEHHHHHH
MTEQGNYEIAYQVSSLQLFAPNPGQQNKLARLGIEGIQSDAVSFFHEGIEAKSGANKGKP
HHHCCCEEEEEEEEEEEEECCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCC
GSGDGGGTPTEGVSFSGRCSNSQMSDTLAGLAAAKSMAADAKGYLANNNSPASSVRYNTW
CCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCEEECCCCCCCCEEEEEE
FGSYNSSRWNTVSNNFSAIDSALNTQPLTFDCSCKKSYYAYVYPNQPYKIYLCNAFWSAP
ECCCCCCCCCCCCCCHHHHHHHHCCCCEEEEECCCCCEEEEEECCCCEEEEEEECEECCC
VSGTDSKGGTIVHEMSHFDVVAGTDDVVYGQSGAKSLAQSNPDQAIQNADSHEYFAENTP
CCCCCCCCCEEEEECCCEEEEECCCCEEECCCCHHHHHHCCHHHHHHCCCCCCHHCCCCC
FQN
CCC
>Mature Secondary Structure
MKHSTLLTGALLGGMLFSTSALADGIRASLEMSKQNFAANEDVTVRVTLTNDEKVPVKVL
CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEEEECCCCCCCCEEE
KWYTAADGVEESLFKVSVNGEEKHYLGAHFKRPAPQSKDYIKLKAGESVSYDVELSSLYD
EEHHHCCCCCCCEEEEEECCCCCEEECCCCCCCCCCCCCEEEEECCCCEEEEEEHHHHHH
MTEQGNYEIAYQVSSLQLFAPNPGQQNKLARLGIEGIQSDAVSFFHEGIEAKSGANKGKP
HHHCCCEEEEEEEEEEEEECCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCC
GSGDGGGTPTEGVSFSGRCSNSQMSDTLAGLAAAKSMAADAKGYLANNNSPASSVRYNTW
CCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCEEECCCCCCCCEEEEEE
FGSYNSSRWNTVSNNFSAIDSALNTQPLTFDCSCKKSYYAYVYPNQPYKIYLCNAFWSAP
ECCCCCCCCCCCCCCHHHHHHHHCCCCEEEEECCCCCEEEEEECCCCEEEEEEECEECCC
VSGTDSKGGTIVHEMSHFDVVAGTDDVVYGQSGAKSLAQSNPDQAIQNADSHEYFAENTP
CCCCCCCCCEEEEECCCEEEEECCCCEEECCCCHHHHHHCCHHHHHHCCCCCCHHCCCCC
FQN
CCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA