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The map label for this gene is yaeB [H]

Identifier: 119774301

GI number: 119774301

Start: 1419926

End: 1420663

Strand: Reverse

Name: yaeB [H]

Synonym: Sama_1164

Alternate gene names: 119774301

Gene position: 1420663-1419926 (Counterclockwise)

Preceding gene: 119774302

Following gene: 119774300

Centisome position: 32.99

GC content: 54.47

Gene sequence:

>738_bases
ATGAAAGCCTTTGAAAATACCATTCAAGCCGTGGCCGTTTGCCATACTCCGTACCGGCAAAAATTCGGTATCCCACGGCA
ACCCGGACTGGTCAATGCCCACGGGTTTGTTGAGCTGTTACCCCCTTTTAACGACCCGGACACTGTGCGTGGGCTTGAGC
AATACTCCCATCTGTGGCTGCTGTTTTGCTTTCACGAAAATCTGGCCCAGGGTTGGAAAAATACCGTGCGGCCACCGCGC
CTTGGCGGCAATGAAAAGCTGGGTGTCTTTGCCACCCGCTCCACCTTTCGTCCCAATGGCATAGGTCAATCTGTGGTGCG
ACTGCATGGCATAGTCAAACGCAAAGGGAAATTGTGTCTTGAAATCAGTGGGATGGATTTACTGGATGGCACCCCCATCA
TAGATATCAAGCCCTATATTCCCTTCTCTGATGCCATTGCAGACGCCCGTGGCGGCATTGCGCAGGACGCCCCTGTACTG
ATTGAAGTCAGCTACAGCGAGCTTGCCACTTTGCAAATCGCCACCCTCGGCCAGGACGATGCCCGGCCGGATTTGGCAGC
GCTGATTGACGGTGTCTTGGCCCAGGACCCACGCCCGGCGTACAAAAAGGCCAAAGAAGATCCCAAGTTGTATCAGGTCG
CCCTGTACGATCTGGACATATTCTGGTGTATTCAGGATGGCAAGGCCCATGTGCTTGAGCTTAAACCCACCAAGGTTGGC
GCACCCCATGACGGCTGA

Upstream 100 bases:

>100_bases
CAAAAACTGTACCCTCATCACCGAAGCAGCCGGTGGCTGCGAAACCCGCAGTCTGTGTGTGGGACAGGCCATTCGTCAGG
CAGTGCCCGCCAACTAAGCC

Downstream 100 bases:

>100_bases
TGATTTTCGTGAGCAGCATAAAAAGCGGCTCTCCTGGATGCCATGGCTGTATTTTTCATTGAAAGACAAACACAAAGCCT
GGGCTCTTCCCTGGCAGGCC

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 245; Mature: 245

Protein sequence:

>245_residues
MKAFENTIQAVAVCHTPYRQKFGIPRQPGLVNAHGFVELLPPFNDPDTVRGLEQYSHLWLLFCFHENLAQGWKNTVRPPR
LGGNEKLGVFATRSTFRPNGIGQSVVRLHGIVKRKGKLCLEISGMDLLDGTPIIDIKPYIPFSDAIADARGGIAQDAPVL
IEVSYSELATLQIATLGQDDARPDLAALIDGVLAQDPRPAYKKAKEDPKLYQVALYDLDIFWCIQDGKAHVLELKPTKVG
APHDG

Sequences:

>Translated_245_residues
MKAFENTIQAVAVCHTPYRQKFGIPRQPGLVNAHGFVELLPPFNDPDTVRGLEQYSHLWLLFCFHENLAQGWKNTVRPPR
LGGNEKLGVFATRSTFRPNGIGQSVVRLHGIVKRKGKLCLEISGMDLLDGTPIIDIKPYIPFSDAIADARGGIAQDAPVL
IEVSYSELATLQIATLGQDDARPDLAALIDGVLAQDPRPAYKKAKEDPKLYQVALYDLDIFWCIQDGKAHVLELKPTKVG
APHDG
>Mature_245_residues
MKAFENTIQAVAVCHTPYRQKFGIPRQPGLVNAHGFVELLPPFNDPDTVRGLEQYSHLWLLFCFHENLAQGWKNTVRPPR
LGGNEKLGVFATRSTFRPNGIGQSVVRLHGIVKRKGKLCLEISGMDLLDGTPIIDIKPYIPFSDAIADARGGIAQDAPVL
IEVSYSELATLQIATLGQDDARPDLAALIDGVLAQDPRPAYKKAKEDPKLYQVALYDLDIFWCIQDGKAHVLELKPTKVG
APHDG

Specific function: Unknown

COG id: COG1720

COG function: function code S; Uncharacterized conserved protein

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the UPF0066 (virR) family [H]

Homologues:

Organism=Homo sapiens, GI118600979, Length=131, Percent_Identity=42.7480916030534, Blast_Score=99, Evalue=2e-21,
Organism=Escherichia coli, GI1786393, Length=237, Percent_Identity=47.6793248945148, Blast_Score=236, Evalue=7e-64,
Organism=Drosophila melanogaster, GI24586408, Length=139, Percent_Identity=42.4460431654676, Blast_Score=97, Evalue=8e-21,
Organism=Drosophila melanogaster, GI45552503, Length=139, Percent_Identity=42.4460431654676, Blast_Score=97, Evalue=9e-21,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001378 [H]

Pfam domain/function: PF01980 UPF0066 [H]

EC number: NA

Molecular weight: Translated: 27001; Mature: 27001

Theoretical pI: Translated: 7.18; Mature: 7.18

Prosite motif: PS01318 UPF0066

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.6 %Cys     (Translated Protein)
0.8 %Met     (Translated Protein)
2.4 %Cys+Met (Translated Protein)
1.6 %Cys     (Mature Protein)
0.8 %Met     (Mature Protein)
2.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKAFENTIQAVAVCHTPYRQKFGIPRQPGLVNAHGFVELLPPFNDPDTVRGLEQYSHLWL
CCHHHHHHHHHHHHCCCHHHHCCCCCCCCEECCCCEEEECCCCCCCHHHHHHHHHHHHHH
LFCFHENLAQGWKNTVRPPRLGGNEKLGVFATRSTFRPNGIGQSVVRLHGIVKRKGKLCL
HHHHHHHHHHHHHHCCCCCCCCCCCCEEEEEECCCCCCCCCCHHHHHHHHHHHCCCCEEE
EISGMDLLDGTPIIDIKPYIPFSDAIADARGGIAQDAPVLIEVSYSELATLQIATLGQDD
EECCCEEECCCCEEEEECCCCCHHHHHHHCCCCCCCCCEEEEECHHHEEEEEEEECCCCC
ARPDLAALIDGVLAQDPRPAYKKAKEDPKLYQVALYDLDIFWCIQDGKAHVLELKPTKVG
CCCHHHHHHHHHHCCCCCHHHHHCCCCCCEEEEEEEEEEEEEEEECCCEEEEEECCCCCC
APHDG
CCCCC
>Mature Secondary Structure
MKAFENTIQAVAVCHTPYRQKFGIPRQPGLVNAHGFVELLPPFNDPDTVRGLEQYSHLWL
CCHHHHHHHHHHHHCCCHHHHCCCCCCCCEECCCCEEEECCCCCCCHHHHHHHHHHHHHH
LFCFHENLAQGWKNTVRPPRLGGNEKLGVFATRSTFRPNGIGQSVVRLHGIVKRKGKLCL
HHHHHHHHHHHHHHCCCCCCCCCCCCEEEEEECCCCCCCCCCHHHHHHHHHHHCCCCEEE
EISGMDLLDGTPIIDIKPYIPFSDAIADARGGIAQDAPVLIEVSYSELATLQIATLGQDD
EECCCEEECCCCEEEEECCCCCHHHHHHHCCCCCCCCCEEEEECHHHEEEEEEEECCCCC
ARPDLAALIDGVLAQDPRPAYKKAKEDPKLYQVALYDLDIFWCIQDGKAHVLELKPTKVG
CCCHHHHHHHHHHCCCCCHHHHHCCCCCCEEEEEEEEEEEEEEEECCCEEEEEECCCCCC
APHDG
CCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 1459951; 9278503 [H]