Definition Shewanella amazonensis SB2B chromosome, complete genome.
Accession NC_008700
Length 4,306,142

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The map label for this gene is 119774262

Identifier: 119774262

GI number: 119774262

Start: 1374946

End: 1375176

Strand: Reverse

Name: 119774262

Synonym: Sama_1125

Alternate gene names: NA

Gene position: 1375176-1374946 (Counterclockwise)

Preceding gene: 119774265

Following gene: 119774260

Centisome position: 31.94

GC content: 50.22

Gene sequence:

>231_bases
ATGGATACAACCCCCGTGGATCTCAGTCATTTATTTGAACAGTTGGGGCTGGACAGCAGTGATAAGGCCATCGGCCTGTT
TATTGAAAAGCATACTATAGGTGCCGACCTGGCCATTTGGCAGGCAGACTTCTGGACGCCGGCACAAGCCGGGTTTTTAA
GAGAATCGCTGGAAATGGATGCCAACTGGTCAGAACTCATTGACCTGTTGGACACCCGGCTACGTAAATAG

Upstream 100 bases:

>100_bases
CAATGTAACAAGCCTTGAAAAAAGTGCAATTATTAATCGAGTTTGCCTTTTTAACGCGAGCAATCAATTATTAACCCATG
GTGTCGGCCGGAGGAAGACT

Downstream 100 bases:

>100_bases
CTCAGCCCCGGCGATAGGCGGTTTCACCCCAGCCAACCAAACGGTTATCGTGCAGTACTACAGGAGTGCATTCTTCTTTG
GTGGTGCTGCCATCACCGTG

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 76; Mature: 76

Protein sequence:

>76_residues
MDTTPVDLSHLFEQLGLDSSDKAIGLFIEKHTIGADLAIWQADFWTPAQAGFLRESLEMDANWSELIDLLDTRLRK

Sequences:

>Translated_76_residues
MDTTPVDLSHLFEQLGLDSSDKAIGLFIEKHTIGADLAIWQADFWTPAQAGFLRESLEMDANWSELIDLLDTRLRK
>Mature_76_residues
MDTTPVDLSHLFEQLGLDSSDKAIGLFIEKHTIGADLAIWQADFWTPAQAGFLRESLEMDANWSELIDLLDTRLRK

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 8619; Mature: 8619

Theoretical pI: Translated: 4.13; Mature: 4.13

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
2.6 %Met     (Translated Protein)
2.6 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
2.6 %Met     (Mature Protein)
2.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MDTTPVDLSHLFEQLGLDSSDKAIGLFIEKHTIGADLAIWQADFWTPAQAGFLRESLEMD
CCCCCCCHHHHHHHHCCCCCCCEEEEEEECCCCCCCEEEECCCCCCCCHHHHHHHHHCCC
ANWSELIDLLDTRLRK
CCHHHHHHHHHHHHCC
>Mature Secondary Structure
MDTTPVDLSHLFEQLGLDSSDKAIGLFIEKHTIGADLAIWQADFWTPAQAGFLRESLEMD
CCCCCCCHHHHHHHHCCCCCCCEEEEEEECCCCCCCEEEECCCCCCCCHHHHHHHHHCCC
ANWSELIDLLDTRLRK
CCHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA