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The map label for this gene is 119774253

Identifier: 119774253

GI number: 119774253

Start: 1366840

End: 1367658

Strand: Reverse

Name: 119774253

Synonym: Sama_1116

Alternate gene names: NA

Gene position: 1367658-1366840 (Counterclockwise)

Preceding gene: 119774257

Following gene: 119774252

Centisome position: 31.76

GC content: 58.12

Gene sequence:

>819_bases
ATGAGTGCGGATAAATCAGCGCCTTCCCCAAAAACCGGCGCCAGACACCGCAATGCCACCACCACGGTGGAGATGCGCCG
TTTTATCCAGGAGTCGCCGCTGCCAGTGGCGGAACTTGCACGTTTGCTCAATATCACCCCGGCCACGGTGCGCAAGTGGA
AAAATCGCGCCACTGTGGCCGACAGCTCCAATCTGCCTCACCACCTCAACACCACCCTGACCCCGGTGCAGGAATACGTG
GTCGTGGGGCTTAGATACCAACTCAAGCTCACACTGGATAAGCTGCTCGAAGTCACCCAGCAACATATCAACCACGGGGT
ATCCCGCTCCGGTCTTGCCCGTTGTCTCAAGCGCCACGGCGTCTCACGCCTGGGTGATATCACCCCGGTTGATGCCCTGC
CAGATAAACACTTTGCCCTGTTACCCGTGTTTCGTGACAGCGGCACTGAAAACTATGCTCTGAACAGTCATACCCTGGCC
CAAACCCTGGCACTGCCCGCAGAAGACGAGCAAACCGTGGTGCAAGTGGAAGCCATGCATGTGCCCATTGAACAGGACGG
CTCCTATTCCGTGCTCATTGGCATGGCCACAGCCCACGACTGGGTGTATGTCGATATTTATCCGGACACAGAGGCCGATG
CCGACTTCAAGGCGGCCGACCGCTATATGAGCCATGTGCTCAATCAGGGGCCATTCCAGCTTAAAAAGCTGCTCGCCCGC
AATTATCAAACCTTCCTGGCGCGCTTTCCCGATGTCCGCGGCGCCAAGACCCGCAAAAAGACGCCGGAACGCCCGGCGCC
AACAGGAGTTGCCCAATGA

Upstream 100 bases:

>100_bases
TCCGGCTGATTGTGCGCTAAGTGACAATCCCGCGTTACCGTCAGCAGGCAGATAAACACCATCAAAGGACAGTCAATAAC
ACGATGGGAACCACAGCCGC

Downstream 100 bases:

>100_bases
GCGAGTCCAAGACTCAGGACGCGCAGGATCTGCGCCTTAACAAGCGTCTCAAGGACACCCCCATTGCCATCGTCGGCATG
GCGAGTCTCTTTGCCAACAG

Product: transcriptional regulator

Products: NA

Alternate protein names: Transcriptional Regulator; Integrase Catalytic Region; Integrase Catalytic Subunit; Integrase; Fis Family Transcriptional Regulator; Integrase Protein; Instegrase; ISKpn8 Transposase; Integrase Catalytic Domain-Containing Protein; Integrase Catalytic Core

Number of amino acids: Translated: 272; Mature: 271

Protein sequence:

>272_residues
MSADKSAPSPKTGARHRNATTTVEMRRFIQESPLPVAELARLLNITPATVRKWKNRATVADSSNLPHHLNTTLTPVQEYV
VVGLRYQLKLTLDKLLEVTQQHINHGVSRSGLARCLKRHGVSRLGDITPVDALPDKHFALLPVFRDSGTENYALNSHTLA
QTLALPAEDEQTVVQVEAMHVPIEQDGSYSVLIGMATAHDWVYVDIYPDTEADADFKAADRYMSHVLNQGPFQLKKLLAR
NYQTFLARFPDVRGAKTRKKTPERPAPTGVAQ

Sequences:

>Translated_272_residues
MSADKSAPSPKTGARHRNATTTVEMRRFIQESPLPVAELARLLNITPATVRKWKNRATVADSSNLPHHLNTTLTPVQEYV
VVGLRYQLKLTLDKLLEVTQQHINHGVSRSGLARCLKRHGVSRLGDITPVDALPDKHFALLPVFRDSGTENYALNSHTLA
QTLALPAEDEQTVVQVEAMHVPIEQDGSYSVLIGMATAHDWVYVDIYPDTEADADFKAADRYMSHVLNQGPFQLKKLLAR
NYQTFLARFPDVRGAKTRKKTPERPAPTGVAQ
>Mature_271_residues
SADKSAPSPKTGARHRNATTTVEMRRFIQESPLPVAELARLLNITPATVRKWKNRATVADSSNLPHHLNTTLTPVQEYVV
VGLRYQLKLTLDKLLEVTQQHINHGVSRSGLARCLKRHGVSRLGDITPVDALPDKHFALLPVFRDSGTENYALNSHTLAQ
TLALPAEDEQTVVQVEAMHVPIEQDGSYSVLIGMATAHDWVYVDIYPDTEADADFKAADRYMSHVLNQGPFQLKKLLARN
YQTFLARFPDVRGAKTRKKTPERPAPTGVAQ

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 30275; Mature: 30144

Theoretical pI: Translated: 9.67; Mature: 9.67

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.4 %Cys     (Translated Protein)
1.8 %Met     (Translated Protein)
2.2 %Cys+Met (Translated Protein)
0.4 %Cys     (Mature Protein)
1.5 %Met     (Mature Protein)
1.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSADKSAPSPKTGARHRNATTTVEMRRFIQESPLPVAELARLLNITPATVRKWKNRATVA
CCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHCCCCHHHHHHHHCCCHHHHHHHHCCCCCC
DSSNLPHHLNTTLTPVQEYVVVGLRYQLKLTLDKLLEVTQQHINHGVSRSGLARCLKRHG
CCCCCCCCCCCCHHHHHHHHHHHHHHEEEHHHHHHHHHHHHHHHCCCCHHHHHHHHHHCC
VSRLGDITPVDALPDKHFALLPVFRDSGTENYALNSHTLAQTLALPAEDEQTVVQVEAMH
HHHHCCCCCCCCCCCCCEEEEEEEECCCCCCEECCHHHHHHHHCCCCCCCCEEEEEEEEE
VPIEQDGSYSVLIGMATAHDWVYVDIYPDTEADADFKAADRYMSHVLNQGPFQLKKLLAR
CCCCCCCCEEEEEEEEECCCEEEEEEECCCCCCCCHHHHHHHHHHHHCCCHHHHHHHHHH
NYQTFLARFPDVRGAKTRKKTPERPAPTGVAQ
HHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCC
>Mature Secondary Structure 
SADKSAPSPKTGARHRNATTTVEMRRFIQESPLPVAELARLLNITPATVRKWKNRATVA
CCCCCCCCCCCCCCCCCCHHHHHHHHHHHHCCCCHHHHHHHHCCCHHHHHHHHCCCCCC
DSSNLPHHLNTTLTPVQEYVVVGLRYQLKLTLDKLLEVTQQHINHGVSRSGLARCLKRHG
CCCCCCCCCCCCHHHHHHHHHHHHHHEEEHHHHHHHHHHHHHHHCCCCHHHHHHHHHHCC
VSRLGDITPVDALPDKHFALLPVFRDSGTENYALNSHTLAQTLALPAEDEQTVVQVEAMH
HHHHCCCCCCCCCCCCCEEEEEEEECCCCCCEECCHHHHHHHHCCCCCCCCEEEEEEEEE
VPIEQDGSYSVLIGMATAHDWVYVDIYPDTEADADFKAADRYMSHVLNQGPFQLKKLLAR
CCCCCCCCEEEEEEEEECCCEEEEEEECCCCCCCCHHHHHHHHHHHHCCCHHHHHHHHHH
NYQTFLARFPDVRGAKTRKKTPERPAPTGVAQ
HHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA