Click here to switch to the map view.

The map label for this gene is baeR [H]

Identifier: 119774241

GI number: 119774241

Start: 1337018

End: 1337686

Strand: Reverse

Name: baeR [H]

Synonym: Sama_1104

Alternate gene names: 119774241

Gene position: 1337686-1337018 (Counterclockwise)

Preceding gene: 119774242

Following gene: 119774240

Centisome position: 31.06

GC content: 53.06

Gene sequence:

>669_bases
ATGACCCATAAGGTGTTTATCGTAGAAGATGAAAAGAACATCGCCGAAGTGATGCAGATGTATTTGCAGGCCGAAGGTCT
GGAAACCCGTGTATTTCATGACGGCAGCGACGTGGTCGAGGCAGTGAAAAACGAGACGCCCAGTTTGATGCTGCTCGATT
TGATGCTGCCGGGTAAGGATGGCCTGAGTATTTGCCAGGAACTCAGAGTCTTTTCAGAGCTTTACATCATTATGACCACC
GCCAGGGTAGAAGAGGTGGACCGCCTGCTGGGGCTTGATACCGGCGCAGATGACTATGTGTGCAAACCCTACAGTGCCCG
AGAGCTGACTGCCCGGGTGCGGGCTGTGCTTCGCCGGCTCGACGGCAAACTCACTGCCGCGGGCACCAGCCTCAAGGTAG
ATGAATCAGGTTTGTCCATAAGCTTTGGCGGCCAAACTGTCGTTCTGACGGCGCTGGAGTTCAGGCTGTTTAACCTGCTC
TACAGCCAGCCAAACCGTATTTATTCCCGCAGCCAGATTTTGGATTTGCTCTACAGTGACTTCAGGGTGTTGTCGGACCG
GACAGTGGACAGCCATATTCGCAACCTGCGTAAAAAGCTCACCGGCCTTAATACAGAGCAGGAGATGATCCGCTCTATCT
ATGGCCTGGGTTATCGTTTCGAAGGCTAA

Upstream 100 bases:

>100_bases
CCCATATCGGCCAAGCAGCCCTCTTTGCCTGCCACTGGGTCCATAACCGATGCGTCTCAGCACAGCGCTTAACACAGCTT
ACAGGTGATAAAAGACCGCC

Downstream 100 bases:

>100_bases
AAGACCCTGCAGCCATTAACGCAATCCAGCCGTGCCCCAAAAAACTGCATAATTGCTGCACAATCCTGTGGTCTTATTTG
GCGTAACGGCAAGGTCTCAG

Product: response regulator receiver protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 222; Mature: 221

Protein sequence:

>222_residues
MTHKVFIVEDEKNIAEVMQMYLQAEGLETRVFHDGSDVVEAVKNETPSLMLLDLMLPGKDGLSICQELRVFSELYIIMTT
ARVEEVDRLLGLDTGADDYVCKPYSARELTARVRAVLRRLDGKLTAAGTSLKVDESGLSISFGGQTVVLTALEFRLFNLL
YSQPNRIYSRSQILDLLYSDFRVLSDRTVDSHIRNLRKKLTGLNTEQEMIRSIYGLGYRFEG

Sequences:

>Translated_222_residues
MTHKVFIVEDEKNIAEVMQMYLQAEGLETRVFHDGSDVVEAVKNETPSLMLLDLMLPGKDGLSICQELRVFSELYIIMTT
ARVEEVDRLLGLDTGADDYVCKPYSARELTARVRAVLRRLDGKLTAAGTSLKVDESGLSISFGGQTVVLTALEFRLFNLL
YSQPNRIYSRSQILDLLYSDFRVLSDRTVDSHIRNLRKKLTGLNTEQEMIRSIYGLGYRFEG
>Mature_221_residues
THKVFIVEDEKNIAEVMQMYLQAEGLETRVFHDGSDVVEAVKNETPSLMLLDLMLPGKDGLSICQELRVFSELYIIMTTA
RVEEVDRLLGLDTGADDYVCKPYSARELTARVRAVLRRLDGKLTAAGTSLKVDESGLSISFGGQTVVLTALEFRLFNLLY
SQPNRIYSRSQILDLLYSDFRVLSDRTVDSHIRNLRKKLTGLNTEQEMIRSIYGLGYRFEG

Specific function: Member of the two-component regulatory system BaeS/BaeR. Activates the mdtABCD operon [H]

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 response regulatory domain [H]

Homologues:

Organism=Escherichia coli, GI1788394, Length=225, Percent_Identity=47.1111111111111, Blast_Score=229, Evalue=1e-61,
Organism=Escherichia coli, GI1790860, Length=223, Percent_Identity=39.9103139013453, Blast_Score=170, Evalue=7e-44,
Organism=Escherichia coli, GI1786599, Length=226, Percent_Identity=35.8407079646018, Blast_Score=150, Evalue=5e-38,
Organism=Escherichia coli, GI1789809, Length=234, Percent_Identity=35.042735042735, Blast_Score=141, Evalue=4e-35,
Organism=Escherichia coli, GI2367329, Length=226, Percent_Identity=34.5132743362832, Blast_Score=122, Evalue=2e-29,
Organism=Escherichia coli, GI1790863, Length=233, Percent_Identity=33.4763948497854, Blast_Score=121, Evalue=4e-29,
Organism=Escherichia coli, GI1787229, Length=231, Percent_Identity=35.4978354978355, Blast_Score=117, Evalue=8e-28,
Organism=Escherichia coli, GI87082012, Length=220, Percent_Identity=36.3636363636364, Blast_Score=115, Evalue=2e-27,
Organism=Escherichia coli, GI1786911, Length=230, Percent_Identity=34.3478260869565, Blast_Score=112, Evalue=1e-26,
Organism=Escherichia coli, GI1789402, Length=218, Percent_Identity=30.2752293577982, Blast_Score=105, Evalue=3e-24,
Organism=Escherichia coli, GI1787375, Length=222, Percent_Identity=31.0810810810811, Blast_Score=100, Evalue=7e-23,
Organism=Escherichia coli, GI1790552, Length=218, Percent_Identity=30.7339449541284, Blast_Score=94, Evalue=7e-21,
Organism=Escherichia coli, GI1786784, Length=225, Percent_Identity=30.6666666666667, Blast_Score=88, Evalue=4e-19,
Organism=Escherichia coli, GI145693140, Length=236, Percent_Identity=28.3898305084746, Blast_Score=85, Evalue=3e-18,
Organism=Escherichia coli, GI1790299, Length=114, Percent_Identity=32.4561403508772, Blast_Score=66, Evalue=2e-12,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR011006
- InterPro:   IPR001867
- InterPro:   IPR016032
- InterPro:   IPR001789
- InterPro:   IPR011991 [H]

Pfam domain/function: PF00072 Response_reg; PF00486 Trans_reg_C [H]

EC number: NA

Molecular weight: Translated: 25153; Mature: 25022

Theoretical pI: Translated: 5.17; Mature: 5.17

Prosite motif: PS50110 RESPONSE_REGULATORY

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.9 %Cys     (Translated Protein)
3.2 %Met     (Translated Protein)
4.1 %Cys+Met (Translated Protein)
0.9 %Cys     (Mature Protein)
2.7 %Met     (Mature Protein)
3.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTHKVFIVEDEKNIAEVMQMYLQAEGLETRVFHDGSDVVEAVKNETPSLMLLDLMLPGKD
CCCEEEEEECCCCHHHHHHHHHHHCCCCEEEEECCHHHHHHHHCCCCCEEEEEEECCCCC
GLSICQELRVFSELYIIMTTARVEEVDRLLGLDTGADDYVCKPYSARELTARVRAVLRRL
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCEECCCCHHHHHHHHHHHHHHH
DGKLTAAGTSLKVDESGLSISFGGQTVVLTALEFRLFNLLYSQPNRIYSRSQILDLLYSD
CCCEEECCCEEEEECCCCEEEECCCEEEHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHH
FRVLSDRTVDSHIRNLRKKLTGLNTEQEMIRSIYGLGYRFEG
HHHHHCCCHHHHHHHHHHHHCCCCHHHHHHHHHHCCCCEECC
>Mature Secondary Structure 
THKVFIVEDEKNIAEVMQMYLQAEGLETRVFHDGSDVVEAVKNETPSLMLLDLMLPGKD
CCEEEEEECCCCHHHHHHHHHHHCCCCEEEEECCHHHHHHHHCCCCCEEEEEEECCCCC
GLSICQELRVFSELYIIMTTARVEEVDRLLGLDTGADDYVCKPYSARELTARVRAVLRRL
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCEECCCCHHHHHHHHHHHHHHH
DGKLTAAGTSLKVDESGLSISFGGQTVVLTALEFRLFNLLYSQPNRIYSRSQILDLLYSD
CCCEEECCCEEEEECCCCEEEECCCEEEHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHH
FRVLSDRTVDSHIRNLRKKLTGLNTEQEMIRSIYGLGYRFEG
HHHHHCCCHHHHHHHHHHHHCCCCHHHHHHHHHHCCCCEECC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 12471157 [H]