Definition Shewanella amazonensis SB2B chromosome, complete genome.
Accession NC_008700
Length 4,306,142

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The map label for this gene is 119774234

Identifier: 119774234

GI number: 119774234

Start: 1322396

End: 1322707

Strand: Reverse

Name: 119774234

Synonym: Sama_1097

Alternate gene names: NA

Gene position: 1322707-1322396 (Counterclockwise)

Preceding gene: 119774239

Following gene: 119774232

Centisome position: 30.72

GC content: 52.56

Gene sequence:

>312_bases
TTGTCACAAGACAGGCGTTTACGGTCATGGGCCAACAGACTGTCACCGCCCTGCCCTTATGGCTATAATGGCTGGCAGTA
CCAACTTAAGCAGAATGCCATGACCGATTTCAGCACTATCAATAAATCCAGCAGTCAATCTTTTAACGCCCAGAAACGAC
TCATAAAAGATTTGCTCGCTGGCAAGACCATCCCATGCAGCCACTGTGGCAAGCCCCTGGCTGCCAGCCTACCGGCTGCC
GGTGAAACCCATCTGCTCGGTCATATCCGCTGCCCCAAGGGCTGTACCGACATTGAGCTTGAGGTAGAGTAA

Upstream 100 bases:

>100_bases
TTCTGGAGATTTGTTTCATTATCAATTCCTCCCTGATGCTATCGACTCAGGACAGTTTCGCAGGTGAGTTTCCATTTATT
ACCGGGTAAACGCTCCAAAC

Downstream 100 bases:

>100_bases
CCTCAGTCAAGCGCCAACAGTTGCCCCTGAGGGTTTATCTCAAACCGGCGCAGTTCCAATAAACCGGGTGTCTCGGCCAT
GGCCTGATTGGCATCCCGGA

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 103; Mature: 102

Protein sequence:

>103_residues
MSQDRRLRSWANRLSPPCPYGYNGWQYQLKQNAMTDFSTINKSSSQSFNAQKRLIKDLLAGKTIPCSHCGKPLAASLPAA
GETHLLGHIRCPKGCTDIELEVE

Sequences:

>Translated_103_residues
MSQDRRLRSWANRLSPPCPYGYNGWQYQLKQNAMTDFSTINKSSSQSFNAQKRLIKDLLAGKTIPCSHCGKPLAASLPAA
GETHLLGHIRCPKGCTDIELEVE
>Mature_102_residues
SQDRRLRSWANRLSPPCPYGYNGWQYQLKQNAMTDFSTINKSSSQSFNAQKRLIKDLLAGKTIPCSHCGKPLAASLPAAG
ETHLLGHIRCPKGCTDIELEVE

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 11448; Mature: 11317

Theoretical pI: Translated: 9.05; Mature: 9.05

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

4.9 %Cys     (Translated Protein)
1.9 %Met     (Translated Protein)
6.8 %Cys+Met (Translated Protein)
4.9 %Cys     (Mature Protein)
1.0 %Met     (Mature Protein)
5.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSQDRRLRSWANRLSPPCPYGYNGWQYQLKQNAMTDFSTINKSSSQSFNAQKRLIKDLLA
CCCCHHHHHHHHHCCCCCCCCCCCEEEEECCCCHHHHHHHCCCCCCCCHHHHHHHHHHHC
GKTIPCSHCGKPLAASLPAAGETHLLGHIRCPKGCTDIELEVE
CCCCCHHHCCCCCCCCCCCCCCCEEEEEEECCCCCCCEEEEEC
>Mature Secondary Structure 
SQDRRLRSWANRLSPPCPYGYNGWQYQLKQNAMTDFSTINKSSSQSFNAQKRLIKDLLA
CCCHHHHHHHHHCCCCCCCCCCCEEEEECCCCHHHHHHHCCCCCCCCHHHHHHHHHHHC
GKTIPCSHCGKPLAASLPAAGETHLLGHIRCPKGCTDIELEVE
CCCCCHHHCCCCCCCCCCCCCCCEEEEEEECCCCCCCEEEEEC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA