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The map label for this gene is ppdD [C]

Identifier: 119774069

GI number: 119774069

Start: 1126945

End: 1127343

Strand: Direct

Name: ppdD [C]

Synonym: Sama_0932

Alternate gene names: 119774069

Gene position: 1126945-1127343 (Clockwise)

Preceding gene: 119774068

Following gene: 119774072

Centisome position: 26.17

GC content: 43.86

Gene sequence:

>399_bases
ATGAATAATAGTAGAAAATTGGGTTTTACGTTGATTGAGTTAATGATAACGGTTGCTATTGCTTCTATATTGGCGGCAAT
AGCGTATCCTTCATATGTTAACTATGTGACTAAAAGTGGTCGCTCTGAAGGTGTGGCAGCTGTTATGCGTGTTGCGAATT
TGCAGGAGCAGTATTATTTAGATAATCGTGCTTATGCGACCGATATGACGAAGTTAGGATTAAGTGCAAGTCCATTTGTT
ACAGAGAATGGTTATTATAGTGTGGCTTCGGCTGGGACGAGCTCTTTCACTATTACGGCAACTGCAGCAGGGACACAGGC
GAGTAGAGATTCGACATGCGGTACCATTACACTGACCTCGGCTGGTGTTAAGGGGCCCTCAGCGGAGTGTTGGAAATGA

Upstream 100 bases:

>100_bases
AGAATGGAGAGAATTGCAGCGGGACTGTGGATTTGGAGTCAGGTTTGACCACGAATAAGATTTATTACCACATTGATGAG
TAGCTGTGGGTAGAGTTGAA

Downstream 100 bases:

>100_bases
ATAAGATTATAGCGTCTGTATTATTGGCGGTATCCTTGTCTTGTATTACAGGTACAACTTATGCTGCCAAACAGGATTAT
AAGTGTTTTGTTCAGAGTCT

Product: type IV pilus biogenesis protein PilE

Products: NA

Alternate protein names: Methylation Site Containing Protein; Type IV Pilin; Type 4 Fimbrial Biogenesis Protein PilE; Fimbrial Protein Pilin; Type IV Pilus Assembly Protein PilE; Pilus Assembly Protein; Methylation; Type 4 Fimbrial Biogenesis Transmembrane Protein; Fimbrial Assembly Protein PilE; Prepilin Like Protein; Type IV Pilin PilE; Type 4 Fimbrial Biogenesis Signal Peptide Protein; Tfp Pilus Assembly Protein PilE-Like Protein; Fimbrial Protein; Type-4 Fimbrial Pilin-Like Transmembrane Protein; PilE Protein; Type-IV Pilin; Prepilin-Type Cleavage/Methylation; Pilus Assembly Protein PilE; Secretion Protein; Tfp Pilus Assembly Protein PilE; Type IV Fimbrial Biogenesis Protein; Type IV PilE-Like Pilus Assembly Protein; General Secretion Pathway Protein H; Type IV Pilin Pile Protein; Protein Involved In Methylation; Type IV Pilus Assembly Protein

Number of amino acids: Translated: 132; Mature: 132

Protein sequence:

>132_residues
MNNSRKLGFTLIELMITVAIASILAAIAYPSYVNYVTKSGRSEGVAAVMRVANLQEQYYLDNRAYATDMTKLGLSASPFV
TENGYYSVASAGTSSFTITATAAGTQASRDSTCGTITLTSAGVKGPSAECWK

Sequences:

>Translated_132_residues
MNNSRKLGFTLIELMITVAIASILAAIAYPSYVNYVTKSGRSEGVAAVMRVANLQEQYYLDNRAYATDMTKLGLSASPFV
TENGYYSVASAGTSSFTITATAAGTQASRDSTCGTITLTSAGVKGPSAECWK
>Mature_132_residues
MNNSRKLGFTLIELMITVAIASILAAIAYPSYVNYVTKSGRSEGVAAVMRVANLQEQYYLDNRAYATDMTKLGLSASPFV
TENGYYSVASAGTSSFTITATAAGTQASRDSTCGTITLTSAGVKGPSAECWK

Specific function: Not Yet Known. [C]

COG id: COG4968

COG function: function code NU; Tfp pilus assembly protein PilE

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 13902; Mature: 13902

Theoretical pI: Translated: 8.64; Mature: 8.64

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.5 %Cys     (Translated Protein)
3.0 %Met     (Translated Protein)
4.5 %Cys+Met (Translated Protein)
1.5 %Cys     (Mature Protein)
3.0 %Met     (Mature Protein)
4.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNNSRKLGFTLIELMITVAIASILAAIAYPSYVNYVTKSGRSEGVAAVMRVANLQEQYYL
CCCCCCHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHC
DNRAYATDMTKLGLSASPFVTENGYYSVASAGTSSFTITATAAGTQASRDSTCGTITLTS
CCCCHHHHHHHCCCCCCCEEECCCCEEEECCCCCCEEEEEECCCCCCCCCCCCCEEEEEC
AGVKGPSAECWK
CCCCCCCCCCCC
>Mature Secondary Structure
MNNSRKLGFTLIELMITVAIASILAAIAYPSYVNYVTKSGRSEGVAAVMRVANLQEQYYL
CCCCCCHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHC
DNRAYATDMTKLGLSASPFVTENGYYSVASAGTSSFTITATAAGTQASRDSTCGTITLTS
CCCCHHHHHHHCCCCCCCEEECCCCEEEECCCCCCEEEEEECCCCCCCCCCCCCEEEEEC
AGVKGPSAECWK
CCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA