Definition Shewanella amazonensis SB2B chromosome, complete genome.
Accession NC_008700
Length 4,306,142

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The map label for this gene is 119773975

Identifier: 119773975

GI number: 119773975

Start: 1022935

End: 1023120

Strand: Direct

Name: 119773975

Synonym: Sama_0838

Alternate gene names: NA

Gene position: 1022935-1023120 (Clockwise)

Preceding gene: 119773973

Following gene: 119773979

Centisome position: 23.76

GC content: 54.84

Gene sequence:

>186_bases
ATGCAATTTCTGCTGAAGAGCATATTGCTGCTGGGATCGCTGGCATGGCTGGTGGTCAGCGGCAAGACCTTGCTGGGCCT
CGGGGTGATGGAAAATCCTTCGATAATGAAGGAACACCTGTTTGTGGTGGCGCAGGTCGTGTTGGCACTCTTGATACTGC
GCAGTGTGGCTGGCAAACGCAGCTAG

Upstream 100 bases:

>100_bases
ATTGCAAATTGATGCTGTCAGATATTTGATTGTTTGATTTTTAAGCTGTACCTTGCGCGCCCATAGAGAGATTGAGGTCA
TTGATTGGGAGTCGCTGAAA

Downstream 100 bases:

>100_bases
CCTATTGCTTCGAACACATTGCCCCGCTGTTTGCTTCGAGCCTGTCTGGTTTGCTGTGATTCGAATCTAATGAAAAAGGA
CGCCGATAGCGTCCTTTCGT

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 61; Mature: 61

Protein sequence:

>61_residues
MQFLLKSILLLGSLAWLVVSGKTLLGLGVMENPSIMKEHLFVVAQVVLALLILRSVAGKRS

Sequences:

>Translated_61_residues
MQFLLKSILLLGSLAWLVVSGKTLLGLGVMENPSIMKEHLFVVAQVVLALLILRSVAGKRS
>Mature_61_residues
MQFLLKSILLLGSLAWLVVSGKTLLGLGVMENPSIMKEHLFVVAQVVLALLILRSVAGKRS

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 6603; Mature: 6603

Theoretical pI: Translated: 11.22; Mature: 11.22

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
4.9 %Met     (Translated Protein)
4.9 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
4.9 %Met     (Mature Protein)
4.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MQFLLKSILLLGSLAWLVVSGKTLLGLGVMENPSIMKEHLFVVAQVVLALLILRSVAGKR
CHHHHHHHHHHHHHHHHHHCCCHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCC
S
C
>Mature Secondary Structure
MQFLLKSILLLGSLAWLVVSGKTLLGLGVMENPSIMKEHLFVVAQVVLALLILRSVAGKR
CHHHHHHHHHHHHHHHHHHCCCHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCC
S
C

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA