Definition Shewanella amazonensis SB2B chromosome, complete genome.
Accession NC_008700
Length 4,306,142

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The map label for this gene is 119773870

Identifier: 119773870

GI number: 119773870

Start: 900898

End: 901779

Strand: Direct

Name: 119773870

Synonym: Sama_0732

Alternate gene names: NA

Gene position: 900898-901779 (Clockwise)

Preceding gene: 119773869

Following gene: 119773871

Centisome position: 20.92

GC content: 52.61

Gene sequence:

>882_bases
ATGCCGTGGCGACTGACACTGAATCTGCTGCTGTTGATGGCCTGTTGTGGCCTTAATGCGGCGCAGTTCAGTGGCAGTCT
ACAGGGCCATAAACAGCTGACTGTGGCGGGTAAGGAGGTGATTCTTTGTGAACTCGCCGAAATACCTTCCTGTCTTGCCA
GCCTTCCTGAAGAGGTGACAGCGCAATTACCTGCGGATATCCCGGCACTGTTGGGTTATCGCACTGCGCTGGTGACACCC
GTATCCCATCCCGCGATTGCCGGGGTGATTGTGATGGTGCCTGAGCGTGCACCCAGCCGCGAGAGTGCTATCGTCTCCGG
TGCTTTGCTGGAGCTGCCGTTGGCAGAACAATCCACCTTAACCCTGTGGCATGAGATTGGCCATTTGGAGGTCAGAGCTT
TGCAAGGCTCTGTGTTGCCGGATATCCTCAGTGTGCGCGAACAGGAATGGCTGGCCGATGCCTATCTTTATTGGCGGATT
GCCAAAGAGAAAGGCAGTCTCACTCTGGCCTGGCAGCAGTTTCATCGCCGTAATCTTCAGGCTATCAATGACGTCAACCA
GTTGTCCCATTGGAGCTCCCTTTACTTACTTCCTTTGCTGAACAGGTATGATGCCAAAGAACTGGCGTTATTCGCTGAAT
TTGGTGCTTTTTGTCAGGATTTTTATCCAAGCCTTCCCCAGTGGTCTGACGAAGAACTGCAGGAGTTCGCCAGCCTTTTG
CATAATCTTTTTCAATCCGGTAACACCCGGGATATGCCCCATTATATGTACTGGCGGAAACCTCAATTACGCCCCGTATT
GGCGCCTACGCTCGATTTGCTGATGGGGCCGAACAATGCCCATCAATGGCTCACCAGACAGCATATGTTAAGCAAAGGTT
AG

Upstream 100 bases:

>100_bases
GCGCCGAAGTGATTGCCAATGGTGGCCAGGTGAAGGTGCTTGGTTTTGAAGATGGGGTGTCGACCACAGCCATCATTCAG
AACATCATGAGCCGCCACTG

Downstream 100 bases:

>100_bases
TGATTTGGCATGGCGTTCTGTTTTTAGCTGAACACTGGCTGAACGAAAGTCAGATACTCTTATGAATGCCATTTTTCTGG
CAGTAATCCCTCTAATGCTT

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 293; Mature: 292

Protein sequence:

>293_residues
MPWRLTLNLLLLMACCGLNAAQFSGSLQGHKQLTVAGKEVILCELAEIPSCLASLPEEVTAQLPADIPALLGYRTALVTP
VSHPAIAGVIVMVPERAPSRESAIVSGALLELPLAEQSTLTLWHEIGHLEVRALQGSVLPDILSVREQEWLADAYLYWRI
AKEKGSLTLAWQQFHRRNLQAINDVNQLSHWSSLYLLPLLNRYDAKELALFAEFGAFCQDFYPSLPQWSDEELQEFASLL
HNLFQSGNTRDMPHYMYWRKPQLRPVLAPTLDLLMGPNNAHQWLTRQHMLSKG

Sequences:

>Translated_293_residues
MPWRLTLNLLLLMACCGLNAAQFSGSLQGHKQLTVAGKEVILCELAEIPSCLASLPEEVTAQLPADIPALLGYRTALVTP
VSHPAIAGVIVMVPERAPSRESAIVSGALLELPLAEQSTLTLWHEIGHLEVRALQGSVLPDILSVREQEWLADAYLYWRI
AKEKGSLTLAWQQFHRRNLQAINDVNQLSHWSSLYLLPLLNRYDAKELALFAEFGAFCQDFYPSLPQWSDEELQEFASLL
HNLFQSGNTRDMPHYMYWRKPQLRPVLAPTLDLLMGPNNAHQWLTRQHMLSKG
>Mature_292_residues
PWRLTLNLLLLMACCGLNAAQFSGSLQGHKQLTVAGKEVILCELAEIPSCLASLPEEVTAQLPADIPALLGYRTALVTPV
SHPAIAGVIVMVPERAPSRESAIVSGALLELPLAEQSTLTLWHEIGHLEVRALQGSVLPDILSVREQEWLADAYLYWRIA
KEKGSLTLAWQQFHRRNLQAINDVNQLSHWSSLYLLPLLNRYDAKELALFAEFGAFCQDFYPSLPQWSDEELQEFASLLH
NLFQSGNTRDMPHYMYWRKPQLRPVLAPTLDLLMGPNNAHQWLTRQHMLSKG

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 32966; Mature: 32834

Theoretical pI: Translated: 6.17; Mature: 6.17

Prosite motif: PS00013 PROKAR_LIPOPROTEIN

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.7 %Cys     (Translated Protein)
2.4 %Met     (Translated Protein)
4.1 %Cys+Met (Translated Protein)
1.7 %Cys     (Mature Protein)
2.1 %Met     (Mature Protein)
3.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MPWRLTLNLLLLMACCGLNAAQFSGSLQGHKQLTVAGKEVILCELAEIPSCLASLPEEVT
CCCCHHHHHHHHHHHHCCCHHHHCCCCCCCCEEEECCCCEEEHHHHHHHHHHHHCCHHHH
AQLPADIPALLGYRTALVTPVSHPAIAGVIVMVPERAPSRESAIVSGALLELPLAEQSTL
HHCCCCHHHHHHHHHHHCCCCCCHHHHEEEEEECCCCCCHHHHHHHHHHHCCCCCCCHHH
TLWHEIGHLEVRALQGSVLPDILSVREQEWLADAYLYWRIAKEKGSLTLAWQQFHRRNLQ
HHHHHHCCEEEEECCCCHHHHHHHHHHHHHHHHHHHHEEEECCCCCEEHHHHHHHHHHHH
AINDVNQLSHWSSLYLLPLLNRYDAKELALFAEFGAFCQDFYPSLPQWSDEELQEFASLL
HHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHH
HNLFQSGNTRDMPHYMYWRKPQLRPVLAPTLDLLMGPNNAHQWLTRQHMLSKG
HHHHHCCCCCCCCCHHHCCCCCCCCHHHHHHHHHCCCCHHHHHHHHHHHHCCC
>Mature Secondary Structure 
PWRLTLNLLLLMACCGLNAAQFSGSLQGHKQLTVAGKEVILCELAEIPSCLASLPEEVT
CCCHHHHHHHHHHHHCCCHHHHCCCCCCCCEEEECCCCEEEHHHHHHHHHHHHCCHHHH
AQLPADIPALLGYRTALVTPVSHPAIAGVIVMVPERAPSRESAIVSGALLELPLAEQSTL
HHCCCCHHHHHHHHHHHCCCCCCHHHHEEEEEECCCCCCHHHHHHHHHHHCCCCCCCHHH
TLWHEIGHLEVRALQGSVLPDILSVREQEWLADAYLYWRIAKEKGSLTLAWQQFHRRNLQ
HHHHHHCCEEEEECCCCHHHHHHHHHHHHHHHHHHHHEEEECCCCCEEHHHHHHHHHHHH
AINDVNQLSHWSSLYLLPLLNRYDAKELALFAEFGAFCQDFYPSLPQWSDEELQEFASLL
HHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHH
HNLFQSGNTRDMPHYMYWRKPQLRPVLAPTLDLLMGPNNAHQWLTRQHMLSKG
HHHHHCCCCCCCCCHHHCCCCCCCCHHHHHHHHHCCCCHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA