Definition Shewanella amazonensis SB2B chromosome, complete genome.
Accession NC_008700
Length 4,306,142

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The map label for this gene is 119773857

Identifier: 119773857

GI number: 119773857

Start: 884021

End: 884701

Strand: Direct

Name: 119773857

Synonym: Sama_0719

Alternate gene names: NA

Gene position: 884021-884701 (Clockwise)

Preceding gene: 119773856

Following gene: 119773858

Centisome position: 20.53

GC content: 58.3

Gene sequence:

>681_bases
ATGCACCTTCACAAAGATGCTCGGGGGCATTGGTATTTTCGCAGTGAACGTCAAAGCCAACGGGTGATATACGGTGCCAT
CGCGCTGGTGCCCATGGGGGCGTCGCTGTTTATGTCTTTGGTGCTTAAAGGCAACGAAGCGGTGATCTATGGGGTGTTTG
CCGCGCTCTTATCGCCAGTTGCCCTGGTACTGCTGGGTTACCGTGAGCATCTGGTGTTTGTGCCCGGCAATCTGATTAGA
AGACGCAGCTTTTGGGGACGCGGCGAGAAAGACGTTGAGCGCTGGCCCACAGGTTCTGTTTCCCTGGTGGCAGAGCCGTT
GGTGCAGCTCGACAAGGGGTGCTGGCTGTCGCTGGAGGCAGGAAAACGCCTGTCCCGTTACAGCATAGGTGAAGAGGCCG
AAACCCTGGCCCTGGCAAAGTGTCTGGGAGCGCAAACCGGTGCGGCGGCATGCGAGCGGATGAGTGATTATCCCCACGCC
CGCCCAATACAAGCTGCGGCTGACTTTGATAGCGAAACCGCACCAGACAAACATCCAAATGCAGCCGTGACGGCTGTTCC
GGCTCCACAATCCTCAGCGCAGGCGCCCTTCGCGACAGTACGCGGCTCGTTTTGGCGTGCTTTGTTGCCGCTGCCGATGT
TTATTGCACTGGGGACGCTGCTCTTATGGCTGGGCTACTGA

Upstream 100 bases:

>100_bases
AGGTTGATAAATGAAGAAACAAGCTCCATCCGATTCGATTGCACAATCCACGAGTGTCCTCAGGCAAGCTGACCTTCGCC
AGCTGGGACGGGGCGCGCGC

Downstream 100 bases:

>100_bases
TTTTGCTGATGAGAATTGATTTGAACAGGCGACTGAACCGATGAAGTGGATCAAGGAAAGCGACGCCCGTGGCAGTCTGG
TGCTGGGGAACCGGGTTGCA

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 226; Mature: 226

Protein sequence:

>226_residues
MHLHKDARGHWYFRSERQSQRVIYGAIALVPMGASLFMSLVLKGNEAVIYGVFAALLSPVALVLLGYREHLVFVPGNLIR
RRSFWGRGEKDVERWPTGSVSLVAEPLVQLDKGCWLSLEAGKRLSRYSIGEEAETLALAKCLGAQTGAAACERMSDYPHA
RPIQAAADFDSETAPDKHPNAAVTAVPAPQSSAQAPFATVRGSFWRALLPLPMFIALGTLLLWLGY

Sequences:

>Translated_226_residues
MHLHKDARGHWYFRSERQSQRVIYGAIALVPMGASLFMSLVLKGNEAVIYGVFAALLSPVALVLLGYREHLVFVPGNLIR
RRSFWGRGEKDVERWPTGSVSLVAEPLVQLDKGCWLSLEAGKRLSRYSIGEEAETLALAKCLGAQTGAAACERMSDYPHA
RPIQAAADFDSETAPDKHPNAAVTAVPAPQSSAQAPFATVRGSFWRALLPLPMFIALGTLLLWLGY
>Mature_226_residues
MHLHKDARGHWYFRSERQSQRVIYGAIALVPMGASLFMSLVLKGNEAVIYGVFAALLSPVALVLLGYREHLVFVPGNLIR
RRSFWGRGEKDVERWPTGSVSLVAEPLVQLDKGCWLSLEAGKRLSRYSIGEEAETLALAKCLGAQTGAAACERMSDYPHA
RPIQAAADFDSETAPDKHPNAAVTAVPAPQSSAQAPFATVRGSFWRALLPLPMFIALGTLLLWLGY

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 24732; Mature: 24732

Theoretical pI: Translated: 9.12; Mature: 9.12

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.3 %Cys     (Translated Protein)
2.2 %Met     (Translated Protein)
3.5 %Cys+Met (Translated Protein)
1.3 %Cys     (Mature Protein)
2.2 %Met     (Mature Protein)
3.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MHLHKDARGHWYFRSERQSQRVIYGAIALVPMGASLFMSLVLKGNEAVIYGVFAALLSPV
CCCCCCCCCCEEECCCCCCHHHHHHHHHHHHCCHHHHHHHHHCCCCCHHHHHHHHHHHHH
ALVLLGYREHLVFVPGNLIRRRSFWGRGEKDVERWPTGSVSLVAEPLVQLDKGCWLSLEA
HHHHHHHHHCEEECCCHHHHHHHHCCCCCHHHHHCCCCCHHHHHHHHHHHCCCCEEEECC
GKRLSRYSIGEEAETLALAKCLGAQTGAAACERMSDYPHARPIQAAADFDSETAPDKHPN
CCHHHHHCCCCHHHHHHHHHHHCCCCHHHHHHHHHCCCCCCCCHHHHCCCCCCCCCCCCC
AAVTAVPAPQSSAQAPFATVRGSFWRALLPLPMFIALGTLLLWLGY
CEEEEECCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC
>Mature Secondary Structure
MHLHKDARGHWYFRSERQSQRVIYGAIALVPMGASLFMSLVLKGNEAVIYGVFAALLSPV
CCCCCCCCCCEEECCCCCCHHHHHHHHHHHHCCHHHHHHHHHCCCCCHHHHHHHHHHHHH
ALVLLGYREHLVFVPGNLIRRRSFWGRGEKDVERWPTGSVSLVAEPLVQLDKGCWLSLEA
HHHHHHHHHCEEECCCHHHHHHHHCCCCCHHHHHCCCCCHHHHHHHHHHHCCCCEEEECC
GKRLSRYSIGEEAETLALAKCLGAQTGAAACERMSDYPHARPIQAAADFDSETAPDKHPN
CCHHHHHCCCCHHHHHHHHHHHCCCCHHHHHHHHHCCCCCCCCHHHHCCCCCCCCCCCCC
AAVTAVPAPQSSAQAPFATVRGSFWRALLPLPMFIALGTLLLWLGY
CEEEEECCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA