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The map label for this gene is glpD [H]

Identifier: 119773767

GI number: 119773767

Start: 781189

End: 782403

Strand: Direct

Name: glpD [H]

Synonym: Sama_0629

Alternate gene names: 119773767

Gene position: 781189-782403 (Clockwise)

Preceding gene: 119773766

Following gene: 119773768

Centisome position: 18.14

GC content: 57.28

Gene sequence:

>1215_bases
ATGAAGCGAGTGGACGTGCTGGTGGTGGGTGGCGGCATTGCTGGCGTGGGCATAGCCCAGTTTGCTGCTGCGGCCGGATA
TTCGGTGGCCTTGATTGAACGGCAGCGGATAGGTGAAGCGACCTCCGGCAATTCCAGCAAACTCATCCATGGCGGCCTGA
GATATCTGGAGACTATGCAGTTGGACCTTGTGCGTAAGTCGCTCAAAGAGAGACGCGCACTGCTACAGCTGGCGCCGTCT
CTGGTGACGGCCGTCCCCTTTTATTTTCCTGTGTATCGCAACAGTCGCCGTGGAGCACTCACTATCAGGGCGGGCTTGTC
CCTGTATGGGCTCTTAAGCGAGTTCGATGCCCTCGGCCGCTTTAAAACTCTGAGCAAGTCTCAGTGGTCCAGGTTACAGG
GATTAAACAGCGCCGGGCTTGAGACTGTGTTCCAATATTGGGATGCACAAACTGACGACAGGCTGCTGTGTGAGGCGGTG
GCGCACAGTGCAATCCTGCTCGGAACTGATGTGTTCGAATGGGCTGAAGTGGAACACATACAGCACAGTGGTGATGGCTG
TCAGGTGAGTTTTACACAGCAGGGACAGCAGCATGACATCCAGGCGGGTGTGGTCATTAACGCCTGCGGCCCCTGGGTGA
ATCAGCTGCTGGAGAGGGTGACTCCAACCGTATCGGCGCTGGAGATTGACTGGGTTCAGGGAGCGCACCTGCTGCTGGAC
ATACCGCCGGTCGACGGTGTGCTTTACCTTGAGTCCCCCATCGACCAGAGGGTGGTGTTTGTTATGCCCTGGTATGGCAA
AACCTTGGTCGGCACCACAGAAACCCGGTTGACCCATTTGGACAACAAGCCCGCCGTCACCGAAGCGGAGAAACGCTACC
TGTTGGCGCTCTACGCCCACTATTTCCCCGATGCCGGCAAAGTGGATGAGCTGGAGAAAAAAGTGACTGATACCTTTTGC
GGGGTCAGGGTGCTCCCCCGAAGTGGCGGTGATGCTTTTCACGCCCCGAGGGATACCCTGATGCACACTTGCCGCTCTCA
CCCAAGACTGCTGAGCCTTTACGGCGGTAAACTGACCACATTTCGCAGCAGTGCGGCCGAAGTGCTGGATTGGGTGAGGG
CACAACTGGGGGATAGAGCCGCGATTGCCGATGTGGATAAGCTGCCGCTGACCCGTCCGGTAAACCGGGATGATTTTATG
GCGCAAACAGGCTAA

Upstream 100 bases:

>100_bases
GACAGAATGCGCTGCATGGTGGGGACCGGGCTGGAAGAACTGGCCGAGCTGAAAAGATTGTGCGACAAAGCGGCCAAGTT
ATTGGAGCGGGAGTCCTAGC

Downstream 100 bases:

>100_bases
AGTGTGCGCCGTTTTTTAGATGTGGGAGCCGAACGTGAGCTGTGACTATTTCAACCGGGGACTCTGTCAGTCGTGTCGTC
TGATGTCCAAGCCAGTGACT

Product: glycerol-3-phosphate dehydrogenase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 404; Mature: 404

Protein sequence:

>404_residues
MKRVDVLVVGGGIAGVGIAQFAAAAGYSVALIERQRIGEATSGNSSKLIHGGLRYLETMQLDLVRKSLKERRALLQLAPS
LVTAVPFYFPVYRNSRRGALTIRAGLSLYGLLSEFDALGRFKTLSKSQWSRLQGLNSAGLETVFQYWDAQTDDRLLCEAV
AHSAILLGTDVFEWAEVEHIQHSGDGCQVSFTQQGQQHDIQAGVVINACGPWVNQLLERVTPTVSALEIDWVQGAHLLLD
IPPVDGVLYLESPIDQRVVFVMPWYGKTLVGTTETRLTHLDNKPAVTEAEKRYLLALYAHYFPDAGKVDELEKKVTDTFC
GVRVLPRSGGDAFHAPRDTLMHTCRSHPRLLSLYGGKLTTFRSSAAEVLDWVRAQLGDRAAIADVDKLPLTRPVNRDDFM
AQTG

Sequences:

>Translated_404_residues
MKRVDVLVVGGGIAGVGIAQFAAAAGYSVALIERQRIGEATSGNSSKLIHGGLRYLETMQLDLVRKSLKERRALLQLAPS
LVTAVPFYFPVYRNSRRGALTIRAGLSLYGLLSEFDALGRFKTLSKSQWSRLQGLNSAGLETVFQYWDAQTDDRLLCEAV
AHSAILLGTDVFEWAEVEHIQHSGDGCQVSFTQQGQQHDIQAGVVINACGPWVNQLLERVTPTVSALEIDWVQGAHLLLD
IPPVDGVLYLESPIDQRVVFVMPWYGKTLVGTTETRLTHLDNKPAVTEAEKRYLLALYAHYFPDAGKVDELEKKVTDTFC
GVRVLPRSGGDAFHAPRDTLMHTCRSHPRLLSLYGGKLTTFRSSAAEVLDWVRAQLGDRAAIADVDKLPLTRPVNRDDFM
AQTG
>Mature_404_residues
MKRVDVLVVGGGIAGVGIAQFAAAAGYSVALIERQRIGEATSGNSSKLIHGGLRYLETMQLDLVRKSLKERRALLQLAPS
LVTAVPFYFPVYRNSRRGALTIRAGLSLYGLLSEFDALGRFKTLSKSQWSRLQGLNSAGLETVFQYWDAQTDDRLLCEAV
AHSAILLGTDVFEWAEVEHIQHSGDGCQVSFTQQGQQHDIQAGVVINACGPWVNQLLERVTPTVSALEIDWVQGAHLLLD
IPPVDGVLYLESPIDQRVVFVMPWYGKTLVGTTETRLTHLDNKPAVTEAEKRYLLALYAHYFPDAGKVDELEKKVTDTFC
GVRVLPRSGGDAFHAPRDTLMHTCRSHPRLLSLYGGKLTTFRSSAAEVLDWVRAQLGDRAAIADVDKLPLTRPVNRDDFM
AQTG

Specific function: Conversion Of Glycerol 3-Phosphate To Dihydroxyacetone. Uses Molecular Oxygen Or Nitrate As Electron Acceptor. [C]

COG id: COG0578

COG function: function code C; Glycerol-3-phosphate dehydrogenase

Gene ontology:

Cell location: Cytoplasm [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the FAD-dependent glycerol-3-phosphate dehydrogenase family [H]

Homologues:

Organism=Homo sapiens, GI285002233, Length=390, Percent_Identity=30.2564102564103, Blast_Score=139, Evalue=6e-33,
Organism=Homo sapiens, GI285002231, Length=390, Percent_Identity=30.2564102564103, Blast_Score=139, Evalue=6e-33,
Organism=Escherichia coli, GI2367226, Length=353, Percent_Identity=32.2946175637394, Blast_Score=142, Evalue=4e-35,
Organism=Caenorhabditis elegans, GI115534726, Length=386, Percent_Identity=30.3108808290155, Blast_Score=123, Evalue=2e-28,
Organism=Caenorhabditis elegans, GI17509253, Length=384, Percent_Identity=29.6875, Blast_Score=115, Evalue=6e-26,
Organism=Saccharomyces cerevisiae, GI6322036, Length=401, Percent_Identity=29.426433915212, Blast_Score=126, Evalue=7e-30,
Organism=Drosophila melanogaster, GI161077125, Length=399, Percent_Identity=29.5739348370927, Blast_Score=125, Evalue=8e-29,
Organism=Drosophila melanogaster, GI24653942, Length=399, Percent_Identity=29.5739348370927, Blast_Score=125, Evalue=8e-29,
Organism=Drosophila melanogaster, GI24653944, Length=399, Percent_Identity=29.5739348370927, Blast_Score=125, Evalue=8e-29,
Organism=Drosophila melanogaster, GI20130025, Length=399, Percent_Identity=29.5739348370927, Blast_Score=125, Evalue=8e-29,
Organism=Drosophila melanogaster, GI24586295, Length=389, Percent_Identity=29.305912596401, Blast_Score=105, Evalue=4e-23,
Organism=Drosophila melanogaster, GI19921278, Length=220, Percent_Identity=30.9090909090909, Blast_Score=69, Evalue=8e-12,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR006076
- InterPro:   IPR000447 [H]

Pfam domain/function: PF01266 DAO [H]

EC number: =1.1.5.3 [H]

Molecular weight: Translated: 44529; Mature: 44529

Theoretical pI: Translated: 7.10; Mature: 7.10

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.2 %Cys     (Translated Protein)
1.2 %Met     (Translated Protein)
2.5 %Cys+Met (Translated Protein)
1.2 %Cys     (Mature Protein)
1.2 %Met     (Mature Protein)
2.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKRVDVLVVGGGIAGVGIAQFAAAAGYSVALIERQRIGEATSGNSSKLIHGGLRYLETMQ
CCCEEEEEECCCCHHHHHHHHHHHCCCEEEEEEHHHCCCCCCCCCCHHHHHHHHHHHHHH
LDLVRKSLKERRALLQLAPSLVTAVPFYFPVYRNSRRGALTIRAGLSLYGLLSEFDALGR
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEECCCCCEEEEECCHHHHHHHHHHHHHHH
FKTLSKSQWSRLQGLNSAGLETVFQYWDAQTDDRLLCEAVAHSAILLGTDVFEWAEVEHI
HHHHHHHHHHHHHCCCHHHHHHHHHHHCCCCCHHHHHHHHHHCEEEECCCHHHHHHHHHH
QHSGDGCQVSFTQQGQQHDIQAGVVINACGPWVNQLLERVTPTVSALEIDWVQGAHLLLD
HCCCCCCEEEECCCCCCCCCEECEEEECCCHHHHHHHHHHCCCHHEEEEEEECCCEEEEE
IPPVDGVLYLESPIDQRVVFVMPWYGKTLVGTTETRLTHLDNKPAVTEAEKRYLLALYAH
CCCCCCEEEECCCCCCCEEEEECCCCCEEECCCHHHHEECCCCCCCCHHHHHHHHHHHHH
YFPDAGKVDELEKKVTDTFCGVRVLPRSGGDAFHAPRDTLMHTCRSHPRLLSLYGGKLTT
HCCCCCCHHHHHHHHHHHHCCEEEEECCCCCCCCCCHHHHHHHHHCCCCEEECCCCEEEH
FRSSAAEVLDWVRAQLGDRAAIADVDKLPLTRPVNRDDFMAQTG
HHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCC
>Mature Secondary Structure
MKRVDVLVVGGGIAGVGIAQFAAAAGYSVALIERQRIGEATSGNSSKLIHGGLRYLETMQ
CCCEEEEEECCCCHHHHHHHHHHHCCCEEEEEEHHHCCCCCCCCCCHHHHHHHHHHHHHH
LDLVRKSLKERRALLQLAPSLVTAVPFYFPVYRNSRRGALTIRAGLSLYGLLSEFDALGR
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEECCCCCEEEEECCHHHHHHHHHHHHHHH
FKTLSKSQWSRLQGLNSAGLETVFQYWDAQTDDRLLCEAVAHSAILLGTDVFEWAEVEHI
HHHHHHHHHHHHHCCCHHHHHHHHHHHCCCCCHHHHHHHHHHCEEEECCCHHHHHHHHHH
QHSGDGCQVSFTQQGQQHDIQAGVVINACGPWVNQLLERVTPTVSALEIDWVQGAHLLLD
HCCCCCCEEEECCCCCCCCCEECEEEECCCHHHHHHHHHHCCCHHEEEEEEECCCEEEEE
IPPVDGVLYLESPIDQRVVFVMPWYGKTLVGTTETRLTHLDNKPAVTEAEKRYLLALYAH
CCCCCCEEEECCCCCCCEEEEECCCCCEEECCCHHHHEECCCCCCCCHHHHHHHHHHHHH
YFPDAGKVDELEKKVTDTFCGVRVLPRSGGDAFHAPRDTLMHTCRSHPRLLSLYGGKLTT
HCCCCCCHHHHHHHHHHHHCCEEEEECCCCCCCCCCHHHHHHHHHCCCCEEECCCCEEEH
FRSSAAEVLDWVRAQLGDRAAIADVDKLPLTRPVNRDDFMAQTG
HHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 8905231 [H]