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The map label for this gene is yajR [H]

Identifier: 119773655

GI number: 119773655

Start: 634698

End: 636065

Strand: Direct

Name: yajR [H]

Synonym: Sama_0515

Alternate gene names: 119773655

Gene position: 634698-636065 (Clockwise)

Preceding gene: 119773651

Following gene: 119773656

Centisome position: 14.74

GC content: 56.43

Gene sequence:

>1368_bases
ATGGCTAACAGCGGTCTTTCGGCCACCGAGAAAAAAGTCGCCTTTTCACTGGCCAGCGTATTCGGCCTGCGGATGATGGG
TCTGTTTATGATCATGCCGGTGTTTGCCCTTTACGGCCAACATCTCGAAGGTTTCTCGCCTCTGTGGGTGGGTATAGCCA
TTGGTGCCTATGGTTTAACCCAGGCGCTGCTGCAAATCCCCATGGGTATTCTGTCGGACAAATTTGGCCGCAAGCCAATT
ATTCTTATCGGCTTGTTGGTGTTTGCCGTGGGCAGTGTGGTCGCCGCCATGGCCGACAGCATCTATGGGGTAGTCTTCGG
CCGGGCATTGCAGGGCATGGGGGCCATTGCCGCCGCAGTGCTGGCGCTGGCCGCCGATCTGACCCGTGACGAGCAGCGCA
CCAAGGTCATGGCCATTATCGGCATGTGTATTGGTTTCTCATTTGCGCTGTCATTGCTGGTGGGCCCGGTGGTGGCGCAG
CATATGGGGCTTTCGGGGCTCTTTGCCCTCACTGCGGGTTTGGCGCTCTTGGGCATCTTGATAGTGCAACTGCTGGTACC
AAACCCAGTGCATCAGGCGCCCAAGGGCGATACGCTGGCGGCGCCTGCCAAACTGATGCGGATGCTCAAAGACCCGCAGC
TGTTCCGCCTCGATGCCGGTATCTTTATTTTGCACCTGGTGCTGACGGCCGTATTTGTGGCATTGCCGCTGGATTTGGTG
GATGCAGGTCTTGCCAAAGAAAAGCACTGGATGCTGTACTTCCCCGCTTTTATCGGTGCCTTTTTCTTGATGGTGCCGCT
TATCATCATCGGCGTGAAGCGTAAGAACACCAAGGGCATGTTCCAGGTGGCACTGGTGATCATGATGCTGGCCCTCGCTG
TGATGGCGCTGTTTGCCGATAATCTGTGGCTGCTGGCCTTTGCGGTGTTGCTGTTTTTTACCGGTTTTAACTACCTTGAA
GCCTCGCTGCCCAGCCTGATTGCCAAGTTTTGCCCCGTGGGTGAAAAGGGCTCGGCCATGGGCGTGTATTCCACCAGTCA
GTTCCTCGGTGCCTTCTGCGGTGGTCTTTTGGGCGGCGGCGCCTTCCAATTGCTGGGGGCGGCGGGTGTGTTCGTCGCGG
CGCTCGGTTTGATGGCGCTTTGGCTGGTGCTTTCTCTGGGGATGAAGAACCCTGTGCTGCTCAAGAGCTACACCCTGGAA
GCGCAGGTAGAAGGCAGGGAACAGGCCCGTGAAATGGCCAGCAGGCTGTCGCAATTGGCCGGTGTAGCCGAAGCCATTGT
GGTGCTTGAAGAAAAAGTTGCTTACCTCAAAGTGGATGAGCAATTCGATTTAAGAGAAGCCAGAGCTGTGTTAGGCTCTG
CAAATTAA

Upstream 100 bases:

>100_bases
ACTTCCGGCATCTCAATCGCCGGAGCGCCAACTTGGGGGAGTGTGGCCGCTGTGCTACCATTCGCGCCCCCGGTGCATTC
TTGAATCAAGGTTTTCAGTC

Downstream 100 bases:

>100_bases
CTCTGTTTTATACGCAAAATTTCGGGAGAGATTGAATGGCCAGTCGTGGTGTGAATAAAGTGATTCTGGTAGGTAACCTG
GGGCAAGACCCTGAGGTGCG

Product: transporter

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 455; Mature: 454

Protein sequence:

>455_residues
MANSGLSATEKKVAFSLASVFGLRMMGLFMIMPVFALYGQHLEGFSPLWVGIAIGAYGLTQALLQIPMGILSDKFGRKPI
ILIGLLVFAVGSVVAAMADSIYGVVFGRALQGMGAIAAAVLALAADLTRDEQRTKVMAIIGMCIGFSFALSLLVGPVVAQ
HMGLSGLFALTAGLALLGILIVQLLVPNPVHQAPKGDTLAAPAKLMRMLKDPQLFRLDAGIFILHLVLTAVFVALPLDLV
DAGLAKEKHWMLYFPAFIGAFFLMVPLIIIGVKRKNTKGMFQVALVIMMLALAVMALFADNLWLLAFAVLLFFTGFNYLE
ASLPSLIAKFCPVGEKGSAMGVYSTSQFLGAFCGGLLGGGAFQLLGAAGVFVAALGLMALWLVLSLGMKNPVLLKSYTLE
AQVEGREQAREMASRLSQLAGVAEAIVVLEEKVAYLKVDEQFDLREARAVLGSAN

Sequences:

>Translated_455_residues
MANSGLSATEKKVAFSLASVFGLRMMGLFMIMPVFALYGQHLEGFSPLWVGIAIGAYGLTQALLQIPMGILSDKFGRKPI
ILIGLLVFAVGSVVAAMADSIYGVVFGRALQGMGAIAAAVLALAADLTRDEQRTKVMAIIGMCIGFSFALSLLVGPVVAQ
HMGLSGLFALTAGLALLGILIVQLLVPNPVHQAPKGDTLAAPAKLMRMLKDPQLFRLDAGIFILHLVLTAVFVALPLDLV
DAGLAKEKHWMLYFPAFIGAFFLMVPLIIIGVKRKNTKGMFQVALVIMMLALAVMALFADNLWLLAFAVLLFFTGFNYLE
ASLPSLIAKFCPVGEKGSAMGVYSTSQFLGAFCGGLLGGGAFQLLGAAGVFVAALGLMALWLVLSLGMKNPVLLKSYTLE
AQVEGREQAREMASRLSQLAGVAEAIVVLEEKVAYLKVDEQFDLREARAVLGSAN
>Mature_454_residues
ANSGLSATEKKVAFSLASVFGLRMMGLFMIMPVFALYGQHLEGFSPLWVGIAIGAYGLTQALLQIPMGILSDKFGRKPII
LIGLLVFAVGSVVAAMADSIYGVVFGRALQGMGAIAAAVLALAADLTRDEQRTKVMAIIGMCIGFSFALSLLVGPVVAQH
MGLSGLFALTAGLALLGILIVQLLVPNPVHQAPKGDTLAAPAKLMRMLKDPQLFRLDAGIFILHLVLTAVFVALPLDLVD
AGLAKEKHWMLYFPAFIGAFFLMVPLIIIGVKRKNTKGMFQVALVIMMLALAVMALFADNLWLLAFAVLLFFTGFNYLEA
SLPSLIAKFCPVGEKGSAMGVYSTSQFLGAFCGGLLGGGAFQLLGAAGVFVAALGLMALWLVLSLGMKNPVLLKSYTLEA
QVEGREQAREMASRLSQLAGVAEAIVVLEEKVAYLKVDEQFDLREARAVLGSAN

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cell inner membrane; Multi-pass membrane protein [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the major facilitator superfamily [H]

Homologues:

Organism=Escherichia coli, GI87081738, Length=447, Percent_Identity=42.9530201342282, Blast_Score=355, Evalue=4e-99,
Organism=Escherichia coli, GI48994889, Length=137, Percent_Identity=32.1167883211679, Blast_Score=62, Evalue=6e-11,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR020846
- InterPro:   IPR011701
- InterPro:   IPR016196 [H]

Pfam domain/function: PF07690 MFS_1 [H]

EC number: NA

Molecular weight: Translated: 48291; Mature: 48160

Theoretical pI: Translated: 9.28; Mature: 9.28

Prosite motif: PS50850 MFS ; PS00216 SUGAR_TRANSPORT_1

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.7 %Cys     (Translated Protein)
5.1 %Met     (Translated Protein)
5.7 %Cys+Met (Translated Protein)
0.7 %Cys     (Mature Protein)
4.8 %Met     (Mature Protein)
5.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure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HHHHHHHHHHHHHHHEEECCCCCHHHHHHHHCCCC
>Mature Secondary Structure 
ANSGLSATEKKVAFSLASVFGLRMMGLFMIMPVFALYGQHLEGFSPLWVGIAIGAYGLT
CCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHH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HHHHHHHHHHHHHHHEEECCCCCHHHHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 9278503 [H]