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The map label for this gene is mreD [H]

Identifier: 119773609

GI number: 119773609

Start: 575203

End: 575691

Strand: Direct

Name: mreD [H]

Synonym: Sama_0469

Alternate gene names: 119773609

Gene position: 575203-575691 (Clockwise)

Preceding gene: 119773608

Following gene: 119773610

Centisome position: 13.36

GC content: 55.42

Gene sequence:

>489_bases
ATGAGTCTGCAGGCCCCCAATCGTCGCATCGTGGTCTGGCTAACCCTGTTTGTCGGCTTGTTGTTTCAAATCATGCCGCT
GCCTGATCTGGTTGCCGCCTGGCGTCCGGACTGGCTGCTGCTGGTGCTCATCTACTGGACCATGGCTTTGCCCCATAGAT
ACAACATCCTGACCGCCTGGATTTTGGGGGTGGTATTGGATGTATTGCTGGGCGCGACCCTCGGCGTCAGGGCGCTGGCT
TTTTCATTGGTGATTTACGTGGTGGCACTGCATTTTCAGCGTATGCGTAACTTCACTATCTGGCAGCAGTCTTTGTTGGT
TGCATCCCTGGTAGGGGTGTTTCATCTGGTGGTGTACTGGCTGCAGTACGTGCTGACCAAGGCCACTTACTCCCACGCCA
TCTTCTGGCCTGTGTTGTCCAGCCTCGTTATCTGGCCCTGGGTGTTCTGGTTCCTGCGTCGGGTGCGTCGCCGTTATAAA
GTGAGATAA

Upstream 100 bases:

>100_bases
ATACCGAAGCCGTTGAGGGCACCACCGTCGATGACGTCAATGCGCCGGCCCAGAATGAGCCTGCCACAGAGGCTGTTCCA
ACCGCCGCTGAGGAGGCCCA

Downstream 100 bases:

>100_bases
ATTTCATGACTCTGGTGCTGGCATCCCAGTCACCCCGTCGCCGTGAGCTTCTTGCTCAGGCTGGTTTGGGTGTAGCGGGA
TTTTCCTTTGAGCGCGTTAA

Product: rod shape-determining protein MreD

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 162; Mature: 161

Protein sequence:

>162_residues
MSLQAPNRRIVVWLTLFVGLLFQIMPLPDLVAAWRPDWLLLVLIYWTMALPHRYNILTAWILGVVLDVLLGATLGVRALA
FSLVIYVVALHFQRMRNFTIWQQSLLVASLVGVFHLVVYWLQYVLTKATYSHAIFWPVLSSLVIWPWVFWFLRRVRRRYK
VR

Sequences:

>Translated_162_residues
MSLQAPNRRIVVWLTLFVGLLFQIMPLPDLVAAWRPDWLLLVLIYWTMALPHRYNILTAWILGVVLDVLLGATLGVRALA
FSLVIYVVALHFQRMRNFTIWQQSLLVASLVGVFHLVVYWLQYVLTKATYSHAIFWPVLSSLVIWPWVFWFLRRVRRRYK
VR
>Mature_161_residues
SLQAPNRRIVVWLTLFVGLLFQIMPLPDLVAAWRPDWLLLVLIYWTMALPHRYNILTAWILGVVLDVLLGATLGVRALAF
SLVIYVVALHFQRMRNFTIWQQSLLVASLVGVFHLVVYWLQYVLTKATYSHAIFWPVLSSLVIWPWVFWFLRRVRRRYKV
R

Specific function: Involved in formation of the rod shape of the cell. May also contribute to regulation of formation of penicillin-binding proteins [H]

COG id: COG2891

COG function: function code M; Cell shape-determining protein

Gene ontology:

Cell location: Cell inner membrane; Multi-pass membrane protein [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the mreD family [H]

Homologues:

Organism=Escherichia coli, GI1789647, Length=154, Percent_Identity=42.8571428571429, Blast_Score=142, Evalue=2e-35,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR007227 [H]

Pfam domain/function: PF04093 MreD [H]

EC number: NA

Molecular weight: Translated: 19179; Mature: 19047

Theoretical pI: Translated: 11.83; Mature: 11.83

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
2.5 %Met     (Translated Protein)
2.5 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
1.9 %Met     (Mature Protein)
1.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSLQAPNRRIVVWLTLFVGLLFQIMPLPDLVAAWRPDWLLLVLIYWTMALPHRYNILTAW
CCCCCCCCHHHHHHHHHHHHHHHHHCCHHHHHHHCCHHHHHHHHHHHHHCCCHHHHHHHH
ILGVVLDVLLGATLGVRALAFSLVIYVVALHFQRMRNFTIWQQSLLVASLVGVFHLVVYW
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
LQYVLTKATYSHAIFWPVLSSLVIWPWVFWFLRRVRRRYKVR
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC
>Mature Secondary Structure 
SLQAPNRRIVVWLTLFVGLLFQIMPLPDLVAAWRPDWLLLVLIYWTMALPHRYNILTAW
CCCCCCCHHHHHHHHHHHHHHHHHCCHHHHHHHCCHHHHHHHHHHHHHCCCHHHHHHHH
ILGVVLDVLLGATLGVRALAFSLVIYVVALHFQRMRNFTIWQQSLLVASLVGVFHLVVYW
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
LQYVLTKATYSHAIFWPVLSSLVIWPWVFWFLRRVRRRYKVR
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 11206551; 11258796 [H]