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The map label for this gene is 119773605

Identifier: 119773605

GI number: 119773605

Start: 569932

End: 570351

Strand: Direct

Name: 119773605

Synonym: Sama_0465

Alternate gene names: NA

Gene position: 569932-570351 (Clockwise)

Preceding gene: 119773604

Following gene: 119773606

Centisome position: 13.24

GC content: 58.81

Gene sequence:

>420_bases
ATGTCCCCTAATTTCCCCATGCGTTCCCGGCAACGCGGCAGTGTGCTCATCATAGGGATCTTTGTGATCACTGTGATGTT
TTTGCTCGCGGCGGCGCTGATCCGCATGGTCAGTGATGCCGATGAAGCCCTGACGCTGGAAGTGTGGGGCACCCGGGCGC
TGGCCTCCGCCAACAGCGGCGCCGATGCGGCCATGGCGAAGCTTTTTCCGATCAATGGCGGCACGCCTGTGTGCAACAGC
AGCGACAGCTGGATGCCGCCAGCTGTGGTGGGATTTCATGGTTGTGTGGTGAATCTGTCCTGCAATAGTTTCAGTGCCGA
AGGGGTGACGCAGTACCTCGTTGTCAGCCGTGCATTCTGCGAAAGTGGTGATCTGAGAGTAAGCCGTAGCGTGGAGGTCA
CTGCCCGTGCCATACCTTAG

Upstream 100 bases:

>100_bases
CTGGCGTCCACCCTGATAAACAATGCCATGGTACAACTGGACGTGGGCTTTGCCGTGAATGGCGAAACCTTCCAATATCA
ACATCAGGTACATACAGCCA

Downstream 100 bases:

>100_bases
ACTTCTGCTGATAGTTCTGTGTTGCTGGCTGCCAGGGGCTCTGGCTGTGCCACTTTGCTCCGATATTTTTACCAAACCAC
CTACGGGTCCCAATAATCCC

Product: MSHA biogenesis protein MshP

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 139; Mature: 138

Protein sequence:

>139_residues
MSPNFPMRSRQRGSVLIIGIFVITVMFLLAAALIRMVSDADEALTLEVWGTRALASANSGADAAMAKLFPINGGTPVCNS
SDSWMPPAVVGFHGCVVNLSCNSFSAEGVTQYLVVSRAFCESGDLRVSRSVEVTARAIP

Sequences:

>Translated_139_residues
MSPNFPMRSRQRGSVLIIGIFVITVMFLLAAALIRMVSDADEALTLEVWGTRALASANSGADAAMAKLFPINGGTPVCNS
SDSWMPPAVVGFHGCVVNLSCNSFSAEGVTQYLVVSRAFCESGDLRVSRSVEVTARAIP
>Mature_138_residues
SPNFPMRSRQRGSVLIIGIFVITVMFLLAAALIRMVSDADEALTLEVWGTRALASANSGADAAMAKLFPINGGTPVCNSS
DSWMPPAVVGFHGCVVNLSCNSFSAEGVTQYLVVSRAFCESGDLRVSRSVEVTARAIP

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 14698; Mature: 14567

Theoretical pI: Translated: 7.13; Mature: 7.13

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.9 %Cys     (Translated Protein)
4.3 %Met     (Translated Protein)
7.2 %Cys+Met (Translated Protein)
2.9 %Cys     (Mature Protein)
3.6 %Met     (Mature Protein)
6.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSPNFPMRSRQRGSVLIIGIFVITVMFLLAAALIRMVSDADEALTLEVWGTRALASANSG
CCCCCCCCCCCCCCEEEEHHHHHHHHHHHHHHHHHHHCCCCCEEEEEECCCEEECCCCCC
ADAAMAKLFPINGGTPVCNSSDSWMPPAVVGFHGCVVNLSCNSFSAEGVTQYLVVSRAFC
CCCEEEEEEECCCCCCCCCCCCCCCCCHHEEECEEEEEEECCCCCCCHHHHHHHHHHHHC
ESGDLRVSRSVEVTARAIP
CCCCEEEECCEEEEEECCC
>Mature Secondary Structure 
SPNFPMRSRQRGSVLIIGIFVITVMFLLAAALIRMVSDADEALTLEVWGTRALASANSG
CCCCCCCCCCCCCEEEEHHHHHHHHHHHHHHHHHHHCCCCCEEEEEECCCEEECCCCCC
ADAAMAKLFPINGGTPVCNSSDSWMPPAVVGFHGCVVNLSCNSFSAEGVTQYLVVSRAFC
CCCEEEEEEECCCCCCCCCCCCCCCCCHHEEECEEEEEEECCCCCCCHHHHHHHHHHHHC
ESGDLRVSRSVEVTARAIP
CCCCEEEECCEEEEEECCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA