Click here to switch to the map view.

The map label for this gene is 119773457

Identifier: 119773457

GI number: 119773457

Start: 381108

End: 381935

Strand: Reverse

Name: 119773457

Synonym: Sama_0316

Alternate gene names: NA

Gene position: 381935-381108 (Counterclockwise)

Preceding gene: 119773458

Following gene: 119773456

Centisome position: 8.87

GC content: 36.47

Gene sequence:

>828_bases
GTGGAAACTTTATCGGATCAAGGAATTAAGAAATTTCTGGAAAATTCACCTTTATATTCATGGAAGACATTTGCTCAGCC
TGAAAAAATGAGAACGAGTCTTTGGATTAGGGAAATTGATGAATTCTGTGAAACTTGTAACCAAATAAGGCCGTTTCAAG
ACCTTCGGAGCTTAGGCGGTATTACTAGCCACCACCCAATGGGAAAAATACAGTTTTTACAATCAGGAACCTCGTATTTC
ACCTTCACTTGCGTATCTTGTAAAACTGAGAATCATACTTTTTTGGTAGAACAAGAAGTAACTGAAGAAACTGTGAAGAT
TCAAAAATATGGGCAACGGCCCCGTAAAAAGCTTGAAAGAGATGGAAAACTTCAAAAGTTTTTTAAAGAAGATGCCGAGT
ACTATGAAAAAGCTCTAATATCTCTCAGTAACGGTTATGGAATTGCCGCTTTTGCGTATTTCAGAAGAATTGTTGAACTT
AACATAGTTAAACTTTTAGATCTTCTCGCATCAGACCTAGACCCATCTCAAGCAAATGATCCTATAAAAATAGCAATAGA
TGAACTGCGAAAAGAGTCTCCAATGAGCGATAAAATTAAAATCGCCAACAATGCTTTACCAGAGTATTTAAAACCTGACG
GACTAAACCCATTAGGAACAATCTATAGCCTTCTTAGCGAAGGAGTTCATAGTTTAACTGACGAAGAATGTTTAGTTAAA
GCTGAAAGCTTGCAAGCTTGTCTGAGTTTCCTTATTGCTGAATTAGCCTCAAGAAAAAGACATAAAGATAGCTTTAAAAA
AATGGTCGGTGGTTTAAAGGGCAGCTAA

Upstream 100 bases:

>100_bases
AAAACAGTGTGTTGCGTGAGTTCTTGCCAAGTGGTCGGAGGTGAGATTATGCGCATACGCACTATTCAAATGTTAGCTGC
CCATAGAAATCAGGAGTCAC

Downstream 100 bases:

>100_bases
CAAGTGACTGTGGTATTCCGTCAGAATTTAATACGCCAAGTCAAGGGACTTTTCGAACTGTCGAGTTCCTGTAAATGCGG
ACTCGTAAGTAGGCGTATGC

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 275; Mature: 275

Protein sequence:

>275_residues
METLSDQGIKKFLENSPLYSWKTFAQPEKMRTSLWIREIDEFCETCNQIRPFQDLRSLGGITSHHPMGKIQFLQSGTSYF
TFTCVSCKTENHTFLVEQEVTEETVKIQKYGQRPRKKLERDGKLQKFFKEDAEYYEKALISLSNGYGIAAFAYFRRIVEL
NIVKLLDLLASDLDPSQANDPIKIAIDELRKESPMSDKIKIANNALPEYLKPDGLNPLGTIYSLLSEGVHSLTDEECLVK
AESLQACLSFLIAELASRKRHKDSFKKMVGGLKGS

Sequences:

>Translated_275_residues
METLSDQGIKKFLENSPLYSWKTFAQPEKMRTSLWIREIDEFCETCNQIRPFQDLRSLGGITSHHPMGKIQFLQSGTSYF
TFTCVSCKTENHTFLVEQEVTEETVKIQKYGQRPRKKLERDGKLQKFFKEDAEYYEKALISLSNGYGIAAFAYFRRIVEL
NIVKLLDLLASDLDPSQANDPIKIAIDELRKESPMSDKIKIANNALPEYLKPDGLNPLGTIYSLLSEGVHSLTDEECLVK
AESLQACLSFLIAELASRKRHKDSFKKMVGGLKGS
>Mature_275_residues
METLSDQGIKKFLENSPLYSWKTFAQPEKMRTSLWIREIDEFCETCNQIRPFQDLRSLGGITSHHPMGKIQFLQSGTSYF
TFTCVSCKTENHTFLVEQEVTEETVKIQKYGQRPRKKLERDGKLQKFFKEDAEYYEKALISLSNGYGIAAFAYFRRIVEL
NIVKLLDLLASDLDPSQANDPIKIAIDELRKESPMSDKIKIANNALPEYLKPDGLNPLGTIYSLLSEGVHSLTDEECLVK
AESLQACLSFLIAELASRKRHKDSFKKMVGGLKGS

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 31320; Mature: 31320

Theoretical pI: Translated: 7.42; Mature: 7.42

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.2 %Cys     (Translated Protein)
1.8 %Met     (Translated Protein)
4.0 %Cys+Met (Translated Protein)
2.2 %Cys     (Mature Protein)
1.8 %Met     (Mature Protein)
4.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
METLSDQGIKKFLENSPLYSWKTFAQPEKMRTSLWIREIDEFCETCNQIRPFQDLRSLGG
CCCCCHHHHHHHHHCCCCCCHHHHCCHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHCC
ITSHHPMGKIQFLQSGTSYFTFTCVSCKTENHTFLVEQEVTEETVKIQKYGQRPRKKLER
CCCCCCCCHHHHHHCCCCEEEEEEEEECCCCCEEEEHHHHHHHHHHHHHHCCHHHHHHHH
DGKLQKFFKEDAEYYEKALISLSNGYGIAAFAYFRRIVELNIVKLLDLLASDLDPSQAND
CCHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCC
PIKIAIDELRKESPMSDKIKIANNALPEYLKPDGLNPLGTIYSLLSEGVHSLTDEECLVK
CHHHHHHHHHCCCCCCCHHHHHHHCCHHHCCCCCCCHHHHHHHHHHHHHHHCCCHHHHHH
AESLQACLSFLIAELASRKRHKDSFKKMVGGLKGS
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCC
>Mature Secondary Structure
METLSDQGIKKFLENSPLYSWKTFAQPEKMRTSLWIREIDEFCETCNQIRPFQDLRSLGG
CCCCCHHHHHHHHHCCCCCCHHHHCCHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHCC
ITSHHPMGKIQFLQSGTSYFTFTCVSCKTENHTFLVEQEVTEETVKIQKYGQRPRKKLER
CCCCCCCCHHHHHHCCCCEEEEEEEEECCCCCEEEEHHHHHHHHHHHHHHCCHHHHHHHH
DGKLQKFFKEDAEYYEKALISLSNGYGIAAFAYFRRIVELNIVKLLDLLASDLDPSQAND
CCHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCC
PIKIAIDELRKESPMSDKIKIANNALPEYLKPDGLNPLGTIYSLLSEGVHSLTDEECLVK
CHHHHHHHHHCCCCCCCHHHHHHHCCHHHCCCCCCCHHHHHHHHHHHHHHHCCCHHHHHH
AESLQACLSFLIAELASRKRHKDSFKKMVGGLKGS
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA