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The map label for this gene is nusG [H]

Identifier: 119773342

GI number: 119773342

Start: 235423

End: 235974

Strand: Direct

Name: nusG [H]

Synonym: Sama_0201

Alternate gene names: 119773342

Gene position: 235423-235974 (Clockwise)

Preceding gene: 119773341

Following gene: 119773343

Centisome position: 5.47

GC content: 50.72

Gene sequence:

>552_bases
ATGACTGAAGCTAAAGAAGCAAAGAAAAGATGGTATGTGGTACAGGCTTTCTCTGGTTATGAGGGGCGTGTAGCCAAGTC
TCTGGTCGAGCACATCAAGATGCACGGCATGGAGCAATATTTCGGTGAAGTGCTGGTGCCTACCGAAGAAGTGGTAGAAA
TGCGTGCGGGTCAGCGTCGCAAGAGCGAGCGTAAGTTTTTCCCCGGCTACGTTTTGGTGCAAATGGAAATGAACGATGAT
TCCTGGCACTTGGTGAAAAGCATCCCTCGCGTGATGGGCTTTATCGGCGGTACTTCAGACCGTCCGGCGCCTATCACTGA
CCGTGAAGCCGATGCCATCCTGCGTCGTCTGCAGGAAACCACAGAGTCTCCGACTCATCGCGTTATGTACGAACCCGGTG
AAGTTGTGCGTGTGGTCGATGGCCCATTCGCTGATTTCAACGGTACCGTAGAAGAAGTGGATTATGACAAGAGCCGCGTA
AAAGTGTCTGTTATGATCTTCGGCCGTTCTACACCGGTAGAATTGGACTTTAATCAGGTTGAAAAAAGCTGA

Upstream 100 bases:

>100_bases
TTCATCGTGCTGGCCGCAACCGCCGTACTGGCACTGATCCTCTGGGGTCTGGATGCGTTGCTGCTGAAAATCGTTAATTT
GATCACCGGTGTATAACTCG

Downstream 100 bases:

>100_bases
TTAAATAAAATACAAAATCCGTTTGGCAACGGGTGCGGATTTCTATATAATCCGCACCCGTTGTTTTCGGGGAGCCCCTC
GCATGTTGCTTGGAGCGTTT

Product: transcription antitermination protein NusG

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 183; Mature: 182

Protein sequence:

>183_residues
MTEAKEAKKRWYVVQAFSGYEGRVAKSLVEHIKMHGMEQYFGEVLVPTEEVVEMRAGQRRKSERKFFPGYVLVQMEMNDD
SWHLVKSIPRVMGFIGGTSDRPAPITDREADAILRRLQETTESPTHRVMYEPGEVVRVVDGPFADFNGTVEEVDYDKSRV
KVSVMIFGRSTPVELDFNQVEKS

Sequences:

>Translated_183_residues
MTEAKEAKKRWYVVQAFSGYEGRVAKSLVEHIKMHGMEQYFGEVLVPTEEVVEMRAGQRRKSERKFFPGYVLVQMEMNDD
SWHLVKSIPRVMGFIGGTSDRPAPITDREADAILRRLQETTESPTHRVMYEPGEVVRVVDGPFADFNGTVEEVDYDKSRV
KVSVMIFGRSTPVELDFNQVEKS
>Mature_182_residues
TEAKEAKKRWYVVQAFSGYEGRVAKSLVEHIKMHGMEQYFGEVLVPTEEVVEMRAGQRRKSERKFFPGYVLVQMEMNDDS
WHLVKSIPRVMGFIGGTSDRPAPITDREADAILRRLQETTESPTHRVMYEPGEVVRVVDGPFADFNGTVEEVDYDKSRVK
VSVMIFGRSTPVELDFNQVEKS

Specific function: Influences transcription termination and antitermination. Acts as a component of the transcription complex, and interacts with the termination factor rho and RNA polymerase [H]

COG id: COG0250

COG function: function code K; Transcription antiterminator

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 KOW domain [H]

Homologues:

Organism=Escherichia coli, GI1790414, Length=183, Percent_Identity=76.5027322404372, Blast_Score=293, Evalue=5e-81,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR005824
- InterPro:   IPR001062
- InterPro:   IPR015869
- InterPro:   IPR006645
- InterPro:   IPR014722
- InterPro:   IPR008991 [H]

Pfam domain/function: PF00467 KOW; PF02357 NusG [H]

EC number: NA

Molecular weight: Translated: 20994; Mature: 20863

Theoretical pI: Translated: 5.74; Mature: 5.74

Prosite motif: PS01014 NUSG

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
4.9 %Met     (Translated Protein)
4.9 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
4.4 %Met     (Mature Protein)
4.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTEAKEAKKRWYVVQAFSGYEGRVAKSLVEHIKMHGMEQYFGEVLVPTEEVVEMRAGQRR
CCCHHHHHHHEEEEEECCCCCCHHHHHHHHHHHHCCHHHHHCCCCCCHHHHHHHHHCHHH
KSERKFFPGYVLVQMEMNDDSWHLVKSIPRVMGFIGGTSDRPAPITDREADAILRRLQET
HHCCCCCCCEEEEEEEECCCCHHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHH
TESPTHRVMYEPGEVVRVVDGPFADFNGTVEEVDYDKSRVKVSVMIFGRSTPVELDFNQV
HCCCCCEEEECCCCEEEEECCCCCCCCCCHHHCCCCCCCEEEEEEEEECCCCEEECHHHH
EKS
CCC
>Mature Secondary Structure 
TEAKEAKKRWYVVQAFSGYEGRVAKSLVEHIKMHGMEQYFGEVLVPTEEVVEMRAGQRR
CCHHHHHHHEEEEEECCCCCCHHHHHHHHHHHHCCHHHHHCCCCCCHHHHHHHHHCHHH
KSERKFFPGYVLVQMEMNDDSWHLVKSIPRVMGFIGGTSDRPAPITDREADAILRRLQET
HHCCCCCCCEEEEEEEECCCCHHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHH
TESPTHRVMYEPGEVVRVVDGPFADFNGTVEEVDYDKSRVKVSVMIFGRSTPVELDFNQV
HCCCCCEEEECCCCEEEEECCCCCCCCCCHHHCCCCCCCEEEEEEEEECCCCEEECHHHH
EKS
CCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 10952301 [H]