| Definition | Shewanella amazonensis SB2B chromosome, complete genome. |
|---|---|
| Accession | NC_008700 |
| Length | 4,306,142 |
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The map label for this gene is coaA
Identifier: 119773339
GI number: 119773339
Start: 231976
End: 232923
Strand: Reverse
Name: coaA
Synonym: Sama_0198
Alternate gene names: 119773339
Gene position: 232923-231976 (Counterclockwise)
Preceding gene: 119773381
Following gene: 119773336
Centisome position: 5.41
GC content: 51.79
Gene sequence:
>948_bases ATGATTAATAACCAGACGCAAGAAGCGCTTTATCTCGACTTCGACCGAGCGCGCTGGGCAGAGTTGAGAAACTCCGTTCC CCTGACACTGAGCGAGGCCGACCTGACGCGGTTGCGCGGTATTAACGAACGCATTTCCCTGTCTGAAGTAACCGACATTT ATCTGCCCCTTAGCAGACTGCTCAACCTCATCGTCGGTGCGCGTCAACAGCGCGGCCTGGTGTTGAATCAGTTCCTGGGC AACAAGCAACCTGATAGCCCTTACGTCATCAGTATCGCTGGCAGTGTGGCCGTGGGGAAAAGCACCACCGCCCGTATCCT GCAGGCATTGTTGAAGCAATGGCCCGAGCATCCCAAGGTTGACCTGGTCACCACCGACGGTTTTCTGTATCCACTGACTG AACTCAAGCGTAAAGGATTGCTGCAGCGTAAAGGCTTTCCCGAGAGTTACGACACCAAGATGCTGATTGACTTCGTTTCT GCAGTAAAGTCCGGCGCCGAACGTGTTGAAGTACCGCTGTATTCTCACATCATCTACGACCGCTTGCCCTATGAGCGGCA AGTCATCCAAAAGCCGGACATATTGATCCTTGAAGGCTTAAACGTCTTGCAAACCGGTCTCGACTCACCAGTGGATATCC GCAGGCCCTTTGTGTCCGACTTTGTCGATTTCTCTATTTATGTGGATGCAGATGAGTCTTTACTGAAGTCCTGGTATATC GAACGCTTCCTGCAATTCAGAAGCAGTGCCTTCGCAGATGAAAATTCCTACTTCCGCCATTACGCCAGTTTGAATGACAC ACAAGCCACTGAAACAGCCTCGCAAATTTGGGACGGTATCAACGGTCCCAACTTGCGCATGAATATCCAGCCTACCCGCG AACGGGCACATCTTATCCTGCGCAAAGGCGCCGATCATTTGATGAATCGGGTACTGCTGCGTAAATGA
Upstream 100 bases:
>100_bases GCCTATGACAAATTGCTTCTGTCAGTGCACAAAAGCCGTTGAACTATTGTTAAAGCACCATAGCTGTTGTACTGTGCGCA GCCTAAGGCGAGGAATTTGA
Downstream 100 bases:
>100_bases ACCATAAAAAATGCCGACCAGCGGATATAGGCTTGGTCGGCATTATCTGGCTCAATGGGTGTTACGCTGGCCGCAAACTG ATTTCCCCACCGATATAGCT
Product: pantothenate kinase
Products: NA
Alternate protein names: Pantothenic acid kinase
Number of amino acids: Translated: 315; Mature: 315
Protein sequence:
>315_residues MINNQTQEALYLDFDRARWAELRNSVPLTLSEADLTRLRGINERISLSEVTDIYLPLSRLLNLIVGARQQRGLVLNQFLG NKQPDSPYVISIAGSVAVGKSTTARILQALLKQWPEHPKVDLVTTDGFLYPLTELKRKGLLQRKGFPESYDTKMLIDFVS AVKSGAERVEVPLYSHIIYDRLPYERQVIQKPDILILEGLNVLQTGLDSPVDIRRPFVSDFVDFSIYVDADESLLKSWYI ERFLQFRSSAFADENSYFRHYASLNDTQATETASQIWDGINGPNLRMNIQPTRERAHLILRKGADHLMNRVLLRK
Sequences:
>Translated_315_residues MINNQTQEALYLDFDRARWAELRNSVPLTLSEADLTRLRGINERISLSEVTDIYLPLSRLLNLIVGARQQRGLVLNQFLG NKQPDSPYVISIAGSVAVGKSTTARILQALLKQWPEHPKVDLVTTDGFLYPLTELKRKGLLQRKGFPESYDTKMLIDFVS AVKSGAERVEVPLYSHIIYDRLPYERQVIQKPDILILEGLNVLQTGLDSPVDIRRPFVSDFVDFSIYVDADESLLKSWYI ERFLQFRSSAFADENSYFRHYASLNDTQATETASQIWDGINGPNLRMNIQPTRERAHLILRKGADHLMNRVLLRK >Mature_315_residues MINNQTQEALYLDFDRARWAELRNSVPLTLSEADLTRLRGINERISLSEVTDIYLPLSRLLNLIVGARQQRGLVLNQFLG NKQPDSPYVISIAGSVAVGKSTTARILQALLKQWPEHPKVDLVTTDGFLYPLTELKRKGLLQRKGFPESYDTKMLIDFVS AVKSGAERVEVPLYSHIIYDRLPYERQVIQKPDILILEGLNVLQTGLDSPVDIRRPFVSDFVDFSIYVDADESLLKSWYI ERFLQFRSSAFADENSYFRHYASLNDTQATETASQIWDGINGPNLRMNIQPTRERAHLILRKGADHLMNRVLLRK
Specific function: Coenzyme A (CoA) biosynthesis; first step. [C]
COG id: COG1072
COG function: function code H; Panthothenate kinase
Gene ontology:
Cell location: Cytoplasm (Probable)
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the prokaryotic pantothenate kinase family
Homologues:
Organism=Escherichia coli, GI1790409, Length=314, Percent_Identity=59.5541401273885, Blast_Score=377, Evalue=1e-106,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): COAA_SHEAM (A1S203)
Other databases:
- EMBL: CP000507 - RefSeq: YP_926079.1 - ProteinModelPortal: A1S203 - SMR: A1S203 - STRING: A1S203 - GeneID: 4602454 - GenomeReviews: CP000507_GR - KEGG: saz:Sama_0198 - NMPDR: fig|326297.7.peg.188 - eggNOG: COG1072 - HOGENOM: HBG732538 - OMA: GLNVLQP - PhylomeDB: A1S203 - ProtClustDB: PRK05439 - GO: GO:0005737 - HAMAP: MF_00215 - InterPro: IPR004566 - InterPro: IPR006083 - PANTHER: PTHR10285:SF7 - PIRSF: PIRSF000545 - TIGRFAMs: TIGR00554
Pfam domain/function: PF00485 PRK
EC number: =2.7.1.33
Molecular weight: Translated: 36092; Mature: 36092
Theoretical pI: Translated: 8.65; Mature: 8.65
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 1.3 %Met (Translated Protein) 1.3 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 1.3 %Met (Mature Protein) 1.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MINNQTQEALYLDFDRARWAELRNSVPLTLSEADLTRLRGINERISLSEVTDIYLPLSRL CCCCCCCCCEEEECHHHHHHHHHCCCCCEECHHHHHHHHCCCCCCCHHHHHHHHHHHHHH LNLIVGARQQRGLVLNQFLGNKQPDSPYVISIAGSVAVGKSTTARILQALLKQWPEHPKV HHHHHCCHHHCCCHHHHHHCCCCCCCCEEEEEECCEEECCCHHHHHHHHHHHHCCCCCCE DLVTTDGFLYPLTELKRKGLLQRKGFPESYDTKMLIDFVSAVKSGAERVEVPLYSHIIYD EEEECCCCCHHHHHHHHCCHHHHCCCCCCCCHHHHHHHHHHHHCCHHHCCCHHHHHHHHH RLPYERQVIQKPDILILEGLNVLQTGLDSPVDIRRPFVSDFVDFSIYVDADESLLKSWYI CCCHHHHHHCCCCEEEECCCHHHHHCCCCCHHHHHHHHHHHHCEEEEECCCHHHHHHHHH ERFLQFRSSAFADENSYFRHYASLNDTQATETASQIWDGINGPNLRMNIQPTRERAHLIL HHHHHHHHHHCCCCCHHHHHHHCCCCHHHHHHHHHHHCCCCCCCEEEECCCCHHHHHHHH RKGADHLMNRVLLRK HCCHHHHHHHHHHCC >Mature Secondary Structure MINNQTQEALYLDFDRARWAELRNSVPLTLSEADLTRLRGINERISLSEVTDIYLPLSRL CCCCCCCCCEEEECHHHHHHHHHCCCCCEECHHHHHHHHCCCCCCCHHHHHHHHHHHHHH LNLIVGARQQRGLVLNQFLGNKQPDSPYVISIAGSVAVGKSTTARILQALLKQWPEHPKV HHHHHCCHHHCCCHHHHHHCCCCCCCCEEEEEECCEEECCCHHHHHHHHHHHHCCCCCCE DLVTTDGFLYPLTELKRKGLLQRKGFPESYDTKMLIDFVSAVKSGAERVEVPLYSHIIYD EEEECCCCCHHHHHHHHCCHHHHCCCCCCCCHHHHHHHHHHHHCCHHHCCCHHHHHHHHH RLPYERQVIQKPDILILEGLNVLQTGLDSPVDIRRPFVSDFVDFSIYVDADESLLKSWYI CCCHHHHHHCCCCEEEECCCHHHHHCCCCCHHHHHHHHHHHHCEEEEECCCHHHHHHHHH ERFLQFRSSAFADENSYFRHYASLNDTQATETASQIWDGINGPNLRMNIQPTRERAHLIL HHHHHHHHHHCCCCCHHHHHHHCCCCHHHHHHHHHHHCCCCCCCEEEECCCCHHHHHHHH RKGADHLMNRVLLRK HCCHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA