| Definition | Shewanella amazonensis SB2B chromosome, complete genome. |
|---|---|
| Accession | NC_008700 |
| Length | 4,306,142 |
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The map label for this gene is exeI [H]
Identifier: 119773315
GI number: 119773315
Start: 204232
End: 204597
Strand: Direct
Name: exeI [H]
Synonym: Sama_0174
Alternate gene names: 119773315
Gene position: 204232-204597 (Clockwise)
Preceding gene: 119773314
Following gene: 119773316
Centisome position: 4.74
GC content: 48.91
Gene sequence:
>366_bases ATGAAATCGCGGGGGATGACGCTGCTGGAAGTCATGATGGCACTGGTCATCTTTTCCATCGCTGCCATCTCGCTGACCAA GAGTATGAGTGAGATGATGGGCAATCTGCCCATTCTCGAAGAGCGTACCCTGGCACAATGGGTCGCTGACAATCAGATGG TGGATGCCAAACTGGAAAAAGGCTTCCCCTCCATTGGTAAAAAAGACGGCGAAGTGGAATTGGCTGGACGTACCTGGTAC TGGCGCAAAGAAGTGGTAAAGACCACAGATGATAATTTTCGCATGATCCGCATTAAGGTCAGCGACGATGACAGATATTC ACGGACTCTGGCCGAGATAAGCACTTATGTCTTTAAGAGAGAATAA
Upstream 100 bases:
>100_bases CAGGAAGTCGACGTGCTGATAAGCGGTGATGCTCTGGGTCGACTCAAGCTGGGGAGGGGTGACGATGAAACGCCTTAACT CGCAACCTCAGACTGGGAAG
Downstream 100 bases:
>100_bases GCCTCAGCGGGGTTTTACCCTGATTGAGATGCTGCTGGCCATTGCCATCTTTGCCTTGTTGGGGCTGGCGGCAAATGCGG TGCTGGGGACTGTGCTGAAA
Product: general secretion pathway protein I
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 121; Mature: 121
Protein sequence:
>121_residues MKSRGMTLLEVMMALVIFSIAAISLTKSMSEMMGNLPILEERTLAQWVADNQMVDAKLEKGFPSIGKKDGEVELAGRTWY WRKEVVKTTDDNFRMIRIKVSDDDRYSRTLAEISTYVFKRE
Sequences:
>Translated_121_residues MKSRGMTLLEVMMALVIFSIAAISLTKSMSEMMGNLPILEERTLAQWVADNQMVDAKLEKGFPSIGKKDGEVELAGRTWY WRKEVVKTTDDNFRMIRIKVSDDDRYSRTLAEISTYVFKRE >Mature_121_residues MKSRGMTLLEVMMALVIFSIAAISLTKSMSEMMGNLPILEERTLAQWVADNQMVDAKLEKGFPSIGKKDGEVELAGRTWY WRKEVVKTTDDNFRMIRIKVSDDDRYSRTLAEISTYVFKRE
Specific function: Involved in a general secretion pathway (GSP) for the export of proteins [H]
COG id: COG2165
COG function: function code NU; Type II secretory pathway, pseudopilin PulG
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the GSP I family [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR010052 - InterPro: IPR012902 - InterPro: IPR001120 - InterPro: IPR003413 [H]
Pfam domain/function: PF02501 GSPII_IJ; PF07963 N_methyl [H]
EC number: NA
Molecular weight: Translated: 13960; Mature: 13960
Theoretical pI: Translated: 8.92; Mature: 8.92
Prosite motif: PS00409 PROKAR_NTER_METHYL
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 7.4 %Met (Translated Protein) 7.4 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 7.4 %Met (Mature Protein) 7.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKSRGMTLLEVMMALVIFSIAAISLTKSMSEMMGNLPILEERTLAQWVADNQMVDAKLEK CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHCCCHHHHHHHC GFPSIGKKDGEVELAGRTWYWRKEVVKTTDDNFRMIRIKVSDDDRYSRTLAEISTYVFKR CCCCCCCCCCCEEECCCCCHHHHHHHHCCCCCEEEEEEEECCCCHHHHHHHHHHHHHHCC E C >Mature Secondary Structure MKSRGMTLLEVMMALVIFSIAAISLTKSMSEMMGNLPILEERTLAQWVADNQMVDAKLEK CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHCCCHHHHHHHC GFPSIGKKDGEVELAGRTWYWRKEVVKTTDDNFRMIRIKVSDDDRYSRTLAEISTYVFKR CCCCCCCCCCCEEECCCCCHHHHHHHHCCCCCEEEEEEEECCCCHHHHHHHHHHHHHHCC E C
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 8407845 [H]