Definition Shewanella amazonensis SB2B chromosome, complete genome.
Accession NC_008700
Length 4,306,142

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The map label for this gene is exeI [H]

Identifier: 119773315

GI number: 119773315

Start: 204232

End: 204597

Strand: Direct

Name: exeI [H]

Synonym: Sama_0174

Alternate gene names: 119773315

Gene position: 204232-204597 (Clockwise)

Preceding gene: 119773314

Following gene: 119773316

Centisome position: 4.74

GC content: 48.91

Gene sequence:

>366_bases
ATGAAATCGCGGGGGATGACGCTGCTGGAAGTCATGATGGCACTGGTCATCTTTTCCATCGCTGCCATCTCGCTGACCAA
GAGTATGAGTGAGATGATGGGCAATCTGCCCATTCTCGAAGAGCGTACCCTGGCACAATGGGTCGCTGACAATCAGATGG
TGGATGCCAAACTGGAAAAAGGCTTCCCCTCCATTGGTAAAAAAGACGGCGAAGTGGAATTGGCTGGACGTACCTGGTAC
TGGCGCAAAGAAGTGGTAAAGACCACAGATGATAATTTTCGCATGATCCGCATTAAGGTCAGCGACGATGACAGATATTC
ACGGACTCTGGCCGAGATAAGCACTTATGTCTTTAAGAGAGAATAA

Upstream 100 bases:

>100_bases
CAGGAAGTCGACGTGCTGATAAGCGGTGATGCTCTGGGTCGACTCAAGCTGGGGAGGGGTGACGATGAAACGCCTTAACT
CGCAACCTCAGACTGGGAAG

Downstream 100 bases:

>100_bases
GCCTCAGCGGGGTTTTACCCTGATTGAGATGCTGCTGGCCATTGCCATCTTTGCCTTGTTGGGGCTGGCGGCAAATGCGG
TGCTGGGGACTGTGCTGAAA

Product: general secretion pathway protein I

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 121; Mature: 121

Protein sequence:

>121_residues
MKSRGMTLLEVMMALVIFSIAAISLTKSMSEMMGNLPILEERTLAQWVADNQMVDAKLEKGFPSIGKKDGEVELAGRTWY
WRKEVVKTTDDNFRMIRIKVSDDDRYSRTLAEISTYVFKRE

Sequences:

>Translated_121_residues
MKSRGMTLLEVMMALVIFSIAAISLTKSMSEMMGNLPILEERTLAQWVADNQMVDAKLEKGFPSIGKKDGEVELAGRTWY
WRKEVVKTTDDNFRMIRIKVSDDDRYSRTLAEISTYVFKRE
>Mature_121_residues
MKSRGMTLLEVMMALVIFSIAAISLTKSMSEMMGNLPILEERTLAQWVADNQMVDAKLEKGFPSIGKKDGEVELAGRTWY
WRKEVVKTTDDNFRMIRIKVSDDDRYSRTLAEISTYVFKRE

Specific function: Involved in a general secretion pathway (GSP) for the export of proteins [H]

COG id: COG2165

COG function: function code NU; Type II secretory pathway, pseudopilin PulG

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the GSP I family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR010052
- InterPro:   IPR012902
- InterPro:   IPR001120
- InterPro:   IPR003413 [H]

Pfam domain/function: PF02501 GSPII_IJ; PF07963 N_methyl [H]

EC number: NA

Molecular weight: Translated: 13960; Mature: 13960

Theoretical pI: Translated: 8.92; Mature: 8.92

Prosite motif: PS00409 PROKAR_NTER_METHYL

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
7.4 %Met     (Translated Protein)
7.4 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
7.4 %Met     (Mature Protein)
7.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKSRGMTLLEVMMALVIFSIAAISLTKSMSEMMGNLPILEERTLAQWVADNQMVDAKLEK
CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHCCCHHHHHHHC
GFPSIGKKDGEVELAGRTWYWRKEVVKTTDDNFRMIRIKVSDDDRYSRTLAEISTYVFKR
CCCCCCCCCCCEEECCCCCHHHHHHHHCCCCCEEEEEEEECCCCHHHHHHHHHHHHHHCC
E
C
>Mature Secondary Structure
MKSRGMTLLEVMMALVIFSIAAISLTKSMSEMMGNLPILEERTLAQWVADNQMVDAKLEK
CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHCCCHHHHHHHC
GFPSIGKKDGEVELAGRTWYWRKEVVKTTDDNFRMIRIKVSDDDRYSRTLAEISTYVFKR
CCCCCCCCCCCEEECCCCCHHHHHHHHCCCCCEEEEEEEECCCCHHHHHHHHHHHHHHCC
E
C

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 8407845 [H]