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The map label for this gene is hslR [H]

Identifier: 119773308

GI number: 119773308

Start: 196621

End: 197025

Strand: Reverse

Name: hslR [H]

Synonym: Sama_0167

Alternate gene names: 119773308

Gene position: 197025-196621 (Counterclockwise)

Preceding gene: 119773321

Following gene: 119773307

Centisome position: 4.58

GC content: 50.62

Gene sequence:

>405_bases
ATGGAATCCGGGAATCCAATACTGCAATCCGTCCGCCTCGATAAATGGCTCTGGGCCGCTCGTTTTTACAAGACCCGAGC
ACTGGCCAAGGAAATGATTAACGGCGGTAAAGTACATTACAACGGGGCCCGCACCAAATCCAGCAAGAATGCGGAAGTGG
GTGCTGTGCTTAAGATACGTCAGGGATATGACGAAAAAGAGGTGGTCATTAAAAAATTGTCGGAACAGCGACAAAATGCC
ACTCTGGCGCAAACCCTGTATGAAGAAACGGCGCAGAGCATACAAAAACGGTCCGCCAATGCCGAGGCTCGACGCCTGAA
TATATTGAACAATCCGTCACCGGACACCAAGCCTGATAAGAAACAGCGCCGTGAGTTGCTGAGGGCCAAGTCCGGCGATT
ATTAA

Upstream 100 bases:

>100_bases
TAAAATGGCAATTCTGCGTAGGGATCAAGCGCATGAACCTGCACAACGTGATCCGGCCACTATCTATATGTAGCAAATGT
TTGCAAAAGTGGAGGCATTT

Downstream 100 bases:

>100_bases
CCCAGCGCCTGGCGCATGAAGATTAACGTGATGAACAAAGACACTTTATACCGCTATTTGTTTGAAAATGCCGACGTGCG
CGGCGAACTGGTGCAACTGG

Product: heat shock protein 15

Products: NA

Alternate protein names: HSP15 [H]

Number of amino acids: Translated: 134; Mature: 134

Protein sequence:

>134_residues
MESGNPILQSVRLDKWLWAARFYKTRALAKEMINGGKVHYNGARTKSSKNAEVGAVLKIRQGYDEKEVVIKKLSEQRQNA
TLAQTLYEETAQSIQKRSANAEARRLNILNNPSPDTKPDKKQRRELLRAKSGDY

Sequences:

>Translated_134_residues
MESGNPILQSVRLDKWLWAARFYKTRALAKEMINGGKVHYNGARTKSSKNAEVGAVLKIRQGYDEKEVVIKKLSEQRQNA
TLAQTLYEETAQSIQKRSANAEARRLNILNNPSPDTKPDKKQRRELLRAKSGDY
>Mature_134_residues
MESGNPILQSVRLDKWLWAARFYKTRALAKEMINGGKVHYNGARTKSSKNAEVGAVLKIRQGYDEKEVVIKKLSEQRQNA
TLAQTLYEETAQSIQKRSANAEARRLNILNNPSPDTKPDKKQRRELLRAKSGDY

Specific function: Involved in the recycling of free 50S ribosomal subunits that still carry a nascent chain. Binds RNA more specifically than DNA. Binds with very high affinity to the free 50S ribosomal subunit. Does not bind it when it is part of the 70S ribosome [H]

COG id: COG1188

COG function: function code J; Ribosome-associated heat shock protein implicated in the recycling of the 50S subunit (S4 paralog)

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 S4 RNA-binding domain [H]

Homologues:

Organism=Escherichia coli, GI1789803, Length=123, Percent_Identity=64.2276422764228, Blast_Score=166, Evalue=3e-43,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR002942 [H]

Pfam domain/function: PF01479 S4 [H]

EC number: NA

Molecular weight: Translated: 15274; Mature: 15274

Theoretical pI: Translated: 10.72; Mature: 10.72

Prosite motif: PS50889 S4

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
1.5 %Met     (Translated Protein)
1.5 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
1.5 %Met     (Mature Protein)
1.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MESGNPILQSVRLDKWLWAARFYKTRALAKEMINGGKVHYNGARTKSSKNAEVGAVLKIR
CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEECCCCCCCCCCCCHHHHHHHH
QGYDEKEVVIKKLSEQRQNATLAQTLYEETAQSIQKRSANAEARRLNILNNPSPDTKPDK
CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHCCCCCCCCCCCCH
KQRRELLRAKSGDY
HHHHHHHHHCCCCC
>Mature Secondary Structure
MESGNPILQSVRLDKWLWAARFYKTRALAKEMINGGKVHYNGARTKSSKNAEVGAVLKIR
CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEECCCCCCCCCCCCHHHHHHHH
QGYDEKEVVIKKLSEQRQNATLAQTLYEETAQSIQKRSANAEARRLNILNNPSPDTKPDK
CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHCCCCCCCCCCCCH
KQRRELLRAKSGDY
HHHHHHHHHCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 11206551; 11258796 [H]