Definition Shewanella amazonensis SB2B chromosome, complete genome.
Accession NC_008700
Length 4,306,142

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The map label for this gene is 119773278

Identifier: 119773278

GI number: 119773278

Start: 152768

End: 153964

Strand: Direct

Name: 119773278

Synonym: Sama_0136

Alternate gene names: NA

Gene position: 152768-153964 (Clockwise)

Preceding gene: 119773277

Following gene: 119773283

Centisome position: 3.55

GC content: 52.21

Gene sequence:

>1197_bases
ATGGCCGATAGGGCATCTGAAGCCGAATTGATAAAGTTGCCTGTCAGCAAACTCACCCGAGGCATGTTTGTGGCGGCTAT
TGAAAATAACGGCAAGGTCGCCGTTGCCAATGCCGGGCAAATCAAGAGCCGGGAGACCATCGCCAAGCTGGTTAAAAGCG
GTATTCATCATGTGTGGGTGGATGCAGAGCGCTCCTCCGACGAATCCGGTCTCAAACCCAAGTCTGCCCAGGGCAGTGCA
GCGCCAGCTGCCGGTGCTGTTCGTCCTTCTCGCGCCAACCGCGACCTGCGTCAAACCCAGGCCAAGAAACTCCTCCATGA
AGCCAAGGAACTTATCCGCAAGGTATTGTCCGAAACCTTCGAAGGCAAAGCCATTGAAGTAAAGCCTTTTGAGGCGCTGG
CCGACAATATGATTGAGTCAATCATGCTTGATGATGATGCCCTCAAATGTGTGTCGGCGCTGCGTGACAAAGATGCCTAT
CTGCTTGAACATTCAGTGAATGTAGCCTTTCTGTTGGTCACCTTTGGCAAGTATTTGAAGCTCGATCGTGAAACCTTAAA
GCAGATGGCGGTGGGCGGTGTGCTGCACGACATAGGTAAAATCAAGGTTGATAACAAGATTTTGCATAAGCCCGGCAAGC
TGACACCGGAAGAATTTGAGCACATGAAACTGCACCAGTTTTATGCGATGGACATTATGTCCGAAGCCTCGGCGCTGTCG
CAGATTTCAAAAGATGTATGCCTGATGCACCATGAAAAGCTCGATGGTCGCGGTTATCCCCGTGGTTTGAAGGGCGATGA
AATCCCACTCCACGGCCGCATGTCCTGTATCGTGGATATTTTCGATGCCCTGACCGCCACCCGCTGCTACAAAGAGGCCA
TGAGCCCTGCGGCCGCCTTTAAGATCTTGCTGAGTTTGACGCCTTTCCATCTGGACACCGATCTGGTGTACGAATTTATC
CGCTGTATCGGTGTCTATCCGGTGGGATCTCTGGTGGAGCTGTCCGACGGGCGTGTGGGCATTGTCTGGGAGTCCAAAGA
CAGGGATGCCCTGAGCCCGGTAGTGAAATGTTTTTATTCACTCAAGCACAAACGCTACACCGAAGTGAATTTTGTCGACC
TGCTCAAGTCAGATCTGAACATAGAGCGGGGCGTCTCCCCATCCAGCCTGGATGTAGACCCCAAGCCATTTTACTGA

Upstream 100 bases:

>100_bases
CACAAAATGTTAATGTGGTAGCCAGGGCGTCGGGTGGGCTGCGTTACTGTGGCTTAACATTATACTCAGGCTTTCATTGT
TGATGTTGGGGGTGAGTGAC

Downstream 100 bases:

>100_bases
GAATCGAAGCCGCCCAACCCAGAGTTTAAACTGTGGCACCACCGCAAACAGGGCAATTGGGCTGGCGTGGCAGTATCATC
TGGCGCATCTCCATCGTCAT

Product: putative metal dependent phosphohydrolase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 398; Mature: 397

Protein sequence:

>398_residues
MADRASEAELIKLPVSKLTRGMFVAAIENNGKVAVANAGQIKSRETIAKLVKSGIHHVWVDAERSSDESGLKPKSAQGSA
APAAGAVRPSRANRDLRQTQAKKLLHEAKELIRKVLSETFEGKAIEVKPFEALADNMIESIMLDDDALKCVSALRDKDAY
LLEHSVNVAFLLVTFGKYLKLDRETLKQMAVGGVLHDIGKIKVDNKILHKPGKLTPEEFEHMKLHQFYAMDIMSEASALS
QISKDVCLMHHEKLDGRGYPRGLKGDEIPLHGRMSCIVDIFDALTATRCYKEAMSPAAAFKILLSLTPFHLDTDLVYEFI
RCIGVYPVGSLVELSDGRVGIVWESKDRDALSPVVKCFYSLKHKRYTEVNFVDLLKSDLNIERGVSPSSLDVDPKPFY

Sequences:

>Translated_398_residues
MADRASEAELIKLPVSKLTRGMFVAAIENNGKVAVANAGQIKSRETIAKLVKSGIHHVWVDAERSSDESGLKPKSAQGSA
APAAGAVRPSRANRDLRQTQAKKLLHEAKELIRKVLSETFEGKAIEVKPFEALADNMIESIMLDDDALKCVSALRDKDAY
LLEHSVNVAFLLVTFGKYLKLDRETLKQMAVGGVLHDIGKIKVDNKILHKPGKLTPEEFEHMKLHQFYAMDIMSEASALS
QISKDVCLMHHEKLDGRGYPRGLKGDEIPLHGRMSCIVDIFDALTATRCYKEAMSPAAAFKILLSLTPFHLDTDLVYEFI
RCIGVYPVGSLVELSDGRVGIVWESKDRDALSPVVKCFYSLKHKRYTEVNFVDLLKSDLNIERGVSPSSLDVDPKPFY
>Mature_397_residues
ADRASEAELIKLPVSKLTRGMFVAAIENNGKVAVANAGQIKSRETIAKLVKSGIHHVWVDAERSSDESGLKPKSAQGSAA
PAAGAVRPSRANRDLRQTQAKKLLHEAKELIRKVLSETFEGKAIEVKPFEALADNMIESIMLDDDALKCVSALRDKDAYL
LEHSVNVAFLLVTFGKYLKLDRETLKQMAVGGVLHDIGKIKVDNKILHKPGKLTPEEFEHMKLHQFYAMDIMSEASALSQ
ISKDVCLMHHEKLDGRGYPRGLKGDEIPLHGRMSCIVDIFDALTATRCYKEAMSPAAAFKILLSLTPFHLDTDLVYEFIR
CIGVYPVGSLVELSDGRVGIVWESKDRDALSPVVKCFYSLKHKRYTEVNFVDLLKSDLNIERGVSPSSLDVDPKPFY

Specific function: Unknown

COG id: COG2206

COG function: function code T; HD-GYP domain

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Contains 1 HD domain [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001054
- InterPro:   IPR000160
- InterPro:   IPR003607 [H]

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 44162; Mature: 44030

Theoretical pI: Translated: 7.91; Mature: 7.91

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.5 %Cys     (Translated Protein)
2.8 %Met     (Translated Protein)
4.3 %Cys+Met (Translated Protein)
1.5 %Cys     (Mature Protein)
2.5 %Met     (Mature Protein)
4.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MADRASEAELIKLPVSKLTRGMFVAAIENNGKVAVANAGQIKSRETIAKLVKSGIHHVWV
CCCCCCCCHHEECCHHHHCCCEEEEEEECCCEEEEECCCCCCHHHHHHHHHHCCCCEEEE
DAERSSDESGLKPKSAQGSAAPAAGAVRPSRANRDLRQTQAKKLLHEAKELIRKVLSETF
ECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHC
EGKAIEVKPFEALADNMIESIMLDDDALKCVSALRDKDAYLLEHSVNVAFLLVTFGKYLK
CCCEEEECCHHHHHHHHHHHHHCCHHHHHHHHHHHCCCCEEHHHCCCHHHHHHHHHHHHH
LDRETLKQMAVGGVLHDIGKIKVDNKILHKPGKLTPEEFEHMKLHQFYAMDIMSEASALS
HHHHHHHHHHHHHHHHHHCCEEECCHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHH
QISKDVCLMHHEKLDGRGYPRGLKGDEIPLHGRMSCIVDIFDALTATRCYKEAMSPAAAF
HHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCHHHHH
KILLSLTPFHLDTDLVYEFIRCIGVYPVGSLVELSDGRVGIVWESKDRDALSPVVKCFYS
HHHHHHCCCCCCHHHHHHHHHHHCCCCCCCEEEECCCEEEEEECCCCCHHHHHHHHHHHH
LKHKRYTEVNFVDLLKSDLNIERGVSPSSLDVDPKPFY
HHHCCCCCHHHHHHHHHHCCHHCCCCCCCCCCCCCCCC
>Mature Secondary Structure 
ADRASEAELIKLPVSKLTRGMFVAAIENNGKVAVANAGQIKSRETIAKLVKSGIHHVWV
CCCCCCCHHEECCHHHHCCCEEEEEEECCCEEEEECCCCCCHHHHHHHHHHCCCCEEEE
DAERSSDESGLKPKSAQGSAAPAAGAVRPSRANRDLRQTQAKKLLHEAKELIRKVLSETF
ECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHC
EGKAIEVKPFEALADNMIESIMLDDDALKCVSALRDKDAYLLEHSVNVAFLLVTFGKYLK
CCCEEEECCHHHHHHHHHHHHHCCHHHHHHHHHHHCCCCEEHHHCCCHHHHHHHHHHHHH
LDRETLKQMAVGGVLHDIGKIKVDNKILHKPGKLTPEEFEHMKLHQFYAMDIMSEASALS
HHHHHHHHHHHHHHHHHHCCEEECCHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHH
QISKDVCLMHHEKLDGRGYPRGLKGDEIPLHGRMSCIVDIFDALTATRCYKEAMSPAAAF
HHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCHHHHH
KILLSLTPFHLDTDLVYEFIRCIGVYPVGSLVELSDGRVGIVWESKDRDALSPVVKCFYS
HHHHHHCCCCCCHHHHHHHHHHHCCCCCCCEEEECCCEEEEEECCCCCHHHHHHHHHHHH
LKHKRYTEVNFVDLLKSDLNIERGVSPSSLDVDPKPFY
HHHCCCCCHHHHHHHHHHCCHHCCCCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 9537320 [H]