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The map label for this gene is elbB [H]

Identifier: 119773236

GI number: 119773236

Start: 107836

End: 108489

Strand: Direct

Name: elbB [H]

Synonym: Sama_0094

Alternate gene names: 119773236

Gene position: 107836-108489 (Clockwise)

Preceding gene: 119773234

Following gene: 119773242

Centisome position: 2.5

GC content: 53.36

Gene sequence:

>654_bases
ATGAAAAATATCGCAGTACTCTTGGCGGGCTGTGGTGTCTTTGACGGCAGCGAAATTCATGAATCGGTACTGACCTTGTT
GTCCCTGACCAAGGCCGGTGCCCGTTTTCAGTGTTTTGCACCGGATATTCCCCAGCTGCATGTGGTCAATCATCTGTCCG
GTGAGGTGGCAAAAGACGAACATCGCAACGTGTTGGTTGAGGCTGCGCGCATTGCCCGGGGCGACATTAAGGCCACCACA
GAGTTAAATGTGGCCGACTTCGATGCGTTGATTATCCCCGGTGGTTTTGGTGCGGCAAAAAACCTGTGCAATTTCGCTCT
GGTAGGCGCGGATTGCGACGTGGCACCCGAGGTGCGTGACTTTATTGCTGAGTTCGCCCTGTCGAAAAAGCCGGTAGGCT
TTATCTGTATTGCACCTGTGATGATCCCCAAGCTCTACGGTAAGGGCGCCATCGGTACTATTGGTCACGACAAGGGGACC
AGTGAAGCTTTTTGTATCATGGGCGGTGATCATCGGGATGCGTCAGTACACGAGATTGTGGTGGACGAGGCTAACAAGAT
AGTGAGCACTCCGGCATATATGTTGGCAGGCAACATCGCCGAGGCGCATTCCGGCATCGAAAAGCTGGTCAACAAAGTAC
TGGCGATGGCCTGA

Upstream 100 bases:

>100_bases
CCATGCCAAAGCTGATGAAATAACTTAGCACGATTTTTAATCAGATCAACCAATATGTGATCGCATTGTTAAAACCAAAT
TACATAAGAGGGAATTTTTT

Downstream 100 bases:

>100_bases
CGGGTCTGCAGTTGTCGCCGTCGAGCTGGAACCTTAGCGGCGGCGACTGTCCCATAACCCCTGCAGCAGACCCACTGCGA
GTCCACCCAGGTGGGCGCCA

Product: isoprenoid biosynthesis protein with amidotransferase-like domain

Products: NA

Alternate protein names: Sigma cross-reacting protein 27A; SCRP-27A [H]

Number of amino acids: Translated: 217; Mature: 217

Protein sequence:

>217_residues
MKNIAVLLAGCGVFDGSEIHESVLTLLSLTKAGARFQCFAPDIPQLHVVNHLSGEVAKDEHRNVLVEAARIARGDIKATT
ELNVADFDALIIPGGFGAAKNLCNFALVGADCDVAPEVRDFIAEFALSKKPVGFICIAPVMIPKLYGKGAIGTIGHDKGT
SEAFCIMGGDHRDASVHEIVVDEANKIVSTPAYMLAGNIAEAHSGIEKLVNKVLAMA

Sequences:

>Translated_217_residues
MKNIAVLLAGCGVFDGSEIHESVLTLLSLTKAGARFQCFAPDIPQLHVVNHLSGEVAKDEHRNVLVEAARIARGDIKATT
ELNVADFDALIIPGGFGAAKNLCNFALVGADCDVAPEVRDFIAEFALSKKPVGFICIAPVMIPKLYGKGAIGTIGHDKGT
SEAFCIMGGDHRDASVHEIVVDEANKIVSTPAYMLAGNIAEAHSGIEKLVNKVLAMA
>Mature_217_residues
MKNIAVLLAGCGVFDGSEIHESVLTLLSLTKAGARFQCFAPDIPQLHVVNHLSGEVAKDEHRNVLVEAARIARGDIKATT
ELNVADFDALIIPGGFGAAKNLCNFALVGADCDVAPEVRDFIAEFALSKKPVGFICIAPVMIPKLYGKGAIGTIGHDKGT
SEAFCIMGGDHRDASVHEIVVDEANKIVSTPAYMLAGNIAEAHSGIEKLVNKVLAMA

Specific function: May be involved in the early steps of isoprenoid biosynthesis [H]

COG id: COG3155

COG function: function code Q; Uncharacterized protein involved in an early stage of isoprenoid biosynthesis

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the ES1 family [H]

Homologues:

Organism=Homo sapiens, GI296531406, Length=223, Percent_Identity=45.7399103139013, Blast_Score=197, Evalue=6e-51,
Organism=Homo sapiens, GI296531408, Length=223, Percent_Identity=39.9103139013453, Blast_Score=156, Evalue=2e-38,
Organism=Escherichia coli, GI87082228, Length=217, Percent_Identity=56.221198156682, Blast_Score=243, Evalue=1e-65,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR002818 [H]

Pfam domain/function: PF01965 DJ-1_PfpI [H]

EC number: NA

Molecular weight: Translated: 22848; Mature: 22848

Theoretical pI: Translated: 5.82; Mature: 5.82

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.8 %Cys     (Translated Protein)
2.3 %Met     (Translated Protein)
5.1 %Cys+Met (Translated Protein)
2.8 %Cys     (Mature Protein)
2.3 %Met     (Mature Protein)
5.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKNIAVLLAGCGVFDGSEIHESVLTLLSLTKAGARFQCFAPDIPQLHVVNHLSGEVAKDE
CCCEEEEEEECCCCCCHHHHHHHHHHHHHHHCCCEEEEECCCCCCEEHHHHCCCCCCHHH
HRNVLVEAARIARGDIKATTELNVADFDALIIPGGFGAAKNLCNFALVGADCDVAPEVRD
HHHHHHHHHHHHCCCCCEEEECCEECCCEEEEECCCHHHHHHHHEEEECCCCCCCHHHHH
FIAEFALSKKPVGFICIAPVMIPKLYGKGAIGTIGHDKGTSEAFCIMGGDHRDASVHEIV
HHHHHHHCCCCCCEEEEHHHHHHHHHCCCCCCCCCCCCCCCCEEEEECCCCCCCHHHHHH
VDEANKIVSTPAYMLAGNIAEAHSGIEKLVNKVLAMA
HHCCHHHHCCCHHHHHCCHHHHHHHHHHHHHHHHHCC
>Mature Secondary Structure
MKNIAVLLAGCGVFDGSEIHESVLTLLSLTKAGARFQCFAPDIPQLHVVNHLSGEVAKDE
CCCEEEEEEECCCCCCHHHHHHHHHHHHHHHCCCEEEEECCCCCCEEHHHHCCCCCCHHH
HRNVLVEAARIARGDIKATTELNVADFDALIIPGGFGAAKNLCNFALVGADCDVAPEVRD
HHHHHHHHHHHHCCCCCEEEECCEECCCEEEEECCCHHHHHHHHEEEECCCCCCCHHHHH
FIAEFALSKKPVGFICIAPVMIPKLYGKGAIGTIGHDKGTSEAFCIMGGDHRDASVHEIV
HHHHHHHCCCCCCEEEEHHHHHHHHHCCCCCCCCCCCCCCCCEEEEECCCCCCCHHHHHH
VDEANKIVSTPAYMLAGNIAEAHSGIEKLVNKVLAMA
HHCCHHHHCCCHHHHHCCHHHHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9278503; 1575737; 9603997 [H]