Click here to switch to the map view.

The map label for this gene is hemG [H]

Identifier: 119773178

GI number: 119773178

Start: 40332

End: 40865

Strand: Direct

Name: hemG [H]

Synonym: Sama_0036

Alternate gene names: 119773178

Gene position: 40332-40865 (Clockwise)

Preceding gene: 119773177

Following gene: 119773180

Centisome position: 0.94

GC content: 52.25

Gene sequence:

>534_bases
ATGACCCATACCTTGATCCTCTATTCCACCGTGGACGGCCAGACCCGCAAAATATGTGAGCGCATCAAGGCACGCTGTGA
GGCGGCAGGCGAGCAGGTCACAATGGCGGATATCGCTGAGGCAGATGCCCTGCTTGAGACGGCGGATAAGGTATTGGTGG
GGGCCAGCATACGTTACGGTAAACACAGGCCTGCATTGTTTGAGTTTGCCACCAGGTATGGCGCTGTGCTGGGCACAAAA
ATAAACGGTTTTTTTACCGTGAACGTGGTTGCGCGAAAGCCTGAGAAGAACACCCCTGCAACTAACCCCTATATGCAGAA
GTTTTTGCAGCTATCCCAATGGCAGCCACAGCAGTTAGGCGTATTTGCCGGTAAGATTGATTATCCCCGTTACGGCTTAT
TTGACCGTACCATGATCCGCTTTATCATGTGGATCACCAAGGGCCCCACAGATATAAAGGGCACCTTCGAGTTTACCGAC
TGGGACAAGGTTGACGGCTTTGCCGACACTTTTGCTGCCCGCAAAGCACCTTAA

Upstream 100 bases:

>100_bases
GTGATGGCGCCAAGTGGGTACTGGTCGTGGCCATGTTGTTTGGGCGGCTCGAAATCTTTACCCTGTTGGTGCTTTTTACC
CCCACTTTCTGGAGAACCTG

Downstream 100 bases:

>100_bases
AACCAAAGCCGCTTAAACGCTGCAATAGCGTTGGTGCAGGATTGAGATAATTTCAGTGACCTGTTCGTTTTTGAGCTTGT
AGTAGACCAGCTGCGAGCTC

Product: protoporphyrinogen oxidase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 177; Mature: 176

Protein sequence:

>177_residues
MTHTLILYSTVDGQTRKICERIKARCEAAGEQVTMADIAEADALLETADKVLVGASIRYGKHRPALFEFATRYGAVLGTK
INGFFTVNVVARKPEKNTPATNPYMQKFLQLSQWQPQQLGVFAGKIDYPRYGLFDRTMIRFIMWITKGPTDIKGTFEFTD
WDKVDGFADTFAARKAP

Sequences:

>Translated_177_residues
MTHTLILYSTVDGQTRKICERIKARCEAAGEQVTMADIAEADALLETADKVLVGASIRYGKHRPALFEFATRYGAVLGTK
INGFFTVNVVARKPEKNTPATNPYMQKFLQLSQWQPQQLGVFAGKIDYPRYGLFDRTMIRFIMWITKGPTDIKGTFEFTD
WDKVDGFADTFAARKAP
>Mature_176_residues
THTLILYSTVDGQTRKICERIKARCEAAGEQVTMADIAEADALLETADKVLVGASIRYGKHRPALFEFATRYGAVLGTKI
NGFFTVNVVARKPEKNTPATNPYMQKFLQLSQWQPQQLGVFAGKIDYPRYGLFDRTMIRFIMWITKGPTDIKGTFEFTDW
DKVDGFADTFAARKAP

Specific function: Catalyzes the 6-electron oxidation of protoporphyrinogen-IX to form protoporphyrin-IX using menaquinone as electron acceptor [H]

COG id: COG4635

COG function: function code CH; Flavodoxin

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 flavodoxin-like domain [H]

Homologues:

Organism=Escherichia coli, GI1790285, Length=170, Percent_Identity=43.5294117647059, Blast_Score=152, Evalue=2e-38,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR008254
- InterPro:   IPR001226 [H]

Pfam domain/function: PF00258 Flavodoxin_1 [H]

EC number: =1.3.5.3 [H]

Molecular weight: Translated: 19953; Mature: 19822

Theoretical pI: Translated: 9.60; Mature: 9.60

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.1 %Cys     (Translated Protein)
2.8 %Met     (Translated Protein)
4.0 %Cys+Met (Translated Protein)
1.1 %Cys     (Mature Protein)
2.3 %Met     (Mature Protein)
3.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTHTLILYSTVDGQTRKICERIKARCEAAGEQVTMADIAEADALLETADKVLVGASIRYG
CCCEEEEEEECCCHHHHHHHHHHHHHHHCCCEEEHHHHHHHHHHHHHHHHHHCCCEECCC
KHRPALFEFATRYGAVLGTKINGFFTVNVVARKPEKNTPATNPYMQKFLQLSQWQPQQLG
CCCCHHHHHHHHHHHHHCCEECCEEEEEEEEECCCCCCCCCCHHHHHHHHHHCCCCHHHC
VFAGKIDYPRYGLFDRTMIRFIMWITKGPTDIKGTFEFTDWDKVDGFADTFAARKAP
EEECCCCCCCCCCHHHHHHHHHHHHCCCCCCCCEEEEECCCCCCCCHHHHHHHCCCC
>Mature Secondary Structure 
THTLILYSTVDGQTRKICERIKARCEAAGEQVTMADIAEADALLETADKVLVGASIRYG
CCEEEEEEECCCHHHHHHHHHHHHHHHCCCEEEHHHHHHHHHHHHHHHHHHCCCEECCC
KHRPALFEFATRYGAVLGTKINGFFTVNVVARKPEKNTPATNPYMQKFLQLSQWQPQQLG
CCCCHHHHHHHHHHHHHCCEECCEEEEEEEEECCCCCCCCCCHHHHHHHHHHCCCCHHHC
VFAGKIDYPRYGLFDRTMIRFIMWITKGPTDIKGTFEFTDWDKVDGFADTFAARKAP
EEECCCCCCCCCCHHHHHHHHHHHHCCCCCCCCEEEEECCCCCCCCHHHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 11206551; 11258796 [H]