| Definition | Shewanella amazonensis SB2B chromosome, complete genome. |
|---|---|
| Accession | NC_008700 |
| Length | 4,306,142 |
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The map label for this gene is tusA [H]
Identifier: 119773171
GI number: 119773171
Start: 30571
End: 30870
Strand: Reverse
Name: tusA [H]
Synonym: Sama_0029
Alternate gene names: 119773171
Gene position: 30870-30571 (Counterclockwise)
Preceding gene: 119773173
Following gene: 119773170
Centisome position: 0.72
GC content: 47.0
Gene sequence:
>300_bases ATGACTGGAGTAAAATTTGCCCCAATGACCATTGCTCTCTTTTCTAGATCTCTTATGAACAATATTTTTGCCGAAGCCGA TAAACAACTCGACGCTCTGGGACTACGCTGCCCGGAACCCGTAATGATGGTACGCAAAACAGTGCGACACATGGCTGATG GCGAAACCCTGCTGATTATCGCTGATGATCCTGCTACCACCAGAGACATTCCAAGCTTTTGCGAGTTTATGGACCATACA CTACTCGCCAGTGATACGTCAGTGACACCCTATCGATACCTGATTAAAAAGGGCCTCTAG
Upstream 100 bases:
>100_bases AAAAGTTGAAATGACTTTTTACACTCTCGTCAGCTGTTCCACGTGGAACATCGACTTTGCGTGATACCGCATAATCCAGT GTTAGCTTGGCGTTGCTGCT
Downstream 100 bases:
>100_bases CCGTGTCCTTGAAGATTATTATTTGAAACAGAAATGAGGTTTTCCTGATCCGGGATTTATGAGATAACAACCTGACGTGC GCTAAGGACTAGCCTGCATG
Product: redox protein regulator of disulfide bond formation
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 99; Mature: 98
Protein sequence:
>99_residues MTGVKFAPMTIALFSRSLMNNIFAEADKQLDALGLRCPEPVMMVRKTVRHMADGETLLIIADDPATTRDIPSFCEFMDHT LLASDTSVTPYRYLIKKGL
Sequences:
>Translated_99_residues MTGVKFAPMTIALFSRSLMNNIFAEADKQLDALGLRCPEPVMMVRKTVRHMADGETLLIIADDPATTRDIPSFCEFMDHT LLASDTSVTPYRYLIKKGL >Mature_98_residues TGVKFAPMTIALFSRSLMNNIFAEADKQLDALGLRCPEPVMMVRKTVRHMADGETLLIIADDPATTRDIPSFCEFMDHTL LASDTSVTPYRYLIKKGL
Specific function: Could be part of a sulfur-relay system [H]
COG id: COG0425
COG function: function code O; Predicted redox protein, regulator of disulfide bond formation
Gene ontology:
Cell location: Cytoplasm [H]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the UPF0033 family. TusA subfamily [H]
Homologues:
Organism=Escherichia coli, GI1789881, Length=80, Percent_Identity=72.5, Blast_Score=125, Evalue=6e-31,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR001455 - InterPro: IPR022931 [H]
Pfam domain/function: PF01206 SirA [H]
EC number: NA
Molecular weight: Translated: 11066; Mature: 10935
Theoretical pI: Translated: 6.51; Mature: 6.51
Prosite motif: PS01148 UPF0033
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.0 %Cys (Translated Protein) 7.1 %Met (Translated Protein) 9.1 %Cys+Met (Translated Protein) 2.0 %Cys (Mature Protein) 6.1 %Met (Mature Protein) 8.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTGVKFAPMTIALFSRSLMNNIFAEADKQLDALGLRCPEPVMMVRKTVRHMADGETLLII CCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHCCCCEEEEE ADDPATTRDIPSFCEFMDHTLLASDTSVTPYRYLIKKGL ECCCCCCCCHHHHHHHHHHHHHCCCCCCCHHHHHHHCCC >Mature Secondary Structure TGVKFAPMTIALFSRSLMNNIFAEADKQLDALGLRCPEPVMMVRKTVRHMADGETLLII CCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHCCCCEEEEE ADDPATTRDIPSFCEFMDHTLLASDTSVTPYRYLIKKGL ECCCCCCCCHHHHHHHHHHHHHCCCCCCCHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA