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The map label for this gene is glyQ

Identifier: 119773168

GI number: 119773168

Start: 25552

End: 26457

Strand: Reverse

Name: glyQ

Synonym: Sama_0026

Alternate gene names: 119773168

Gene position: 26457-25552 (Counterclockwise)

Preceding gene: 119773170

Following gene: 119773167

Centisome position: 0.61

GC content: 55.85

Gene sequence:

>906_bases
ATGACGACGAAATACGACGTAAAGACATTCCAGGGCTTTATTTTGACCCTGCAGGATTACTGGGCTCAGCAAGGCTGTGC
CATTGTCCAACCACTGGATATGGAAGTCGGTGCCGGCACCTTCCACCCTCAGACCTTCCTGCGCGCCCTCGGCCCTGAGC
CAATGAGCAGCGCCTATGTGCAGCCTTCACGCCGCCCAACCGATGGTCGCTACGGTGAAAACCCAAACCGCCTACAGCAC
TACTACCAGTTCCAGGTCGTATTGAAGCCATCCCCTGACAACATTCAGGAGCTCTACTTAGGCTCGCTGCGAGCCTTGGG
CATCGACACCCAAATCCACGACATTCGCTTCGTGGAAGACAACTGGGAATCGCCAACACTGGGCGCCTGGGGTCTGGGTT
GGGAAGTCTGGCTCAACGGCATGGAAGTGACTCAGTTTACCTACTTCCAGCAAGTTGGCGGCATCGAATGCAGCCCAGTG
ACCGGTGAAATCACCTATGGTCTGGAGCGTCTGGCCATGTACATCCAGGGCGTAGACAGCGTTTACGATCTGGTCTGGAC
CGATGGCCCCATGGGCCGCATCACCTATGGCGATGTGTTCCACCAGAACGAAGTTGAACAATCTACCTATAACTTTGAGC
ACGCCGACGTGGACTTCCTGTTCGGCATGTTCGACCAATGCGAAAAAGCCTGTCAGCATTTGTTGTCATTGGAAACTCCT
CTGCCTCTGCCCGCTTACGAGCAAGTCATGAAGGCCTCACACGCTTTCAACCTGCTGGATGCCCGTCACGCCATTTCTGT
GACCGAGCGTCAGCGCTACATTCTGCGTGTGCGCACCATGGCCAAGGCGGTTGCCGAAGCCTACTACAAGGCCCGTGAAG
CCCTCGGCTTCCCCATGTGCAAATAA

Upstream 100 bases:

>100_bases
CCCTATTTAGCCGTAAATTCGCTCAAAAATAGCCTACATAACCACAGATCTACAAGGTATAATCGAACCCATTTTCTATT
TTCAGCTGACAGCAGTAGAC

Downstream 100 bases:

>100_bases
GCAGTGCAAATAAGAGGAAGATTAAATGAAATTTGAAAACCTGCTCATCGAAATTGGTACCGAAGAGCTGCCACCCAAAG
CACTGCGCACCCTGGCCGAA

Product: glycyl-tRNA synthetase subunit alpha

Products: NA

Alternate protein names: Glycine--tRNA ligase alpha subunit; GlyRS

Number of amino acids: Translated: 301; Mature: 300

Protein sequence:

>301_residues
MTTKYDVKTFQGFILTLQDYWAQQGCAIVQPLDMEVGAGTFHPQTFLRALGPEPMSSAYVQPSRRPTDGRYGENPNRLQH
YYQFQVVLKPSPDNIQELYLGSLRALGIDTQIHDIRFVEDNWESPTLGAWGLGWEVWLNGMEVTQFTYFQQVGGIECSPV
TGEITYGLERLAMYIQGVDSVYDLVWTDGPMGRITYGDVFHQNEVEQSTYNFEHADVDFLFGMFDQCEKACQHLLSLETP
LPLPAYEQVMKASHAFNLLDARHAISVTERQRYILRVRTMAKAVAEAYYKAREALGFPMCK

Sequences:

>Translated_301_residues
MTTKYDVKTFQGFILTLQDYWAQQGCAIVQPLDMEVGAGTFHPQTFLRALGPEPMSSAYVQPSRRPTDGRYGENPNRLQH
YYQFQVVLKPSPDNIQELYLGSLRALGIDTQIHDIRFVEDNWESPTLGAWGLGWEVWLNGMEVTQFTYFQQVGGIECSPV
TGEITYGLERLAMYIQGVDSVYDLVWTDGPMGRITYGDVFHQNEVEQSTYNFEHADVDFLFGMFDQCEKACQHLLSLETP
LPLPAYEQVMKASHAFNLLDARHAISVTERQRYILRVRTMAKAVAEAYYKAREALGFPMCK
>Mature_300_residues
TTKYDVKTFQGFILTLQDYWAQQGCAIVQPLDMEVGAGTFHPQTFLRALGPEPMSSAYVQPSRRPTDGRYGENPNRLQHY
YQFQVVLKPSPDNIQELYLGSLRALGIDTQIHDIRFVEDNWESPTLGAWGLGWEVWLNGMEVTQFTYFQQVGGIECSPVT
GEITYGLERLAMYIQGVDSVYDLVWTDGPMGRITYGDVFHQNEVEQSTYNFEHADVDFLFGMFDQCEKACQHLLSLETPL
PLPAYEQVMKASHAFNLLDARHAISVTERQRYILRVRTMAKAVAEAYYKAREALGFPMCK

Specific function: Unknown

COG id: COG0752

COG function: function code J; Glycyl-tRNA synthetase, alpha subunit

Gene ontology:

Cell location: Cytoplasm

Metaboloic importance: Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the class-II aminoacyl-tRNA synthetase family

Homologues:

Organism=Escherichia coli, GI1789983, Length=298, Percent_Identity=84.2281879194631, Blast_Score=544, Evalue=1e-156,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): SYGA_SHEAM (A1S1I2)

Other databases:

- EMBL:   CP000507
- RefSeq:   YP_925908.1
- ProteinModelPortal:   A1S1I2
- SMR:   A1S1I2
- STRING:   A1S1I2
- GeneID:   4602283
- GenomeReviews:   CP000507_GR
- KEGG:   saz:Sama_0026
- NMPDR:   fig|326297.7.peg.23
- eggNOG:   COG0752
- HOGENOM:   HBG285316
- OMA:   CRRPTDG
- PhylomeDB:   A1S1I2
- ProtClustDB:   PRK09348
- GO:   GO:0005737
- HAMAP:   MF_00254
- InterPro:   IPR006194
- InterPro:   IPR002310
- PRINTS:   PR01044
- TIGRFAMs:   TIGR00388

Pfam domain/function: PF02091 tRNA-synt_2e

EC number: =6.1.1.14

Molecular weight: Translated: 34385; Mature: 34254

Theoretical pI: Translated: 4.80; Mature: 4.80

Prosite motif: PS50861 AA_TRNA_LIGASE_II_GLYAB

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.7 %Cys     (Translated Protein)
3.3 %Met     (Translated Protein)
5.0 %Cys+Met (Translated Protein)
1.7 %Cys     (Mature Protein)
3.0 %Met     (Mature Protein)
4.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTTKYDVKTFQGFILTLQDYWAQQGCAIVQPLDMEVGAGTFHPQTFLRALGPEPMSSAYV
CCCCCCHHHHHHHHHHHHHHHHHCCCEEECCCCCCCCCCCCCHHHHHHHHCCCCCCCCCC
QPSRRPTDGRYGENPNRLQHYYQFQVVLKPSPDNIQELYLGSLRALGIDTQIHDIRFVED
CCCCCCCCCCCCCCHHHHEEEEEEEEEEECCCCCHHHHHHHHHHHCCCCCEEEEEEEECC
NWESPTLGAWGLGWEVWLNGMEVTQFTYFQQVGGIECSPVTGEITYGLERLAMYIQGVDS
CCCCCCCCCCCCCHHHHCCCCHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHH
VYDLVWTDGPMGRITYGDVFHQNEVEQSTYNFEHADVDFLFGMFDQCEKACQHLLSLETP
HHHHHCCCCCCCCEEECHHHCCCHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCC
LPLPAYEQVMKASHAFNLLDARHAISVTERQRYILRVRTMAKAVAEAYYKAREALGFPMC
CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCC
K
C
>Mature Secondary Structure 
TTKYDVKTFQGFILTLQDYWAQQGCAIVQPLDMEVGAGTFHPQTFLRALGPEPMSSAYV
CCCCCHHHHHHHHHHHHHHHHHCCCEEECCCCCCCCCCCCCHHHHHHHHCCCCCCCCCC
QPSRRPTDGRYGENPNRLQHYYQFQVVLKPSPDNIQELYLGSLRALGIDTQIHDIRFVED
CCCCCCCCCCCCCCHHHHEEEEEEEEEEECCCCCHHHHHHHHHHHCCCCCEEEEEEEECC
NWESPTLGAWGLGWEVWLNGMEVTQFTYFQQVGGIECSPVTGEITYGLERLAMYIQGVDS
CCCCCCCCCCCCCHHHHCCCCHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHH
VYDLVWTDGPMGRITYGDVFHQNEVEQSTYNFEHADVDFLFGMFDQCEKACQHLLSLETP
HHHHHCCCCCCCCEEECHHHCCCHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCC
LPLPAYEQVMKASHAFNLLDARHAISVTERQRYILRVRTMAKAVAEAYYKAREALGFPMC
CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCC
K
C

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA